RNA–Protein interactions for RNA: ENST00000540447.5

YBX3-208, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 6,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-208ENST00000540447 EID2Q8N6I1 236 aa8.23□□□□□ -1.09
YBX3-208ENST00000540447 OR52N2Q8NGI0 321 aa8.23□□□□□ -1.09
YBX3-208ENST00000540447 SUN3Q8TAQ9 357 aa8.23□□□□□ -1.09
YBX3-208ENST00000540447 LMX1AQ8TE12 382 aa8.23□□□□□ -1.09
YBX3-208ENST00000540447 AKT1S1Q96B36 256 aa8.23□□□□□ -1.09
YBX3-208ENST00000540447 LDAHQ9H6V9 325 aa8.23□□□□□ -1.09
YBX3-208ENST00000540447 EMCNQ9ULC0 261 aa8.23□□□□□ -1.09
YBX3-208ENST00000540447 NEXMIFQ5QGS0 1516 aa8.23□□□□□ -1.09
YBX3-208ENST00000540447 CCSO14618 274 aa8.23□□□□□ -1.09
YBX3-208ENST00000540447 CRYBA1P05813 215 aa8.23□□□□□ -1.09
YBX3-208ENST00000540447 MMP3P08254 477 aa8.23□□□□□ -1.09
YBX3-208ENST00000540447 RNH1P13489 461 aaKnown RBP8.23□□□□□ -1.09
YBX3-208ENST00000540447 AMD1P17707 334 aa8.23□□□□□ -1.09
YBX3-208ENST00000540447 OMGP23515 440 aa8.23□□□□□ -1.09
YBX3-208ENST00000540447 PCGF2P35227 344 aa8.23□□□□□ -1.09
YBX3-208ENST00000540447 PSEN2P49810 448 aa8.23□□□□□ -1.09
YBX3-208ENST00000540447 CCR8P51685 355 aa8.23□□□□□ -1.09
YBX3-208ENST00000540447 HNRNPKP61978 463 aaKnown RBP eCLIP8.23□□□□□ -1.09
YBX3-208ENST00000540447 ETFDHQ16134 617 aa8.23□□□□□ -1.09
YBX3-208ENST00000540447 HAGHQ16775 308 aa8.23□□□□□ -1.09
YBX3-208ENST00000540447 SOWAHCQ53LP3 525 aaPredicted RBP8.23□□□□□ -1.09
YBX3-208ENST00000540447 BVESQ8NE79 360 aa8.23□□□□□ -1.09
YBX3-208ENST00000540447 OR6T1Q8NGN1 323 aa8.23□□□□□ -1.09
YBX3-208ENST00000540447 OR14A16Q8NHC5 309 aa8.23□□□□□ -1.09
YBX3-208ENST00000540447 ZNF461Q8TAF7 563 aa8.23□□□□□ -1.09
YBX3-208ENST00000540447 TVP23CQ96ET8 276 aa8.23□□□□□ -1.09
YBX3-208ENST00000540447 SLC2A13Q96QE2 648 aa8.23□□□□□ -1.09
YBX3-208ENST00000540447 MS4A7Q9GZW8 240 aaPredicted RBP8.23□□□□□ -1.09
YBX3-208ENST00000540447 TRDV1A0A1B0GX56 115 aa8.23□□□□□ -1.09
YBX3-208ENST00000540447 ARNTLO00327 626 aa8.23□□□□□ -1.09
YBX3-208ENST00000540447 PSMB3P49720 205 aa8.23□□□□□ -1.09
YBX3-208ENST00000540447 FOXO1Q12778 655 aa8.23□□□□□ -1.09
YBX3-208ENST00000540447 RAB31Q13636 194 aa8.23□□□□□ -1.09
YBX3-208ENST00000540447 RGNQ15493 299 aa8.23□□□□□ -1.09
YBX3-208ENST00000540447 RPUSD3Q6P087 351 aaKnown RBP8.23□□□□□ -1.09
YBX3-208ENST00000540447 HMGN2P46Q86SG4 172 aa8.23□□□□□ -1.09
YBX3-208ENST00000540447 SERPINA11Q86U17 422 aa8.23□□□□□ -1.09
YBX3-208ENST00000540447 MCATQ8IVS2 390 aaKnown RBP8.23□□□□□ -1.09
YBX3-208ENST00000540447 TCTEX1D1Q8N7M0 179 aa8.23□□□□□ -1.09
YBX3-208ENST00000540447 PHYHIPLQ96FC7 376 aa8.23□□□□□ -1.09
YBX3-208ENST00000540447 RHOVQ96L33 236 aa8.23□□□□□ -1.09
YBX3-208ENST00000540447 PRAP1Q96NZ9 151 aa8.23□□□□□ -1.09
YBX3-208ENST00000540447 OR8D2Q9GZM6 311 aa8.23□□□□□ -1.09
YBX3-208ENST00000540447 INPP5EQ9NRR6 644 aa8.23□□□□□ -1.09
YBX3-208ENST00000540447 GON4LQ3T8J9 2241 aa8.23□□□□□ -1.09
YBX3-208ENST00000540447 OR5H14A6NHG9 310 aa8.23□□□□□ -1.09
YBX3-208ENST00000540447 CEBPZOSA8MTT3 80 aa8.23□□□□□ -1.09
YBX3-208ENST00000540447 BCL2L11O43521 198 aa8.23□□□□□ -1.09
YBX3-208ENST00000540447 AQP8O94778 261 aa8.23□□□□□ -1.09
YBX3-208ENST00000540447 F2P00734 622 aa8.23□□□□□ -1.09
YBX3-208ENST00000540447 ISL1P61371 349 aa8.23□□□□□ -1.09
YBX3-208ENST00000540447 MDGA2Q7Z553 956 aa8.23□□□□□ -1.09
YBX3-208ENST00000540447 PHYKPLQ8IUZ5 450 aa8.23□□□□□ -1.09
YBX3-208ENST00000540447 C1orf127Q8N9H9 656 aa8.23□□□□□ -1.09
YBX3-208ENST00000540447 ZIC5Q96T25 663 aa8.23□□□□□ -1.09
YBX3-208ENST00000540447 GPR88Q9GZN0 384 aa8.23□□□□□ -1.09
YBX3-208ENST00000540447 CERS4Q9HA82 394 aa8.23□□□□□ -1.09
YBX3-208ENST00000540447 UBQLN4Q9NRR5 601 aa8.23□□□□□ -1.09
YBX3-208ENST00000540447 NLE1Q9NVX2 485 aaPredicted RBP8.23□□□□□ -1.09
YBX3-208ENST00000540447 HECAQ9UBI9 543 aaPredicted RBP8.23□□□□□ -1.09
YBX3-208ENST00000540447 CA14Q9ULX7 337 aa8.23□□□□□ -1.09
YBX3-208ENST00000540447 DIMT1Q9UNQ2 313 aaKnown RBP8.23□□□□□ -1.09
YBX3-208ENST00000540447 H2AFB1P0C5Y9 115 aa8.22□□□□□ -1.09
YBX3-208ENST00000540447 MFGE8Q08431 387 aaPredicted RBP8.22□□□□□ -1.09
YBX3-208ENST00000540447 PMS2P11Q13670 270 aa8.22□□□□□ -1.09
YBX3-208ENST00000540447 TMEM135Q86UB9 458 aa8.22□□□□□ -1.09
YBX3-208ENST00000540447 OR4K13Q8NH42 304 aa8.22□□□□□ -1.09
YBX3-208ENST00000540447 TMEM169Q96HH4 297 aa8.22□□□□□ -1.09
YBX3-208ENST00000540447 PACRGQ96M98 296 aaPredicted RBP8.22□□□□□ -1.09
YBX3-208ENST00000540447 MAGEH1Q9H213 219 aa8.22□□□□□ -1.09
YBX3-208ENST00000540447 OR51I2Q9H344 312 aa8.22□□□□□ -1.09
YBX3-208ENST00000540447 SUV39H2Q9H5I1 410 aa8.22□□□□□ -1.09
YBX3-208ENST00000540447 ASAH2Q9NR71 780 aa8.22□□□□□ -1.09
YBX3-208ENST00000540447 LAMP3Q9UQV4 416 aa8.22□□□□□ -1.09
YBX3-208ENST00000540447 STRAPQ9Y3F4 350 aaKnown RBP8.22□□□□□ -1.09
YBX3-208ENST00000540447 KCTD3Q9Y597 815 aa8.22□□□□□ -1.09
YBX3-208ENST00000540447 EFCAB6Q5THR3 1501 aa8.22□□□□□ -1.09
YBX3-208ENST00000540447 MYO3AQ8NEV4 1616 aa8.22□□□□□ -1.09
YBX3-208ENST00000540447 LNP1A1A4G5 178 aa8.22□□□□□ -1.09
YBX3-208ENST00000540447 CTU2Q2VPK5 515 aaKnown RBP8.22□□□□□ -1.09
YBX3-208ENST00000540447 GPR33Q49SQ1 333 aa8.22□□□□□ -1.09
YBX3-208ENST00000540447 ZNF362Q5T0B9 420 aaPredicted RBP8.22□□□□□ -1.09
YBX3-208ENST00000540447 SDHAF4Q5VUM1 108 aa8.22□□□□□ -1.09
YBX3-208ENST00000540447 OR5M10Q6IEU7 315 aa8.22□□□□□ -1.09
YBX3-208ENST00000540447 TMEM220Q6QAJ8 160 aa8.22□□□□□ -1.09
YBX3-208ENST00000540447 TBPL2Q6SJ96 375 aa8.22□□□□□ -1.09
YBX3-208ENST00000540447 CBLN2Q8IUK8 224 aa8.22□□□□□ -1.09
YBX3-208ENST00000540447 NRMQ8IXM6 262 aa8.22□□□□□ -1.09
YBX3-208ENST00000540447 LRRC56Q8IYG6 542 aaPredicted RBP8.22□□□□□ -1.09
YBX3-208ENST00000540447 NAGSQ8N159 534 aa8.22□□□□□ -1.09
YBX3-208ENST00000540447 OR51T1Q8NGJ9 327 aa8.22□□□□□ -1.09
YBX3-208ENST00000540447 MS4A10Q96PG2 267 aa8.22□□□□□ -1.09
YBX3-208ENST00000540447 PEBP4Q96S96 227 aa8.22□□□□□ -1.09
YBX3-208ENST00000540447 SLC25A21Q9BQT8 299 aaPredicted RBP8.22□□□□□ -1.09
YBX3-208ENST00000540447 NICN1Q9BSH3 213 aa8.22□□□□□ -1.09
YBX3-208ENST00000540447 MCOLN1Q9GZU1 580 aa8.22□□□□□ -1.09
YBX3-208ENST00000540447 GSTO2Q9H4Y5 243 aa8.22□□□□□ -1.09
YBX3-208ENST00000540447 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.22□□□□□ -1.09
YBX3-208ENST00000540447 KCNG2Q9UJ96 466 aa8.22□□□□□ -1.09
YBX3-208ENST00000540447 JTBO76095 146 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms