RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 ZNF700Q9H0M5 742 aa15.48■□□□□ 0.07
COPS3-212ENST00000539941 RPS6KB2Q9UBS0 482 aa15.48■□□□□ 0.07
COPS3-212ENST00000539941 TMEM5Q9Y2B1 443 aa15.48■□□□□ 0.07
COPS3-212ENST00000539941 NPFFR2Q9Y5X5 522 aa15.48■□□□□ 0.07
COPS3-212ENST00000539941 ADAM11O75078 769 aa15.47■□□□□ 0.07
COPS3-212ENST00000539941 PPM1BO75688 479 aa15.47■□□□□ 0.07
COPS3-212ENST00000539941 POU1F1P28069 291 aa15.47■□□□□ 0.07
COPS3-212ENST00000539941 IDH2P48735 452 aaKnown RBP15.47■□□□□ 0.07
COPS3-212ENST00000539941 TUBA1BP68363 451 aa15.47■□□□□ 0.07
COPS3-212ENST00000539941 LSM11P83369 360 aaKnown RBP eCLIP15.47■□□□□ 0.07
COPS3-212ENST00000539941 CD226Q15762 336 aa15.47■□□□□ 0.07
COPS3-212ENST00000539941 EXT1Q16394 746 aa15.47■□□□□ 0.07
COPS3-212ENST00000539941 HES3Q5TGS1 186 aa15.47■□□□□ 0.07
COPS3-212ENST00000539941 BROXQ5VW32 411 aa15.47■□□□□ 0.07
COPS3-212ENST00000539941 DHRS13Q6UX07 377 aa15.47■□□□□ 0.07
COPS3-212ENST00000539941 PLEKHG7Q6ZR37 379 aa15.47■□□□□ 0.07
COPS3-212ENST00000539941 TUBA1AQ71U36 451 aa15.47■□□□□ 0.07
COPS3-212ENST00000539941 CLDN22Q8N7P3 220 aa15.47■□□□□ 0.07
COPS3-212ENST00000539941 FAM46AQ96IP4 442 aaKnown RBP15.47■□□□□ 0.07
COPS3-212ENST00000539941 GPA33Q99795 319 aa15.47■□□□□ 0.07
COPS3-212ENST00000539941 MESP1Q9BRJ9 268 aa15.47■□□□□ 0.07
COPS3-212ENST00000539941 ZNF426Q9BUY5 554 aa15.47■□□□□ 0.07
COPS3-212ENST00000539941 B3GNT4Q9C0J1 378 aa15.47■□□□□ 0.07
COPS3-212ENST00000539941 LAT2Q9GZY6 243 aa15.47■□□□□ 0.07
COPS3-212ENST00000539941 SCN3BQ9NY72 215 aa15.47■□□□□ 0.07
COPS3-212ENST00000539941 TPRKBQ9Y3C4 175 aa15.47■□□□□ 0.07
COPS3-212ENST00000539941 IGHV1-45A0A0A0MS14 117 aa15.46■□□□□ 0.07
COPS3-212ENST00000539941 TEX51A0A1B0GUA7 166 aa15.46■□□□□ 0.07
COPS3-212ENST00000539941 GTPBP1O00178 669 aaKnown RBP15.46■□□□□ 0.07
COPS3-212ENST00000539941 EIF4E2O60573 245 aaKnown RBP15.46■□□□□ 0.07
COPS3-212ENST00000539941 WBP4O75554 376 aaKnown RBP15.46■□□□□ 0.07
COPS3-212ENST00000539941 SOX14O95416 240 aa15.46■□□□□ 0.07
COPS3-212ENST00000539941 ZNF182P17025 639 aaPredicted RBP15.46■□□□□ 0.07
COPS3-212ENST00000539941 EEF1B2P24534 225 aaKnown RBP15.46■□□□□ 0.07
COPS3-212ENST00000539941 SLC6A8P48029 635 aa15.46■□□□□ 0.07
COPS3-212ENST00000539941 CTBP2P56545 445 aa15.46■□□□□ 0.07
COPS3-212ENST00000539941 PRKCDQ05655 676 aa15.46■□□□□ 0.07
COPS3-212ENST00000539941 SELENBP1Q13228 472 aa15.46■□□□□ 0.07
COPS3-212ENST00000539941 KRR1Q13601 381 aaKnown RBP15.46■□□□□ 0.07
COPS3-212ENST00000539941 ALG10BQ5I7T1 473 aa15.46■□□□□ 0.07
COPS3-212ENST00000539941 C12orf73Q69YU5 71 aa15.46■□□□□ 0.07
COPS3-212ENST00000539941 APOOLQ6UXV4 268 aa15.46■□□□□ 0.07
COPS3-212ENST00000539941 WDR88Q6ZMY6 472 aa15.46■□□□□ 0.07
COPS3-212ENST00000539941 VASH1Q7L8A9 365 aaPredicted RBP15.46■□□□□ 0.07
COPS3-212ENST00000539941 P3H2Q8IVL5 708 aa15.46■□□□□ 0.07
COPS3-212ENST00000539941 POGLUT1Q8NBL1 392 aa15.46■□□□□ 0.07
COPS3-212ENST00000539941 ANGPTL6Q8NI99 470 aa15.46■□□□□ 0.07
COPS3-212ENST00000539941 ELP5Q8TE02 316 aa15.46■□□□□ 0.07
COPS3-212ENST00000539941 GRHL3Q8TE85 626 aa15.46■□□□□ 0.07
COPS3-212ENST00000539941 ZNF486Q96H40 463 aaPredicted RBP15.46■□□□□ 0.07
COPS3-212ENST00000539941 TBL1XR1Q9BZK7 514 aa15.46■□□□□ 0.07
COPS3-212ENST00000539941 FAM117AQ9C073 453 aa15.46■□□□□ 0.07
COPS3-212ENST00000539941 OR2B2Q9GZK3 357 aa15.46■□□□□ 0.07
COPS3-212ENST00000539941 SLC25A19Q9HC21 320 aa15.46■□□□□ 0.07
COPS3-212ENST00000539941 AKIP1Q9NQ31 210 aa15.46■□□□□ 0.07
COPS3-212ENST00000539941 RYDENQ9NUL5 291 aaKnown RBP15.46■□□□□ 0.07
COPS3-212ENST00000539941 MED31Q9Y3C7 131 aa15.46■□□□□ 0.07
COPS3-212ENST00000539941 MRPS14O60783 128 aaKnown RBP15.45■□□□□ 0.06
COPS3-212ENST00000539941 DKK1O94907 266 aa15.45■□□□□ 0.06
COPS3-212ENST00000539941 GABRB1P18505 474 aa15.45■□□□□ 0.06
COPS3-212ENST00000539941 WBP2NLQ6ICG8 309 aa15.45■□□□□ 0.06
COPS3-212ENST00000539941 KIRREL2Q6UWL6 708 aa15.45■□□□□ 0.06
COPS3-212ENST00000539941 CASP12Q6UXS9 341 aa15.45■□□□□ 0.06
COPS3-212ENST00000539941 LINC00114Q6XXX2 140 aa15.45■□□□□ 0.06
COPS3-212ENST00000539941 MISPQ8IVT2 679 aa15.45■□□□□ 0.06
COPS3-212ENST00000539941 CDK20Q8IZL9 346 aa15.45■□□□□ 0.06
COPS3-212ENST00000539941 NLGN4XQ8N0W4 816 aa15.45■□□□□ 0.06
COPS3-212ENST00000539941 CACTIN-AS1Q8N1I8 211 aa15.45■□□□□ 0.06
COPS3-212ENST00000539941 BPIFB6Q8NFQ5 453 aa15.45■□□□□ 0.06
COPS3-212ENST00000539941 TEX47Q8TBZ9 253 aa15.45■□□□□ 0.06
COPS3-212ENST00000539941 APH1BQ8WW43 257 aa15.45■□□□□ 0.06
COPS3-212ENST00000539941 IMMP1LQ96LU5 166 aa15.45■□□□□ 0.06
COPS3-212ENST00000539941 CCNB1IP1Q9NPC3 277 aa15.45■□□□□ 0.06
COPS3-212ENST00000539941 RASSF1Q9NS23 344 aa15.45■□□□□ 0.06
COPS3-212ENST00000539941 PLCXD1Q9NUJ7 323 aa15.45■□□□□ 0.06
COPS3-212ENST00000539941 ZNF226Q9NYT6 803 aa15.45■□□□□ 0.06
COPS3-212ENST00000539941 CNIH4Q9P003 139 aa15.45■□□□□ 0.06
COPS3-212ENST00000539941 HS3ST3B1Q9Y662 390 aa15.45■□□□□ 0.06
COPS3-212ENST00000539941 PCNX2A6NKB5 2137 aa15.45■□□□□ 0.06
COPS3-212ENST00000539941 TMEM200CA6NKL6 621 aa15.44■□□□□ 0.06
COPS3-212ENST00000539941 C9orf172C9J069 976 aa15.44■□□□□ 0.06
COPS3-212ENST00000539941 PIP5K1CO60331 668 aa15.44■□□□□ 0.06
COPS3-212ENST00000539941 FADS1O60427 444 aa15.44■□□□□ 0.06
COPS3-212ENST00000539941 NADKO95544 446 aaPredicted RBP15.44■□□□□ 0.06
COPS3-212ENST00000539941 COX6A1P12074 109 aa15.44■□□□□ 0.06
COPS3-212ENST00000539941 TCEA1P23193 301 aaKnown RBP15.44■□□□□ 0.06
COPS3-212ENST00000539941 FMO3P31513 532 aa15.44■□□□□ 0.06
COPS3-212ENST00000539941 EVI2BP34910 448 aa15.44■□□□□ 0.06
COPS3-212ENST00000539941 SMSP52788 366 aa15.44■□□□□ 0.06
COPS3-212ENST00000539941 CLDN6P56747 220 aa15.44■□□□□ 0.06
COPS3-212ENST00000539941 SNRPGP62308 76 aaKnown RBP15.44■□□□□ 0.06
COPS3-212ENST00000539941 CDK5Q00535 292 aa15.44■□□□□ 0.06
COPS3-212ENST00000539941 SF3B4Q15427 424 aaKnown RBP eCLIP15.44■□□□□ 0.062e-6■■■□□ 16.9
COPS3-212ENST00000539941 NDUFAF6Q330K2 333 aa15.44■□□□□ 0.06
COPS3-212ENST00000539941 TMEM236Q5W0B7 351 aa15.44■□□□□ 0.06
COPS3-212ENST00000539941 TMPRSS11FQ6ZWK6 438 aa15.44■□□□□ 0.06
COPS3-212ENST00000539941 CADM2Q8N3J6 435 aa15.44■□□□□ 0.06
COPS3-212ENST00000539941 ESX1Q8N693 406 aa15.44■□□□□ 0.06
COPS3-212ENST00000539941 GATSQ8NAP1 163 aa15.44■□□□□ 0.06
COPS3-212ENST00000539941 M1APQ8TC57 530 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms