RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 SSX6Q7RTT6 188 aa11.36□□□□□ -0.59
NPC1-202ENST00000540608 CYB561A3Q8NBI2 242 aa11.36□□□□□ -0.59
NPC1-202ENST00000540608 OR51A7Q8NH64 312 aa11.36□□□□□ -0.59
NPC1-202ENST00000540608 THAP4Q8WY91 577 aa11.36□□□□□ -0.59
NPC1-202ENST00000540608 SMIM10Q96HG1 83 aa11.36□□□□□ -0.59
NPC1-202ENST00000540608 RSPH9Q9H1X1 276 aaPredicted RBP11.36□□□□□ -0.59
NPC1-202ENST00000540608 MEPEQ9NQ76 525 aaPredicted RBP11.36□□□□□ -0.59
NPC1-202ENST00000540608 FBXO34Q9NWN3 711 aa11.36□□□□□ -0.59
NPC1-202ENST00000540608 GLTPQ9NZD2 209 aa11.36□□□□□ -0.59
NPC1-202ENST00000540608 MAT2BQ9NZL9 334 aa11.36□□□□□ -0.59
NPC1-202ENST00000540608 FBXL4Q9UKA2 621 aa11.36□□□□□ -0.59
NPC1-202ENST00000540608 A0A1W2PRG6 482 aa11.35□□□□□ -0.59
NPC1-202ENST00000540608 TRABD2BA6NFA1 517 aa11.35□□□□□ -0.59
NPC1-202ENST00000540608 NARSO43776 548 aaKnown RBP11.35□□□□□ -0.59
NPC1-202ENST00000540608 KAT7O95251 611 aa11.35□□□□□ -0.59
NPC1-202ENST00000540608 PPP1R3DO95685 299 aa11.35□□□□□ -0.59
NPC1-202ENST00000540608 FCARP24071 287 aa11.35□□□□□ -0.59
NPC1-202ENST00000540608 SGCGQ13326 291 aa11.35□□□□□ -0.59
NPC1-202ENST00000540608 SNTB2Q13425 540 aaKnown RBP11.35□□□□□ -0.59
NPC1-202ENST00000540608 KLF9Q13886 244 aaPredicted RBP11.35□□□□□ -0.59
NPC1-202ENST00000540608 SUZ12Q15022 739 aaKnown RBP11.35□□□□□ -0.59
NPC1-202ENST00000540608 LGALSLQ3ZCW2 172 aaPredicted RBP11.35□□□□□ -0.59
NPC1-202ENST00000540608 RNASE12Q5GAN4 147 aaKnown RBP11.35□□□□□ -0.59
NPC1-202ENST00000540608 ZNF613Q6PF04 617 aa11.35□□□□□ -0.59
NPC1-202ENST00000540608 ZNF687Q8N1G0 1237 aa11.35□□□□□ -0.59
NPC1-202ENST00000540608 OR4D9Q8NGE8 314 aa11.35□□□□□ -0.59
NPC1-202ENST00000540608 TM4SF19Q96DZ7 209 aa11.35□□□□□ -0.59
NPC1-202ENST00000540608 PEX11GQ96HA9 241 aa11.35□□□□□ -0.59
NPC1-202ENST00000540608 MAP6Q96JE9 813 aa11.35□□□□□ -0.59
NPC1-202ENST00000540608 GSDMCQ9BYG8 508 aa11.35□□□□□ -0.59
NPC1-202ENST00000540608 BRD7Q9NPI1 651 aa11.35□□□□□ -0.59
NPC1-202ENST00000540608 PRDM9Q9NQV7 894 aa11.35□□□□□ -0.59
NPC1-202ENST00000540608 DUSP22Q9NRW4 184 aa11.35□□□□□ -0.59
NPC1-202ENST00000540608 SCN3AQ9NY46 2000 aa11.35□□□□□ -0.59
NPC1-202ENST00000540608 A0A0B4J203 849 aa11.35□□□□□ -0.59
NPC1-202ENST00000540608 FLRT2O43155 660 aa11.35□□□□□ -0.59
NPC1-202ENST00000540608 DNAJB6O75190 326 aa11.35□□□□□ -0.59
NPC1-202ENST00000540608 ARL6IP5O75915 188 aa11.35□□□□□ -0.59
NPC1-202ENST00000540608 SLC35G6P0C7Q6 338 aa11.35□□□□□ -0.59
NPC1-202ENST00000540608 NT5EP21589 574 aa11.35□□□□□ -0.59
NPC1-202ENST00000540608 TOR2AQ5JU69 321 aa11.35□□□□□ -0.59
NPC1-202ENST00000540608 VITQ6UXI7 678 aa11.35□□□□□ -0.59
NPC1-202ENST00000540608 IDO2Q6ZQW0 420 aa11.35□□□□□ -0.59
NPC1-202ENST00000540608 RTL4Q6ZR62 310 aa11.35□□□□□ -0.59
NPC1-202ENST00000540608 FGD2Q7Z6J4 655 aa11.35□□□□□ -0.59
NPC1-202ENST00000540608 OR51Q1Q8NH59 317 aa11.35□□□□□ -0.59
NPC1-202ENST00000540608 OR56B4Q8NH76 319 aa11.35□□□□□ -0.59
NPC1-202ENST00000540608 RPLP0P6Q8NHW5 317 aa11.35□□□□□ -0.59
NPC1-202ENST00000540608 GIMAP1Q8WWP7 306 aa11.35□□□□□ -0.59
NPC1-202ENST00000540608 LCN9Q8WX39 176 aa11.35□□□□□ -0.59
NPC1-202ENST00000540608 MS4A3Q96HJ5 214 aa11.35□□□□□ -0.59
NPC1-202ENST00000540608 ZNF559Q9BR84 538 aa11.35□□□□□ -0.59
NPC1-202ENST00000540608 TMEM27Q9HBJ8 222 aa11.35□□□□□ -0.59
NPC1-202ENST00000540608 ADAP2Q9NPF8 381 aa11.35□□□□□ -0.59
NPC1-202ENST00000540608 DPP7Q9UHL4 492 aa11.35□□□□□ -0.59
NPC1-202ENST00000540608 SPATA2Q9UM82 520 aa11.35□□□□□ -0.59
NPC1-202ENST00000540608 DAPP1Q9UN19 280 aa11.35□□□□□ -0.59
NPC1-202ENST00000540608 NPIPA5A0A0B4J1W7 369 aa11.34□□□□□ -0.59
NPC1-202ENST00000540608 TEX51A0A1B0GUA7 166 aa11.34□□□□□ -0.59
NPC1-202ENST00000540608 A0A1W2PPK0 400 aa11.34□□□□□ -0.59
NPC1-202ENST00000540608 NPIPA7E9PJI5 369 aa11.34□□□□□ -0.59
NPC1-202ENST00000540608 MEN1O00255 615 aa11.34□□□□□ -0.59
NPC1-202ENST00000540608 GYPBP06028 91 aa11.34□□□□□ -0.59
NPC1-202ENST00000540608 SYPP08247 313 aa11.34□□□□□ -0.59
NPC1-202ENST00000540608 NPIPA8P0DM63 369 aa11.34□□□□□ -0.59
NPC1-202ENST00000540608 C5AR1P21730 350 aa11.34□□□□□ -0.59
NPC1-202ENST00000540608 SRP54P61011 504 aaKnown RBP11.34□□□□□ -0.59
NPC1-202ENST00000540608 DEFB134Q4QY38 66 aa11.34□□□□□ -0.59
NPC1-202ENST00000540608 OVCH1Q7RTY7 1134 aa11.34□□□□□ -0.59
NPC1-202ENST00000540608 CDH24Q86UP0 819 aa11.34□□□□□ -0.59
NPC1-202ENST00000540608 COX18Q8N8Q8 333 aa11.34□□□□□ -0.59
NPC1-202ENST00000540608 CDRT4Q8N9R6 151 aa11.34□□□□□ -0.59
NPC1-202ENST00000540608 PMM1Q92871 262 aa11.34□□□□□ -0.59
NPC1-202ENST00000540608 SMIM19Q96E16 107 aa11.34□□□□□ -0.59
NPC1-202ENST00000540608 RADILQ96JH8 1075 aa11.34□□□□□ -0.59
NPC1-202ENST00000540608 CMTM3Q96MX0 182 aa11.34□□□□□ -0.59
NPC1-202ENST00000540608 TNFRSF13CQ96RJ3 184 aa11.34□□□□□ -0.59
NPC1-202ENST00000540608 STACQ99469 402 aa11.34□□□□□ -0.59
NPC1-202ENST00000540608 DLL4Q9NR61 685 aa11.34□□□□□ -0.59
NPC1-202ENST00000540608 C14orf105Q9NVL8 296 aa11.34□□□□□ -0.59
NPC1-202ENST00000540608 SCP2D1Q9UJQ7 156 aa11.34□□□□□ -0.59
NPC1-202ENST00000540608 FBXL21Q9UKT6 434 aa11.34□□□□□ -0.59
NPC1-202ENST00000540608 SLC22A7Q9Y694 548 aa11.34□□□□□ -0.59
NPC1-202ENST00000540608 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.34□□□□□ -0.59
NPC1-202ENST00000540608 B3GALT2O43825 422 aa11.34□□□□□ -0.59
NPC1-202ENST00000540608 GATBO75879 557 aaKnown RBP11.34□□□□□ -0.59
NPC1-202ENST00000540608 ADH1BP00325 375 aa11.34□□□□□ -0.59
NPC1-202ENST00000540608 IFNGP01579 166 aa11.34□□□□□ -0.59
NPC1-202ENST00000540608 MT-ND4P03905 459 aa11.34□□□□□ -0.59
NPC1-202ENST00000540608 PDGFAP04085 211 aa11.34□□□□□ -0.59
NPC1-202ENST00000540608 UCHL1P09936 223 aa11.34□□□□□ -0.59
NPC1-202ENST00000540608 HOXD11P31277 338 aaPredicted RBP11.34□□□□□ -0.59
NPC1-202ENST00000540608 SOX9P48436 509 aa11.34□□□□□ -0.59
NPC1-202ENST00000540608 GDI2P50395 445 aaKnown RBP11.34□□□□□ -0.59
NPC1-202ENST00000540608 GBX2P52951 348 aaPredicted RBP11.34□□□□□ -0.59
NPC1-202ENST00000540608 RPS21P63220 83 aaKnown RBP11.34□□□□□ -0.59
NPC1-202ENST00000540608 HSF2Q03933 536 aa11.34□□□□□ -0.59
NPC1-202ENST00000540608 RUNX3Q13761 415 aa11.34□□□□□ -0.59
NPC1-202ENST00000540608 TP53I3Q53FA7 332 aa11.34□□□□□ -0.59
NPC1-202ENST00000540608 WDR45BQ5MNZ6 344 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms