RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 ERCC6LQ2NKX8 1250 aa4.01□□□□□ -1.77
SNHG1-214ENST00000540865 ZNF628Q5EBL2 1059 aa4.01□□□□□ -1.77
SNHG1-214ENST00000540865 CCNYL2Q5T2Q4 361 aa4.01□□□□□ -1.77
SNHG1-214ENST00000540865 C1QTNF12Q5T7M4 302 aa4.01□□□□□ -1.77
SNHG1-214ENST00000540865 SHQ1Q6PI26 577 aaKnown RBP4.01□□□□□ -1.77
SNHG1-214ENST00000540865 RAD9BQ6WBX8 426 aa4.01□□□□□ -1.77
SNHG1-214ENST00000540865 PAGE2Q7Z2X7 111 aa4.01□□□□□ -1.77
SNHG1-214ENST00000540865 MARCH3Q86UD3 253 aa4.01□□□□□ -1.77
SNHG1-214ENST00000540865 TRABD2AQ86V40 505 aa4.01□□□□□ -1.77
SNHG1-214ENST00000540865 ZC3HC1Q86WB0 502 aaKnown RBP4.01□□□□□ -1.77
SNHG1-214ENST00000540865 SPATA6LQ8N4H0 392 aa4.01□□□□□ -1.77
SNHG1-214ENST00000540865 ZNF433Q8N7K0 673 aaPredicted RBP4.01□□□□□ -1.77
SNHG1-214ENST00000540865 OR4N2Q8NGD1 307 aa4.01□□□□□ -1.77
SNHG1-214ENST00000540865 WDR20Q8TBZ3 569 aa4.01□□□□□ -1.77
SNHG1-214ENST00000540865 ACTRT2Q8TDY3 377 aa4.01□□□□□ -1.77
SNHG1-214ENST00000540865 TRPC4APQ8TEL6 797 aa4.01□□□□□ -1.77
SNHG1-214ENST00000540865 UBTD2Q8WUN7 234 aa4.01□□□□□ -1.77
SNHG1-214ENST00000540865 JADE3Q92613 823 aa4.01□□□□□ -1.77
SNHG1-214ENST00000540865 KLHL29Q96CT2 875 aa4.01□□□□□ -1.77
SNHG1-214ENST00000540865 FBXO17Q96EF6 278 aa4.01□□□□□ -1.77
SNHG1-214ENST00000540865 KLHL15Q96M94 604 aa4.01□□□□□ -1.77
SNHG1-214ENST00000540865 ZNF681Q96N22 645 aa4.01□□□□□ -1.77
SNHG1-214ENST00000540865 NAP1L3Q99457 506 aaPredicted RBP4.01□□□□□ -1.77
SNHG1-214ENST00000540865 SERPINI1Q99574 410 aa4.01□□□□□ -1.77
SNHG1-214ENST00000540865 VRK1Q99986 396 aaPredicted RBP4.01□□□□□ -1.77
SNHG1-214ENST00000540865 SUCNR1Q9BXA5 334 aa4.01□□□□□ -1.77
SNHG1-214ENST00000540865 RTN4RQ9BZR6 473 aa4.01□□□□□ -1.77
SNHG1-214ENST00000540865 TSPY26PQ9H489 355 aa4.01□□□□□ -1.77
SNHG1-214ENST00000540865 BCO1Q9HAY6 547 aa4.01□□□□□ -1.77
SNHG1-214ENST00000540865 PLAC1Q9HBJ0 212 aa4.01□□□□□ -1.77
SNHG1-214ENST00000540865 MED29Q9NX70 200 aa4.01□□□□□ -1.77
SNHG1-214ENST00000540865 AHSPQ9NZD4 102 aa4.01□□□□□ -1.77
SNHG1-214ENST00000540865 KLHL9Q9P2J3 617 aa4.01□□□□□ -1.77
SNHG1-214ENST00000540865 OPTCQ9UBM4 332 aa4.01□□□□□ -1.77
SNHG1-214ENST00000540865 FBXO9Q9UK97 447 aaPredicted RBP4.01□□□□□ -1.77
SNHG1-214ENST00000540865 VDAC3Q9Y277 283 aa4.01□□□□□ -1.77
SNHG1-214ENST00000540865 GRIP1Q9Y3R0 1128 aa4.01□□□□□ -1.77
SNHG1-214ENST00000540865 OR10H1Q9Y4A9 318 aa4.01□□□□□ -1.77
SNHG1-214ENST00000540865 GPR45Q9Y5Y3 372 aa4.01□□□□□ -1.77
SNHG1-214ENST00000540865 PTGDR2Q9Y5Y4 395 aa4.01□□□□□ -1.77
SNHG1-214ENST00000540865 SLC25A15Q9Y619 301 aa4.01□□□□□ -1.77
SNHG1-214ENST00000540865 ZNF780BQ9Y6R6 833 aa4.01□□□□□ -1.77
SNHG1-214ENST00000540865 YLPM1P49750 1951 aaKnown RBP4.01□□□□□ -1.77
SNHG1-214ENST00000540865 TENM3Q9P273 2699 aa4.01□□□□□ -1.77
SNHG1-214ENST00000540865 SACSQ9NZJ4 4579 aa4□□□□□ -1.77
SNHG1-214ENST00000540865 DYNC2H1Q8NCM8 4307 aaKnown RBP4□□□□□ -1.77
SNHG1-214ENST00000540865 A0A1W2PRB8 838 aa4□□□□□ -1.77
SNHG1-214ENST00000540865 A0A1W2PRX2 142 aa4□□□□□ -1.77
SNHG1-214ENST00000540865 CIB4A0PJX0 185 aa4□□□□□ -1.77
SNHG1-214ENST00000540865 B9A039 149 aa4□□□□□ -1.77
SNHG1-214ENST00000540865 M0R1B8 84 aa4□□□□□ -1.77
SNHG1-214ENST00000540865 PLOD3O60568 738 aa4□□□□□ -1.77
SNHG1-214ENST00000540865 UGDHO60701 494 aa4□□□□□ -1.77
SNHG1-214ENST00000540865 KERAO60938 352 aa4□□□□□ -1.77
SNHG1-214ENST00000540865 IL33O95760 270 aa4□□□□□ -1.77
SNHG1-214ENST00000540865 ANGPTL1O95841 491 aa4□□□□□ -1.77
SNHG1-214ENST00000540865 OPN1LWP04000 364 aa4□□□□□ -1.77
SNHG1-214ENST00000540865 LTA4HP09960 611 aaKnown RBP4□□□□□ -1.77
SNHG1-214ENST00000540865 MTHFD2P13995 350 aa4□□□□□ -1.77
SNHG1-214ENST00000540865 PGCP20142 388 aa4□□□□□ -1.77
SNHG1-214ENST00000540865 SERPINF1P36955 418 aa4□□□□□ -1.77
SNHG1-214ENST00000540865 EIF1P41567 113 aaKnown RBP4□□□□□ -1.77
SNHG1-214ENST00000540865 IDH3GP51553 393 aaPredicted RBP4□□□□□ -1.77
SNHG1-214ENST00000540865 ZNF41P51814 821 aaPredicted RBP4□□□□□ -1.77
SNHG1-214ENST00000540865 MAPK12P53778 367 aa4□□□□□ -1.77
SNHG1-214ENST00000540865 PSMD4P55036 377 aaKnown RBP4□□□□□ -1.77
SNHG1-214ENST00000540865 UBA52P62987 128 aaKnown RBP4□□□□□ -1.77
SNHG1-214ENST00000540865 PSG6Q00889 435 aa4□□□□□ -1.77
SNHG1-214ENST00000540865 DUSP2Q05923 314 aa4□□□□□ -1.77
SNHG1-214ENST00000540865 RASGEF1BQ0VAM2 473 aa4□□□□□ -1.77
SNHG1-214ENST00000540865 CSTF3Q12996 717 aaKnown RBP4□□□□□ -1.77
SNHG1-214ENST00000540865 MLC1Q15049 377 aa4□□□□□ -1.77
SNHG1-214ENST00000540865 DECR1Q16698 335 aa4□□□□□ -1.77
SNHG1-214ENST00000540865 PLPPR5Q32ZL2 321 aa4□□□□□ -1.77
SNHG1-214ENST00000540865 SH2D4BQ5SQS7 431 aa4□□□□□ -1.77
SNHG1-214ENST00000540865 MBNL2Q5VZF2 373 aaKnown RBP4□□□□□ -1.77
SNHG1-214ENST00000540865 TTC27Q6P3X3 843 aa4□□□□□ -1.77
SNHG1-214ENST00000540865 FCRLAQ7L513 359 aa4□□□□□ -1.77
SNHG1-214ENST00000540865 SLC46A3Q7Z3Q1 461 aa4□□□□□ -1.77
SNHG1-214ENST00000540865 MYLK4Q86YV6 388 aaPredicted RBP4□□□□□ -1.77
SNHG1-214ENST00000540865 SAMD14Q8IZD0 417 aaPredicted RBP4□□□□□ -1.77
SNHG1-214ENST00000540865 ZNF786Q8N393 782 aa4□□□□□ -1.77
SNHG1-214ENST00000540865 SVOPLQ8N434 492 aa4□□□□□ -1.77
SNHG1-214ENST00000540865 TEX9Q8N6V9 391 aa4□□□□□ -1.77
SNHG1-214ENST00000540865 CEP112Q8N8E3 955 aa4□□□□□ -1.77
SNHG1-214ENST00000540865 ZDHHC22Q8N966 263 aa4□□□□□ -1.77
SNHG1-214ENST00000540865 L3MBTL4Q8NA19 623 aa4□□□□□ -1.77
SNHG1-214ENST00000540865 TOR1AIP2Q8NFQ8 470 aa4□□□□□ -1.77
SNHG1-214ENST00000540865 OR52N5Q8NH56 324 aa4□□□□□ -1.77
SNHG1-214ENST00000540865 STAG3L4Q8TBR4 150 aa4□□□□□ -1.77
SNHG1-214ENST00000540865 TMEM186Q96B77 213 aa4□□□□□ -1.77
SNHG1-214ENST00000540865 CNRIP1Q96F85 164 aaPredicted RBP4□□□□□ -1.77
SNHG1-214ENST00000540865 RNF145Q96MT1 663 aa4□□□□□ -1.77
SNHG1-214ENST00000540865 WWC2-AS2Q96NR7 200 aa4□□□□□ -1.77
SNHG1-214ENST00000540865 MUS81Q96NY9 551 aa4□□□□□ -1.77
SNHG1-214ENST00000540865 SNX18Q96RF0 628 aa4□□□□□ -1.77
SNHG1-214ENST00000540865 PSD2Q9BQI7 771 aa4□□□□□ -1.77
SNHG1-214ENST00000540865 FAIM2Q9BWQ8 316 aa4□□□□□ -1.77
SNHG1-214ENST00000540865 SRXN1Q9BYN0 137 aa4□□□□□ -1.77
SNHG1-214ENST00000540865 TBL1XR1Q9BZK7 514 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms