RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 DPM1O60762 260 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 LCKP06239 509 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 GDF1P27539 372 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 MPEG1Q2M385 716 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 VRK2Q86Y07 508 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 ABHD11Q8NFV4 315 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 MYLIPQ8WY64 445 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 SLC41A2Q96JW4 573 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 PPIL3Q9H2H8 161 aaKnown RBP6.07□□□□□ -1.44
LSAMP-207ENST00000539563 CUTCQ9NTM9 273 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 PAQR5Q9NXK6 330 aaPredicted RBP6.07□□□□□ -1.44
LSAMP-207ENST00000539563 KCMF1Q9P0J7 381 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 TP53TG5Q9Y2B4 290 aa6.07□□□□□ -1.44
LSAMP-207ENST00000539563 SIPA1L3O60292 1781 aaPredicted RBP6.06□□□□□ -1.44
LSAMP-207ENST00000539563 METTL15A6NJ78 407 aa6.06□□□□□ -1.44
LSAMP-207ENST00000539563 ZBTB42B2RXF5 422 aa6.06□□□□□ -1.44
LSAMP-207ENST00000539563 HPGDSO60760 199 aa6.06□□□□□ -1.44
LSAMP-207ENST00000539563 SLC43A1O75387 559 aa6.06□□□□□ -1.44
LSAMP-207ENST00000539563 IL1AP01583 271 aa6.06□□□□□ -1.44
LSAMP-207ENST00000539563 HLA-FP30511 346 aa6.06□□□□□ -1.44
LSAMP-207ENST00000539563 TAS2R46P59540 309 aa6.06□□□□□ -1.44
LSAMP-207ENST00000539563 TAS2R19P59542 299 aa6.06□□□□□ -1.44
LSAMP-207ENST00000539563 MRPL2Q5T653 305 aaKnown RBP6.06□□□□□ -1.44
LSAMP-207ENST00000539563 CYB561A3Q8NBI2 242 aa6.06□□□□□ -1.44
LSAMP-207ENST00000539563 OR1J4Q8NGS1 313 aa6.06□□□□□ -1.44
LSAMP-207ENST00000539563 OR1S1Q8NH92 325 aa6.06□□□□□ -1.44
LSAMP-207ENST00000539563 UPRTQ96BW1 309 aa6.06□□□□□ -1.44
LSAMP-207ENST00000539563 OR52D1Q9H346 318 aa6.06□□□□□ -1.44
LSAMP-207ENST00000539563 TMEM100Q9NV29 134 aa6.06□□□□□ -1.44
LSAMP-207ENST00000539563 LRFN1Q9P244 771 aa6.06□□□□□ -1.44
LSAMP-207ENST00000539563 CAMK2AQ9UQM7 478 aa6.06□□□□□ -1.44
LSAMP-207ENST00000539563 TMEM212A6NML5 194 aa6.06□□□□□ -1.44
LSAMP-207ENST00000539563 UBFD1O14562 309 aaKnown RBP6.06□□□□□ -1.44
LSAMP-207ENST00000539563 OR7A17O14581 309 aa6.06□□□□□ -1.44
LSAMP-207ENST00000539563 TPT1P13693 172 aaKnown RBP6.06□□□□□ -1.44
LSAMP-207ENST00000539563 ZNF322Q6U7Q0 402 aaPredicted RBP6.06□□□□□ -1.44
LSAMP-207ENST00000539563 OR6F1Q8NGZ6 308 aa6.06□□□□□ -1.44
LSAMP-207ENST00000539563 DEDD2Q8WXF8 326 aa6.06□□□□□ -1.44
LSAMP-207ENST00000539563 RHBDD3Q9Y3P4 386 aa6.06□□□□□ -1.44
LSAMP-207ENST00000539563 DCDC2BA2VCK2 349 aa6.06□□□□□ -1.44
LSAMP-207ENST00000539563 SULT1C2O00338 296 aa6.06□□□□□ -1.44
LSAMP-207ENST00000539563 GAPDHSO14556 408 aaPredicted RBP6.06□□□□□ -1.44
LSAMP-207ENST00000539563 MPPED1O15442 326 aa6.06□□□□□ -1.44
LSAMP-207ENST00000539563 SUSD5O60279 629 aa6.06□□□□□ -1.44
LSAMP-207ENST00000539563 SERPINE2P07093 398 aa6.06□□□□□ -1.44
LSAMP-207ENST00000539563 PRDX3P30048 256 aaKnown RBP6.06□□□□□ -1.44
LSAMP-207ENST00000539563 RRADP55042 308 aa6.06□□□□□ -1.44
LSAMP-207ENST00000539563 DCDP81605 110 aaKnown RBP6.06□□□□□ -1.44
LSAMP-207ENST00000539563 KCTD11Q693B1 232 aa6.06□□□□□ -1.44
LSAMP-207ENST00000539563 FRMPD2BQ6IN97 320 aa6.06□□□□□ -1.44
LSAMP-207ENST00000539563 GAREM2Q75VX8 874 aa6.06□□□□□ -1.44
LSAMP-207ENST00000539563 TMEM130Q8N3G9 435 aa6.06□□□□□ -1.44
LSAMP-207ENST00000539563 KLHDC9Q8NEP7 349 aa6.06□□□□□ -1.44
LSAMP-207ENST00000539563 OR1J2Q8NGS2 313 aa6.06□□□□□ -1.44
LSAMP-207ENST00000539563 OR4K15Q8NH41 348 aa6.06□□□□□ -1.44
LSAMP-207ENST00000539563 ZFPM2Q8WW38 1151 aa6.06□□□□□ -1.44
LSAMP-207ENST00000539563 KCTD12Q96CX2 325 aaKnown RBP6.06□□□□□ -1.44
LSAMP-207ENST00000539563 SORBS1Q9BX66 1292 aaKnown RBP6.06□□□□□ -1.44
LSAMP-207ENST00000539563 SDHAF2Q9NX18 166 aa6.06□□□□□ -1.44
LSAMP-207ENST00000539563 BABAM2Q9NXR7 383 aa6.06□□□□□ -1.44
LSAMP-207ENST00000539563 MYEF2Q9P2K5 600 aaKnown RBP6.06□□□□□ -1.44
LSAMP-207ENST00000539563 DNMT3BQ9UBC3 853 aaKnown RBP6.06□□□□□ -1.44
LSAMP-207ENST00000539563 LAMB2P55268 1798 aa6.06□□□□□ -1.44
LSAMP-207ENST00000539563 PEX14O75381 377 aa6.06□□□□□ -1.44
LSAMP-207ENST00000539563 DCNP07585 359 aaKnown RBP6.06□□□□□ -1.44
LSAMP-207ENST00000539563 HTR2BP41595 481 aa6.06□□□□□ -1.44
LSAMP-207ENST00000539563 GTDC1Q4AE62 458 aa6.06□□□□□ -1.44
LSAMP-207ENST00000539563 AGAP7PQ5VUJ5 663 aa6.06□□□□□ -1.44
LSAMP-207ENST00000539563 AADACL4Q5VUY2 407 aa6.06□□□□□ -1.44
LSAMP-207ENST00000539563 AGAP6Q5VW22 663 aa6.06□□□□□ -1.44
LSAMP-207ENST00000539563 OR51L1Q8NGJ5 315 aa6.06□□□□□ -1.44
LSAMP-207ENST00000539563 FER1L6-AS2Q96M78 137 aa6.06□□□□□ -1.44
LSAMP-207ENST00000539563 AGAP4Q96P64 663 aa6.06□□□□□ -1.44
LSAMP-207ENST00000539563 HCFC2Q9Y5Z7 792 aa6.06□□□□□ -1.44
LSAMP-207ENST00000539563 OTOL1A6NHN0 477 aaPredicted RBP6.06□□□□□ -1.44
LSAMP-207ENST00000539563 TRAPPC2LH3BP13 241 aa6.06□□□□□ -1.44
LSAMP-207ENST00000539563 KNG1P01042 644 aa6.06□□□□□ -1.44
LSAMP-207ENST00000539563 OPRD1P41143 372 aa6.06□□□□□ -1.44
LSAMP-207ENST00000539563 ATP1B3P54709 279 aa6.06□□□□□ -1.44
LSAMP-207ENST00000539563 MTFR2Q6P444 385 aa6.06□□□□□ -1.44
LSAMP-207ENST00000539563 SULF2Q8IWU5 870 aa6.06□□□□□ -1.44
LSAMP-207ENST00000539563 SENP5Q96HI0 755 aaPredicted RBP6.06□□□□□ -1.44
LSAMP-207ENST00000539563 A4GALTQ9NPC4 353 aa6.06□□□□□ -1.44
LSAMP-207ENST00000539563 RNF212BA8MTL3 300 aa6.06□□□□□ -1.44
LSAMP-207ENST00000539563 A8MXE2 369 aa6.06□□□□□ -1.44
LSAMP-207ENST00000539563 TOR1AO14656 332 aa6.06□□□□□ -1.44
LSAMP-207ENST00000539563 AQP9O43315 295 aa6.06□□□□□ -1.44
LSAMP-207ENST00000539563 ITGB2P05107 769 aa6.06□□□□□ -1.44
LSAMP-207ENST00000539563 OR2T7P0C7T2 308 aa6.06□□□□□ -1.44
LSAMP-207ENST00000539563 BMP4P12644 408 aa6.06□□□□□ -1.44
LSAMP-207ENST00000539563 RPS5P46782 204 aaKnown RBP6.06□□□□□ -1.44
LSAMP-207ENST00000539563 FAM78AQ5JUQ0 283 aa6.06□□□□□ -1.44
LSAMP-207ENST00000539563 CLVS2Q5SYC1 327 aa6.06□□□□□ -1.44
LSAMP-207ENST00000539563 OR4M1Q8NGD0 313 aa6.06□□□□□ -1.44
LSAMP-207ENST00000539563 OR2T27Q8NH04 317 aa6.06□□□□□ -1.44
LSAMP-207ENST00000539563 USP54Q70EL1 1684 aa6.06□□□□□ -1.44
LSAMP-207ENST00000539563 A0A087WUU8 490 aa6.05□□□□□ -1.44
LSAMP-207ENST00000539563 FAM230AA0A1W2PPH8 454 aa6.05□□□□□ -1.44
LSAMP-207ENST00000539563 GPRIN2O60269 458 aa6.05□□□□□ -1.44
LSAMP-207ENST00000539563 SORBS2O94875 1100 aaKnown RBP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms