RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 DEF8Q6ZN54 512 aa13.99□□□□□ -0.17
DDB1-216ENST00000539739 YRDCQ86U90 279 aaKnown RBP13.99□□□□□ -0.17
DDB1-216ENST00000539739 LACC1Q8IV20 430 aa13.99□□□□□ -0.17
DDB1-216ENST00000539739 CADM2Q8N3J6 435 aa13.99□□□□□ -0.17
DDB1-216ENST00000539739 FAM86B1Q8N7N1 296 aa13.99□□□□□ -0.17
DDB1-216ENST00000539739 GIMAP1Q8WWP7 306 aa13.99□□□□□ -0.17
DDB1-216ENST00000539739 SEPHS2Q99611 448 aa13.99□□□□□ -0.17
DDB1-216ENST00000539739 WFDC6Q9BQY6 131 aa13.99□□□□□ -0.17
DDB1-216ENST00000539739 PIGQQ9BRB3 760 aa13.99□□□□□ -0.17
DDB1-216ENST00000539739 OR2B2Q9GZK3 357 aa13.99□□□□□ -0.17
DDB1-216ENST00000539739 DEFB127Q9H1M4 99 aa13.99□□□□□ -0.17
DDB1-216ENST00000539739 LDAHQ9H6V9 325 aa13.99□□□□□ -0.17
DDB1-216ENST00000539739 MAGIXQ9H6Y5 334 aa13.99□□□□□ -0.17
DDB1-216ENST00000539739 ACKR4Q9NPB9 350 aa13.99□□□□□ -0.17
DDB1-216ENST00000539739 AGPAT4Q9NRZ5 378 aa13.99□□□□□ -0.17
DDB1-216ENST00000539739 ACER3Q9NUN7 267 aa13.99□□□□□ -0.17
DDB1-216ENST00000539739 SELENONQ9NZV5 590 aa13.99□□□□□ -0.17
DDB1-216ENST00000539739 RPH3AQ9Y2J0 694 aaPredicted RBP13.99□□□□□ -0.17
DDB1-216ENST00000539739 BOD1L1Q8NFC6 3051 aa13.99□□□□□ -0.17
DDB1-216ENST00000539739 DHRS12A0PJE2 317 aa13.98□□□□□ -0.17
DDB1-216ENST00000539739 NPIPA5E9PKD4 350 aa13.98□□□□□ -0.17
DDB1-216ENST00000539739 GPIP06744 558 aa13.98□□□□□ -0.17
DDB1-216ENST00000539739 ITGA2P17301 1181 aa13.98□□□□□ -0.17
DDB1-216ENST00000539739 ADH6P28332 368 aa13.98□□□□□ -0.17
DDB1-216ENST00000539739 SLC1A3P43003 542 aa13.98□□□□□ -0.17
DDB1-216ENST00000539739 HTR3AP46098 478 aa13.98□□□□□ -0.17
DDB1-216ENST00000539739 RAET1LQ5VY80 246 aa13.98□□□□□ -0.17
DDB1-216ENST00000539739 CYP4Z1Q86W10 505 aa13.98□□□□□ -0.17
DDB1-216ENST00000539739 RBM45Q8IUH3 476 aaKnown RBP13.98□□□□□ -0.17
DDB1-216ENST00000539739 LSMEM1Q8N8F7 131 aa13.98□□□□□ -0.17
DDB1-216ENST00000539739 OR4D11Q8NGI4 311 aa13.98□□□□□ -0.17
DDB1-216ENST00000539739 FAR1Q8WVX9 515 aa13.98□□□□□ -0.17
DDB1-216ENST00000539739 SNRNP40Q96DI7 357 aaKnown RBP13.98□□□□□ -0.17
DDB1-216ENST00000539739 MRGPRX4Q96LA9 322 aa13.98□□□□□ -0.17
DDB1-216ENST00000539739 KLHDC3Q9BQ90 382 aa13.98□□□□□ -0.17
DDB1-216ENST00000539739 AMBRA1Q9C0C7 1298 aa13.98□□□□□ -0.17
DDB1-216ENST00000539739 POLR2J2Q9GZM3 115 aaKnown RBP13.98□□□□□ -0.17
DDB1-216ENST00000539739 POLR2J3Q9H1A7 115 aaKnown RBP13.98□□□□□ -0.17
DDB1-216ENST00000539739 EXO5Q9H790 373 aa13.98□□□□□ -0.17
DDB1-216ENST00000539739 RABL2AQ9UBK7 228 aaPredicted RBP13.98□□□□□ -0.17
DDB1-216ENST00000539739 NKX1-2Q9UD57 310 aaPredicted RBP13.98□□□□□ -0.17
DDB1-216ENST00000539739 NPIPA1Q9UND3 350 aa13.98□□□□□ -0.17
DDB1-216ENST00000539739 PRELID1Q9Y255 219 aa13.98□□□□□ -0.17
DDB1-216ENST00000539739 HEATR5AQ86XA9 2040 aa13.98□□□□□ -0.17
DDB1-216ENST00000539739 TCRBV3S1A0A5B6 114 aa13.97□□□□□ -0.17
DDB1-216ENST00000539739 FABP3P05413 133 aa13.97□□□□□ -0.17
DDB1-216ENST00000539739 PRKCAP17252 672 aa13.97□□□□□ -0.17
DDB1-216ENST00000539739 TCEA1P23193 301 aaKnown RBP13.97□□□□□ -0.17
DDB1-216ENST00000539739 OR1Q1Q15612 314 aa13.97□□□□□ -0.17
DDB1-216ENST00000539739 NPTX1Q15818 432 aa13.97□□□□□ -0.17
DDB1-216ENST00000539739 WIPI1Q5MNZ9 446 aaPredicted RBP13.97□□□□□ -0.17
DDB1-216ENST00000539739 ENTPD8Q5MY95 495 aa13.97□□□□□ -0.17
DDB1-216ENST00000539739 PLEKHM3Q6ZWE6 761 aa13.97□□□□□ -0.17
DDB1-216ENST00000539739 GRINAQ7Z429 371 aa13.97□□□□□ -0.17
DDB1-216ENST00000539739 GTPBP8Q8N3Z3 284 aaPredicted RBP13.97□□□□□ -0.17
DDB1-216ENST00000539739 DNAJA4Q8WW22 397 aaPredicted RBP13.97□□□□□ -0.17
DDB1-216ENST00000539739 NR4A3Q92570 626 aa13.97□□□□□ -0.17
DDB1-216ENST00000539739 ABTB1Q969K4 478 aaPredicted RBP13.97□□□□□ -0.17
DDB1-216ENST00000539739 SFXN2Q96NB2 322 aa13.97□□□□□ -0.17
DDB1-216ENST00000539739 ZNF184Q99676 751 aaPredicted RBP13.97□□□□□ -0.17
DDB1-216ENST00000539739 TSPAN10Q9H1Z9 355 aaPredicted RBP13.97□□□□□ -0.17
DDB1-216ENST00000539739 AURKCQ9UQB9 309 aa13.97□□□□□ -0.17
DDB1-216ENST00000539739 TRGV5A0A0B4J1U4 118 aa13.97□□□□□ -0.17
DDB1-216ENST00000539739 C7orf72A4D263 438 aa13.97□□□□□ -0.17
DDB1-216ENST00000539739 CPSF4LA6NMK7 179 aaKnown RBP13.97□□□□□ -0.17
DDB1-216ENST00000539739 LINC01387J3KSC0 135 aa13.97□□□□□ -0.17
DDB1-216ENST00000539739 ETV2O00321 342 aaPredicted RBP13.97□□□□□ -0.17
DDB1-216ENST00000539739 TPST2O60704 377 aa13.97□□□□□ -0.17
DDB1-216ENST00000539739 HCN1O60741 890 aa13.97□□□□□ -0.17
DDB1-216ENST00000539739 SEMG1P04279 462 aa13.97□□□□□ -0.17
DDB1-216ENST00000539739 CELA3AP09093 270 aa13.97□□□□□ -0.17
DDB1-216ENST00000539739 RAP2AP10114 183 aa13.97□□□□□ -0.17
DDB1-216ENST00000539739 ZNF17P17021 662 aa13.97□□□□□ -0.17
DDB1-216ENST00000539739 HTR2AP28223 471 aa13.97□□□□□ -0.17
DDB1-216ENST00000539739 APOBEC1P41238 236 aaKnown RBP13.97□□□□□ -0.17
DDB1-216ENST00000539739 ERFP50548 548 aa13.97□□□□□ -0.17
DDB1-216ENST00000539739 TAS2R41P59536 307 aa13.97□□□□□ -0.17
DDB1-216ENST00000539739 ACTR3P61158 418 aa13.97□□□□□ -0.17
DDB1-216ENST00000539739 SLC34A1Q06495 639 aa13.97□□□□□ -0.17
DDB1-216ENST00000539739 MERTKQ12866 999 aa13.97□□□□□ -0.17
DDB1-216ENST00000539739 FOXF1Q12946 379 aa13.97□□□□□ -0.17
DDB1-216ENST00000539739 KRTCAP3Q53RY4 240 aa13.97□□□□□ -0.17
DDB1-216ENST00000539739 SLC25A53Q5H9E4 307 aa13.97□□□□□ -0.17
DDB1-216ENST00000539739 AAGABQ6PD74 315 aa13.97□□□□□ -0.17
DDB1-216ENST00000539739 ZNF613Q6PF04 617 aa13.97□□□□□ -0.17
DDB1-216ENST00000539739 ZDHHC21Q8IVQ6 265 aa13.97□□□□□ -0.17
DDB1-216ENST00000539739 SIAH3Q8IW03 269 aa13.97□□□□□ -0.17
DDB1-216ENST00000539739 ADGRG5Q8IZF4 528 aa13.97□□□□□ -0.17
DDB1-216ENST00000539739 ADAMTS16Q8TE57 1224 aa13.97□□□□□ -0.17
DDB1-216ENST00000539739 CANT1Q8WVQ1 401 aa13.97□□□□□ -0.17
DDB1-216ENST00000539739 C7orf34Q96L11 122 aa13.97□□□□□ -0.17
DDB1-216ENST00000539739 PRR14Q9BWN1 585 aa13.97□□□□□ -0.17
DDB1-216ENST00000539739 IL1RAPQ9NPH3 570 aa13.97□□□□□ -0.17
DDB1-216ENST00000539739 SERINC1Q9NRX5 453 aa13.97□□□□□ -0.17
DDB1-216ENST00000539739 ENPP4Q9Y6X5 453 aa13.97□□□□□ -0.17
DDB1-216ENST00000539739 BSNQ9UPA5 3926 aa13.96□□□□□ -0.17
DDB1-216ENST00000539739 PCNX3Q9H6A9 2034 aa13.96□□□□□ -0.17
DDB1-216ENST00000539739 A0A1B0GWA3 101 aa13.96□□□□□ -0.17
DDB1-216ENST00000539739 TRAPPC13A5PLN9 417 aa13.96□□□□□ -0.17
DDB1-216ENST00000539739 hCG_2039718K7EN88 272 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms