RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 TCRBV16S1A1N1A0A5B0 115 aa11.63□□□□□ -0.55
SFSWAP-208ENST00000539506 EPOPA6NHQ4 379 aa11.63□□□□□ -0.55
SFSWAP-208ENST00000539506 SERPINI2O75830 405 aa11.63□□□□□ -0.55
SFSWAP-208ENST00000539506 PAICSP22234 425 aaKnown RBP11.63□□□□□ -0.55
SFSWAP-208ENST00000539506 PRKAR1BP31321 381 aa11.63□□□□□ -0.55
SFSWAP-208ENST00000539506 FGF9P31371 208 aaPredicted RBP11.63□□□□□ -0.55
SFSWAP-208ENST00000539506 GCGRP47871 477 aa11.63□□□□□ -0.55
SFSWAP-208ENST00000539506 UBE2MP61081 183 aaKnown RBP11.63□□□□□ -0.55
SFSWAP-208ENST00000539506 TMEM31Q5JXX7 168 aa11.63□□□□□ -0.55
SFSWAP-208ENST00000539506 CD200R1LQ6Q8B3 271 aa11.63□□□□□ -0.55
SFSWAP-208ENST00000539506 KIAA1324Q6UXG2 1013 aaKnown RBP11.63□□□□□ -0.55
SFSWAP-208ENST00000539506 LIX1LQ8IVB5 337 aa11.63□□□□□ -0.55
SFSWAP-208ENST00000539506 SFTPA2Q8IWL1 248 aa11.63□□□□□ -0.55
SFSWAP-208ENST00000539506 C7orf61Q8IZ16 206 aa11.63□□□□□ -0.55
SFSWAP-208ENST00000539506 SEC22CQ9BRL7 303 aa11.63□□□□□ -0.55
SFSWAP-208ENST00000539506 GHITMQ9H3K2 345 aa11.63□□□□□ -0.55
SFSWAP-208ENST00000539506 BRD7Q9NPI1 651 aa11.63□□□□□ -0.55
SFSWAP-208ENST00000539506 CBLCQ9ULV8 474 aa11.63□□□□□ -0.55
SFSWAP-208ENST00000539506 ZNF443Q9Y2A4 671 aaPredicted RBP11.63□□□□□ -0.55
SFSWAP-208ENST00000539506 EXOSC1Q9Y3B2 195 aaKnown RBP11.63□□□□□ -0.55
SFSWAP-208ENST00000539506 DAPL1A0PJW8 107 aa11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 ZNF860A6NHJ4 632 aa11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 ALDOBP05062 364 aa11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 POLR2CP19387 275 aaPredicted RBP11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 EN2P19622 333 aaPredicted RBP11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 FPR3P25089 353 aa11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 NOS3P29474 1203 aa11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 ANXA11P50995 505 aaKnown RBP11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 RGS8P57771 180 aaPredicted RBP11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 MELKQ14680 651 aa11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 TMEM255AQ5JRV8 349 aa11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 ZNF620Q6ZNG0 422 aa11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 Q6ZTK2 550 aa11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 UBE2Q1Q7Z7E8 422 aa11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 OR51A7Q8NH64 312 aa11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 COQ8AQ8NI60 647 aa11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 ADAMTS15Q8TE58 950 aa11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 ACOT11Q8WXI4 607 aaPredicted RBP11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 KIAA1143Q96AT1 154 aaPredicted RBP11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 ZC3HAV1LQ96H79 300 aaKnown RBP11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 GPR137Q96N19 417 aa11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 LINC00052Q96N35 136 aa11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 OR2A5Q96R48 311 aa11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 TIMP4Q99727 224 aa11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 PRSS27Q9BQR3 290 aa11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 PIGUQ9H490 435 aa11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 C20orf141Q9NUB4 165 aa11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 ARID1AO14497 2285 aa11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 SNTNA6NMZ2 147 aa11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 GPR171O14626 319 aa11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 SHOXO15266 292 aa11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 GMDSO60547 372 aa11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 HTR2AP28223 471 aa11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 PYCR1P32322 319 aa11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 TSFMP43897 325 aaKnown RBP11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 ARFIP1P53367 373 aa11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 KIAA1024LP59773 190 aa11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 TSPAN5P62079 268 aa11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 GALEQ14376 348 aa11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 DECR1Q16698 335 aa11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 BICRALQ6AI39 1079 aa11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 SFXN4Q6P4A7 337 aa11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 CXXC5Q7LFL8 322 aaKnown RBP11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 YAF2Q8IY57 180 aa11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 MS4A15Q8N5U1 240 aa11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 TMEM52Q8NDY8 209 aa11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 PIGXQ8TBF5 258 aa11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 RELTQ969Z4 430 aa11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 GPR174Q9BXC1 333 aa11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 WBP1LQ9NX94 342 aa11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 NTMQ9P121 344 aa11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 SIX6O95475 246 aa11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 HLA-DQB1P01920 261 aa11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 SMIM10L1P0DMW3 83 aa11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 ACSL1P33121 698 aa11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 EEF1A1P68104 462 aaKnown RBP11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 PLAURQ03405 335 aa11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 GRK1Q15835 563 aa11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 SLC36A2Q495M3 483 aa11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 FCRL6Q6DN72 434 aa11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 ENPP7Q6UWV6 458 aa11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 ALKAL2Q6UX46 152 aa11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 MBOAT2Q6ZWT7 520 aa11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 ASPGQ86U10 573 aa11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 OR2L13Q8N349 312 aa11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 LRRC25Q8N386 305 aaPredicted RBP11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 SRFBP1Q8NEF9 429 aaKnown RBP11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 OR5M3Q8NGP4 307 aa11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 OR5W2Q8NH69 310 aa11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 PFN4Q8NHR9 129 aa11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 GAL3ST3Q96A11 431 aa11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 TM4SF19Q96DZ7 209 aa11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 SMIM10Q96HG1 83 aa11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 CXorf58Q96LI9 332 aa11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 OR2M4Q96R27 311 aa11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 NKX3-1Q99801 234 aaPredicted RBP11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 ZNF559Q9BR84 538 aa11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 SEMA4CQ9C0C4 833 aa11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 TMEM168Q9H0V1 697 aa11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 DPAGT1Q9H3H5 408 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms