RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 H3F3CQ6NXT2 135 aa13□□□□□ -0.33
CYB561A3-216ENST00000540755 TMEM81Q6P7N7 255 aa13□□□□□ -0.33
CYB561A3-216ENST00000540755 OPN5Q6U736 354 aa13□□□□□ -0.33
CYB561A3-216ENST00000540755 RPS19BP1Q86WX3 136 aaKnown RBP13□□□□□ -0.33
CYB561A3-216ENST00000540755 IL22RA1Q8N6P7 574 aa13□□□□□ -0.33
CYB561A3-216ENST00000540755 LSM14AQ8ND56 463 aaKnown RBP13□□□□□ -0.33
CYB561A3-216ENST00000540755 OR5W2Q8NH69 310 aa13□□□□□ -0.33
CYB561A3-216ENST00000540755 RNF217Q8TC41 542 aa13□□□□□ -0.33
CYB561A3-216ENST00000540755 C3orf49Q96BT1 292 aa13□□□□□ -0.33
CYB561A3-216ENST00000540755 GPA33Q99795 319 aa13□□□□□ -0.33
CYB561A3-216ENST00000540755 ING2Q9H160 280 aa13□□□□□ -0.33
CYB561A3-216ENST00000540755 C12orf10Q9HB07 376 aa13□□□□□ -0.33
CYB561A3-216ENST00000540755 TMEM5Q9Y2B1 443 aa13□□□□□ -0.33
CYB561A3-216ENST00000540755 MED31Q9Y3C7 131 aa13□□□□□ -0.33
CYB561A3-216ENST00000540755 A0A087WUJ7 227 aa12.99□□□□□ -0.33
CYB561A3-216ENST00000540755 A0A087WXM4 84 aa12.99□□□□□ -0.33
CYB561A3-216ENST00000540755 TP53I11O14683 189 aa12.99□□□□□ -0.33
CYB561A3-216ENST00000540755 KLK10O43240 276 aa12.99□□□□□ -0.33
CYB561A3-216ENST00000540755 PIP5K1CO60331 668 aa12.99□□□□□ -0.33
CYB561A3-216ENST00000540755 TP53P04637 393 aaPredicted RBP12.99□□□□□ -0.33
CYB561A3-216ENST00000540755 LIPCP11150 499 aa12.99□□□□□ -0.33
CYB561A3-216ENST00000540755 PGCP20142 388 aa12.99□□□□□ -0.33
CYB561A3-216ENST00000540755 SOX3P41225 446 aa12.99□□□□□ -0.33
CYB561A3-216ENST00000540755 IDH2P48735 452 aaKnown RBP12.99□□□□□ -0.33
CYB561A3-216ENST00000540755 GAS1P54826 345 aa12.99□□□□□ -0.33
CYB561A3-216ENST00000540755 SUMO3P55854 103 aaPredicted RBP12.99□□□□□ -0.33
CYB561A3-216ENST00000540755 CTBP2P56545 445 aa12.99□□□□□ -0.33
CYB561A3-216ENST00000540755 TMPRSS3P57727 454 aa12.99□□□□□ -0.33
CYB561A3-216ENST00000540755 CD47Q08722 323 aa12.99□□□□□ -0.33
CYB561A3-216ENST00000540755 C17orf67Q0P5P2 114 aa12.99□□□□□ -0.33
CYB561A3-216ENST00000540755 Q0VFX4 171 aa12.99□□□□□ -0.33
CYB561A3-216ENST00000540755 CBFBQ13951 182 aa12.99□□□□□ -0.33
CYB561A3-216ENST00000540755 PTGES3Q15185 160 aaKnown RBP12.99□□□□□ -0.33
CYB561A3-216ENST00000540755 RBM48Q5RL73 367 aaKnown RBP12.99□□□□□ -0.33
CYB561A3-216ENST00000540755 RASSF6Q6ZTQ3 369 aa12.99□□□□□ -0.33
CYB561A3-216ENST00000540755 CCDC71Q8IV32 467 aaPredicted RBP12.99□□□□□ -0.33
CYB561A3-216ENST00000540755 DEPDC4Q8N2C3 294 aa12.99□□□□□ -0.33
CYB561A3-216ENST00000540755 OR5M3Q8NGP4 307 aa12.99□□□□□ -0.33
CYB561A3-216ENST00000540755 B4GALNT2Q8NHY0 566 aa12.99□□□□□ -0.33
CYB561A3-216ENST00000540755 ZNF563Q8TA94 476 aa12.99□□□□□ -0.33
CYB561A3-216ENST00000540755 SNRNP27Q8WVK2 155 aaKnown RBP12.99□□□□□ -0.33
CYB561A3-216ENST00000540755 SH3YL1Q96HL8 342 aaPredicted RBP12.99□□□□□ -0.33
CYB561A3-216ENST00000540755 FAM46AQ96IP4 442 aaKnown RBP12.99□□□□□ -0.33
CYB561A3-216ENST00000540755 SECISBP2Q96T21 854 aaKnown RBP12.99□□□□□ -0.33
CYB561A3-216ENST00000540755 CDCP1Q9H5V8 836 aa12.99□□□□□ -0.33
CYB561A3-216ENST00000540755 HHATLQ9HCP6 504 aa12.99□□□□□ -0.33
CYB561A3-216ENST00000540755 IL17BQ9UHF5 180 aa12.99□□□□□ -0.33
CYB561A3-216ENST00000540755 MRPS18BQ9Y676 258 aaKnown RBP12.99□□□□□ -0.33
CYB561A3-216ENST00000540755 TLN1Q9Y490 2541 aaKnown RBP12.99□□□□□ -0.33
CYB561A3-216ENST00000540755 PCNX3Q9H6A9 2034 aa12.99□□□□□ -0.33
CYB561A3-216ENST00000540755 BOD1L1Q8NFC6 3051 aa12.99□□□□□ -0.33
CYB561A3-216ENST00000540755 SPTA1P02549 2419 aa12.98□□□□□ -0.33
CYB561A3-216ENST00000540755 PNMTP11086 282 aa12.98□□□□□ -0.33
CYB561A3-216ENST00000540755 SLC1A3P43003 542 aa12.98□□□□□ -0.33
CYB561A3-216ENST00000540755 SSR4P51571 173 aa12.98□□□□□ -0.33
CYB561A3-216ENST00000540755 UCNP55089 124 aa12.98□□□□□ -0.33
CYB561A3-216ENST00000540755 IL5RAQ01344 420 aa12.98□□□□□ -0.33
CYB561A3-216ENST00000540755 Q6ZPB1 254 aaPredicted RBP12.98□□□□□ -0.33
CYB561A3-216ENST00000540755 ATG4DQ86TL0 474 aaPredicted RBP12.98□□□□□ -0.33
CYB561A3-216ENST00000540755 CDK20Q8IZL9 346 aa12.98□□□□□ -0.33
CYB561A3-216ENST00000540755 ZNF786Q8N393 782 aa12.98□□□□□ -0.33
CYB561A3-216ENST00000540755 ZNF843Q8N446 348 aa12.98□□□□□ -0.33
CYB561A3-216ENST00000540755 CLDN22Q8N7P3 220 aa12.98□□□□□ -0.33
CYB561A3-216ENST00000540755 TSPAN14Q8NG11 270 aa12.98□□□□□ -0.33
CYB561A3-216ENST00000540755 OR10G3Q8NGC4 313 aa12.98□□□□□ -0.33
CYB561A3-216ENST00000540755 PFN4Q8NHR9 129 aa12.98□□□□□ -0.33
CYB561A3-216ENST00000540755 ASB15Q8WXK1 588 aa12.98□□□□□ -0.33
CYB561A3-216ENST00000540755 KIAA1143Q96AT1 154 aaPredicted RBP12.98□□□□□ -0.33
CYB561A3-216ENST00000540755 SLC19A3Q9BZV2 496 aa12.98□□□□□ -0.33
CYB561A3-216ENST00000540755 GPN2Q9H9Y4 310 aaPredicted RBP12.98□□□□□ -0.33
CYB561A3-216ENST00000540755 SDHAF3Q9NRP4 125 aa12.98□□□□□ -0.33
CYB561A3-216ENST00000540755 KLRF1Q9NZS2 232 aa12.98□□□□□ -0.33
CYB561A3-216ENST00000540755 CNIH4Q9P003 139 aa12.98□□□□□ -0.33
CYB561A3-216ENST00000540755 BLOC1S6Q9UL45 172 aa12.98□□□□□ -0.33
CYB561A3-216ENST00000540755 IGLV3-32A0A0A0MS00 114 aa12.97□□□□□ -0.33
CYB561A3-216ENST00000540755 HTR3EA5X5Y0 456 aa12.97□□□□□ -0.33
CYB561A3-216ENST00000540755 TRIM64CA6NLI5 447 aa12.97□□□□□ -0.33
CYB561A3-216ENST00000540755 H3BN98 237 aa12.97□□□□□ -0.33
CYB561A3-216ENST00000540755 MAN1A2O60476 641 aa12.97□□□□□ -0.33
CYB561A3-216ENST00000540755 SOX14O95416 240 aa12.97□□□□□ -0.33
CYB561A3-216ENST00000540755 IGF2P01344 180 aa12.97□□□□□ -0.33
CYB561A3-216ENST00000540755 IFI30P13284 250 aa12.97□□□□□ -0.33
CYB561A3-216ENST00000540755 MST1P26927 711 aa12.97□□□□□ -0.33
CYB561A3-216ENST00000540755 PTGDSP41222 190 aa12.97□□□□□ -0.33
CYB561A3-216ENST00000540755 GPR4P46093 362 aa12.97□□□□□ -0.33
CYB561A3-216ENST00000540755 CSNK2BP67870 215 aa12.97□□□□□ -0.33
CYB561A3-216ENST00000540755 C19orf57Q0VDD7 668 aa12.97□□□□□ -0.33
CYB561A3-216ENST00000540755 CLN3Q13286 438 aa12.97□□□□□ -0.33
CYB561A3-216ENST00000540755 CDK5R2Q13319 367 aa12.97□□□□□ -0.33
CYB561A3-216ENST00000540755 SNTA1Q13424 505 aa12.97□□□□□ -0.33
CYB561A3-216ENST00000540755 ATP1A4Q13733 1029 aa12.97□□□□□ -0.33
CYB561A3-216ENST00000540755 APOFQ13790 326 aa12.97□□□□□ -0.33
CYB561A3-216ENST00000540755 MAD2L1BPQ15013 274 aaPredicted RBP12.97□□□□□ -0.33
CYB561A3-216ENST00000540755 MEP1AQ16819 746 aa12.97□□□□□ -0.33
CYB561A3-216ENST00000540755 CTU2Q2VPK5 515 aaKnown RBP12.97□□□□□ -0.33
CYB561A3-216ENST00000540755 SLX4IPQ5VYV7 408 aa12.97□□□□□ -0.33
CYB561A3-216ENST00000540755 JMJD6Q6NYC1 403 aaPredicted RBP12.97□□□□□ -0.33
CYB561A3-216ENST00000540755 TMPRSS11FQ6ZWK6 438 aa12.97□□□□□ -0.33
CYB561A3-216ENST00000540755 DUSP19Q8WTR2 217 aa12.97□□□□□ -0.33
CYB561A3-216ENST00000540755 HDAC2Q92769 488 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms