RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 FOXD3Q9UJU5 478 aaPredicted RBP15.11■□□□□ 0.01
CD9-209ENST00000540891 CLEC4AQ9UMR7 237 aa15.11■□□□□ 0.01
CD9-209ENST00000540891 CORO2BQ9UQ03 480 aa15.11■□□□□ 0.01
CD9-209ENST00000540891 EVPLLA8MZ36 301 aa15.1■□□□□ 0.01
CD9-209ENST00000540891 FXYD1O00168 92 aa15.1■□□□□ 0.01
CD9-209ENST00000540891 SS18L1O75177 396 aaPredicted RBP15.1■□□□□ 0.01
CD9-209ENST00000540891 SYNGR4O95473 234 aa15.1■□□□□ 0.01
CD9-209ENST00000540891 GKN3PP0CG01 181 aa15.1■□□□□ 0.01
CD9-209ENST00000540891 PRG2P13727 222 aa15.1■□□□□ 0.01
CD9-209ENST00000540891 ETS2P15036 469 aa15.1■□□□□ 0.01
CD9-209ENST00000540891 KLK2P20151 261 aa15.1■□□□□ 0.01
CD9-209ENST00000540891 APOBEC1P41238 236 aaKnown RBP15.1■□□□□ 0.01
CD9-209ENST00000540891 CAPRIN1Q14444 709 aaKnown RBP15.1■□□□□ 0.01
CD9-209ENST00000540891 LARS2Q15031 903 aaKnown RBP15.1■□□□□ 0.01
CD9-209ENST00000540891 SYT14P1Q58G82 188 aa15.1■□□□□ 0.01
CD9-209ENST00000540891 ZNF311Q5JNZ3 666 aa15.1■□□□□ 0.01
CD9-209ENST00000540891 COMTD1Q86VU5 262 aa15.1■□□□□ 0.01
CD9-209ENST00000540891 RNF128Q8TEB7 428 aa15.1■□□□□ 0.01
CD9-209ENST00000540891 CPNE4Q96A23 557 aaPredicted RBP15.1■□□□□ 0.01
CD9-209ENST00000540891 RBM24Q9BX46 236 aaKnown RBP15.1■□□□□ 0.01
CD9-209ENST00000540891 PRRG4Q9BZD6 226 aa15.1■□□□□ 0.01
CD9-209ENST00000540891 OPN3Q9H1Y3 402 aaPredicted RBP15.1■□□□□ 0.01
CD9-209ENST00000540891 GALNT8Q9NY28 637 aa15.1■□□□□ 0.01
CD9-209ENST00000540891 CHRNA9Q9UGM1 479 aa15.1■□□□□ 0.01
CD9-209ENST00000540891 IFT52Q9Y366 437 aa15.1■□□□□ 0.01
CD9-209ENST00000540891 CENPEQ02224 2701 aa15.09■□□□□ 0.01
CD9-209ENST00000540891 C5orf58C9J3I9 102 aa15.09■□□□□ 0.01
CD9-209ENST00000540891 MSTNO14793 375 aa15.09■□□□□ 0.01
CD9-209ENST00000540891 ENPP1P22413 925 aa15.09■□□□□ 0.01
CD9-209ENST00000540891 SLC7A1P30825 629 aa15.09■□□□□ 0.01
CD9-209ENST00000540891 SEC24CP53992 1094 aa15.09■□□□□ 0.01
CD9-209ENST00000540891 SCARB2Q14108 478 aa15.09■□□□□ 0.01
CD9-209ENST00000540891 REEP3Q6NUK4 255 aa15.09■□□□□ 0.01
CD9-209ENST00000540891 ZNF474Q6S9Z5 364 aaPredicted RBP15.09■□□□□ 0.01
CD9-209ENST00000540891 FAM214BQ7L5A3 538 aa15.09■□□□□ 0.01
CD9-209ENST00000540891 SERPINA11Q86U17 422 aa15.09■□□□□ 0.01
CD9-209ENST00000540891 ZNF440Q8IYI8 595 aa15.09■□□□□ 0.01
CD9-209ENST00000540891 ABHD3Q8WU67 409 aa15.09■□□□□ 0.01
CD9-209ENST00000540891 LRRC46Q96FV0 321 aa15.09■□□□□ 0.01
CD9-209ENST00000540891 GMPPAQ96IJ6 420 aaPredicted RBP15.09■□□□□ 0.01
CD9-209ENST00000540891 OR5B2Q96R09 309 aa15.09■□□□□ 0.01
CD9-209ENST00000540891 SLC39A3Q9BRY0 314 aa15.09■□□□□ 0.01
CD9-209ENST00000540891 KAT8Q9H7Z6 458 aaKnown RBP15.09■□□□□ 0.01
CD9-209ENST00000540891 SERINC1Q9NRX5 453 aa15.09■□□□□ 0.01
CD9-209ENST00000540891 MRGBPQ9NV56 204 aa15.09■□□□□ 0.01
CD9-209ENST00000540891 CRIM1Q9NZV1 1036 aa15.09■□□□□ 0.01
CD9-209ENST00000540891 KCNN3Q9UGI6 736 aa15.09■□□□□ 0.01
CD9-209ENST00000540891 OSGIN1Q9UJX0 560 aa15.09■□□□□ 0.01
CD9-209ENST00000540891 ZNF232Q9UNY5 417 aa15.09■□□□□ 0.01
CD9-209ENST00000540891 ITPR2Q14571 2701 aa15.08■□□□□ 0.01
CD9-209ENST00000540891 IGHV3-15A0A0B4J1V0 119 aa15.08■□□□□ 0
CD9-209ENST00000540891 TMEM72A0PK05 275 aa15.08■□□□□ 0
CD9-209ENST00000540891 FRS3O43559 492 aa15.08■□□□□ 0
CD9-209ENST00000540891 SMNDC1O75940 238 aaKnown RBP eCLIP15.08■□□□□ 0
CD9-209ENST00000540891 CD8BP10966 210 aa15.08■□□□□ 0
CD9-209ENST00000540891 TACR3P29371 465 aa15.08■□□□□ 0
CD9-209ENST00000540891 ADSLP30566 484 aaPredicted RBP15.08■□□□□ 0
CD9-209ENST00000540891 SSTR2P30874 369 aa15.08■□□□□ 0
CD9-209ENST00000540891 SLC1A3P43003 542 aa15.08■□□□□ 0
CD9-209ENST00000540891 KRTAP10-9P60411 292 aa15.08■□□□□ 0
CD9-209ENST00000540891 RAC3P60763 192 aa15.08■□□□□ 0
CD9-209ENST00000540891 SORDQ00796 357 aa15.08■□□□□ 0
CD9-209ENST00000540891 TLE4Q04727 773 aa15.08■□□□□ 0
CD9-209ENST00000540891 ZSWIM7Q19AV6 140 aa15.08■□□□□ 0
CD9-209ENST00000540891 TRMT5Q32P41 509 aaKnown RBP15.08■□□□□ 0
CD9-209ENST00000540891 COQ5Q5HYK3 327 aa15.08■□□□□ 0
CD9-209ENST00000540891 REP15Q6BDI9 236 aa15.08■□□□□ 0
CD9-209ENST00000540891 TMPPEQ6ZT21 453 aa15.08■□□□□ 0
CD9-209ENST00000540891 NET1Q7Z628 596 aaPredicted RBP15.08■□□□□ 0
CD9-209ENST00000540891 SNX32Q86XE0 403 aa15.08■□□□□ 0
CD9-209ENST00000540891 ZNF610Q8N9Z0 462 aa15.08■□□□□ 0
CD9-209ENST00000540891 SLC25A43Q8WUT9 341 aaPredicted RBP15.08■□□□□ 0
CD9-209ENST00000540891 ARL5BQ96KC2 179 aa15.08■□□□□ 0
CD9-209ENST00000540891 OR11A1Q9GZK7 315 aa15.08■□□□□ 0
CD9-209ENST00000540891 ADAM19Q9H013 955 aa15.08■□□□□ 0
CD9-209ENST00000540891 TIGARQ9NQ88 270 aa15.08■□□□□ 0
CD9-209ENST00000540891 ARMCX1Q9P291 453 aa15.08■□□□□ 0
CD9-209ENST00000540891 ING1Q9UK53 422 aaPredicted RBP15.08■□□□□ 0
CD9-209ENST00000540891 MAST4O15021 2626 aa15.07■□□□□ 0
CD9-209ENST00000540891 TMED7-TICAM2A0A0A6YYA0 188 aa15.07■□□□□ 0
CD9-209ENST00000540891 LOC100653049A0A140TA62 436 aa15.07■□□□□ 0
CD9-209ENST00000540891 SMAD9O15198 467 aaKnown RBP15.07■□□□□ 0
CD9-209ENST00000540891 TPST1O60507 370 aa15.07■□□□□ 0
CD9-209ENST00000540891 GCM2O75603 506 aaPredicted RBP15.07■□□□□ 0
CD9-209ENST00000540891 KRT34O76011 436 aa15.07■□□□□ 0
CD9-209ENST00000540891 CCNA2P20248 432 aa15.07■□□□□ 0
CD9-209ENST00000540891 SLC6A2P23975 617 aa15.07■□□□□ 0
CD9-209ENST00000540891 AQP1P29972 269 aa15.07■□□□□ 0
CD9-209ENST00000540891 AGTR1P30556 359 aa15.07■□□□□ 0
CD9-209ENST00000540891 PRKAR1BP31321 381 aa15.07■□□□□ 0
CD9-209ENST00000540891 PEX19P40855 299 aa15.07■□□□□ 0
CD9-209ENST00000540891 KIR2DL3P43628 341 aa15.07■□□□□ 0
CD9-209ENST00000540891 HTR3AP46098 478 aa15.07■□□□□ 0
CD9-209ENST00000540891 CPA2P48052 419 aa15.07■□□□□ 0
CD9-209ENST00000540891 DIO1P49895 249 aa15.07■□□□□ 0
CD9-209ENST00000540891 GZMMP51124 257 aa15.07■□□□□ 0
CD9-209ENST00000540891 POLR2HP52434 150 aaKnown RBP15.07■□□□□ 0
CD9-209ENST00000540891 GYS2P54840 703 aa15.07■□□□□ 0
CD9-209ENST00000540891 PCBP3P57721 371 aaKnown RBP15.07■□□□□ 0
CD9-209ENST00000540891 GLIPR1L2Q4G1C9 344 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms