RNA–Protein interactions for RNA: ENST00000538129.1

DDB1-210, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-210ENST00000538129 KCNE3Q9Y6H6 103 aa5.39□□□□□ -1.55
DDB1-210ENST00000538129 TENM4Q6N022 2769 aa5.38□□□□□ -1.55
DDB1-210ENST00000538129 TRBV5-3A0A0A0MS03 114 aa5.38□□□□□ -1.55
DDB1-210ENST00000538129 TRGV5A0A0B4J1U4 118 aa5.38□□□□□ -1.55
DDB1-210ENST00000538129 LOC100653049A0A140TA62 436 aa5.38□□□□□ -1.55
DDB1-210ENST00000538129 A0A1B0GTH9 108 aa5.38□□□□□ -1.55
DDB1-210ENST00000538129 A0A1B0GUH1 482 aa5.38□□□□□ -1.55
DDB1-210ENST00000538129 TMEM247A6NEH6 219 aa5.38□□□□□ -1.55
DDB1-210ENST00000538129 FAM166BA8MTA8 275 aa5.38□□□□□ -1.55
DDB1-210ENST00000538129 BBIP1A8MTZ0 92 aa5.38□□□□□ -1.55
DDB1-210ENST00000538129 ADAM10O14672 748 aa5.38□□□□□ -1.55
DDB1-210ENST00000538129 TRAPPC6AO75865 159 aa5.38□□□□□ -1.55
DDB1-210ENST00000538129 KRT34O76011 436 aa5.38□□□□□ -1.55
DDB1-210ENST00000538129 WISP2O76076 250 aa5.38□□□□□ -1.55
DDB1-210ENST00000538129 PDE9AO76083 593 aa5.38□□□□□ -1.55
DDB1-210ENST00000538129 OXSR1O95747 527 aaPredicted RBP5.38□□□□□ -1.55
DDB1-210ENST00000538129 ANGPTL1O95841 491 aa5.38□□□□□ -1.55
DDB1-210ENST00000538129 C1QCP02747 245 aa5.38□□□□□ -1.55
DDB1-210ENST00000538129 STSP08842 583 aa5.38□□□□□ -1.55
DDB1-210ENST00000538129 NR2F1P10589 423 aa5.38□□□□□ -1.55
DDB1-210ENST00000538129 GPX2P18283 190 aa5.38□□□□□ -1.55
DDB1-210ENST00000538129 GNLYP22749 145 aa5.38□□□□□ -1.55
DDB1-210ENST00000538129 GDF1P27539 372 aa5.38□□□□□ -1.55
DDB1-210ENST00000538129 SRD5A2P31213 254 aa5.38□□□□□ -1.55
DDB1-210ENST00000538129 PTGS2P35354 604 aa5.38□□□□□ -1.55
DDB1-210ENST00000538129 CRATP43155 626 aa5.38□□□□□ -1.55
DDB1-210ENST00000538129 MAGEA5P43359 124 aa5.38□□□□□ -1.55
DDB1-210ENST00000538129 CASP9P55211 416 aa5.38□□□□□ -1.55
DDB1-210ENST00000538129 DSTNP60981 165 aa5.38□□□□□ -1.55
DDB1-210ENST00000538129 SF3A3Q12874 501 aaKnown RBP eCLIP5.38□□□□□ -1.55
DDB1-210ENST00000538129 FADDQ13158 208 aa5.38□□□□□ -1.55
DDB1-210ENST00000538129 CYLC2Q14093 348 aaPredicted RBP5.38□□□□□ -1.55
DDB1-210ENST00000538129 RGNQ15493 299 aa5.38□□□□□ -1.55
DDB1-210ENST00000538129 ZNF141Q15928 474 aa5.38□□□□□ -1.55
DDB1-210ENST00000538129 ZNF630Q2M218 657 aaPredicted RBP5.38□□□□□ -1.55
DDB1-210ENST00000538129 EIF2S3LQ2VIR3 472 aaKnown RBP5.38□□□□□ -1.55
DDB1-210ENST00000538129 GLYR1Q49A26 553 aaPredicted RBP5.38□□□□□ -1.55
DDB1-210ENST00000538129 FLYWCH1Q4VC44 716 aa5.38□□□□□ -1.55
DDB1-210ENST00000538129 GPAT3Q53EU6 434 aa5.38□□□□□ -1.55
DDB1-210ENST00000538129 RUNDC3AQ59EK9 446 aa5.38□□□□□ -1.55
DDB1-210ENST00000538129 NHSL2Q5HYW2 709 aa5.38□□□□□ -1.55
DDB1-210ENST00000538129 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.38□□□□□ -1.55
DDB1-210ENST00000538129 PRAMEF8Q5VWM4 474 aa5.38□□□□□ -1.55
DDB1-210ENST00000538129 PRAMEF7Q5VXH5 474 aa5.38□□□□□ -1.55
DDB1-210ENST00000538129 TYW3Q6IPR3 259 aaKnown RBP5.38□□□□□ -1.55
DDB1-210ENST00000538129 TNFAIP8L2Q6P589 184 aaPredicted RBP5.38□□□□□ -1.55
DDB1-210ENST00000538129 Q6ZPB1 254 aaPredicted RBP5.38□□□□□ -1.55
DDB1-210ENST00000538129 LRRC74BQ6ZQY2 392 aa5.38□□□□□ -1.55
DDB1-210ENST00000538129 MSRB3Q8IXL7 192 aa5.38□□□□□ -1.55
DDB1-210ENST00000538129 FADS6Q8N9I5 356 aa5.38□□□□□ -1.55
DDB1-210ENST00000538129 PCYOX1LQ8NBM8 494 aa5.38□□□□□ -1.55
DDB1-210ENST00000538129 RP9Q8TA86 221 aaKnown RBP5.38□□□□□ -1.55
DDB1-210ENST00000538129 PNPT1Q8TCS8 783 aaKnown RBP5.38□□□□□ -1.55
DDB1-210ENST00000538129 SLC38A5Q8WUX1 472 aa5.38□□□□□ -1.55
DDB1-210ENST00000538129 OTUB1Q96FW1 271 aaPredicted RBP5.38□□□□□ -1.55
DDB1-210ENST00000538129 RAX2Q96IS3 184 aa5.38□□□□□ -1.55
DDB1-210ENST00000538129 ANKRD27Q96NW4 1050 aa5.38□□□□□ -1.55
DDB1-210ENST00000538129 CCT8L2Q96SF2 557 aa5.38□□□□□ -1.55
DDB1-210ENST00000538129 CCDC106Q9BWC9 280 aa5.38□□□□□ -1.55
DDB1-210ENST00000538129 RTN4RQ9BZR6 473 aa5.38□□□□□ -1.55
DDB1-210ENST00000538129 ZNF350Q9GZX5 532 aa5.38□□□□□ -1.55
DDB1-210ENST00000538129 FAM107BQ9H098 131 aa5.38□□□□□ -1.55
DDB1-210ENST00000538129 LDAHQ9H6V9 325 aa5.38□□□□□ -1.55
DDB1-210ENST00000538129 GALNT9Q9HCQ5 603 aa5.38□□□□□ -1.55
DDB1-210ENST00000538129 SLC25A37Q9NYZ2 338 aa5.38□□□□□ -1.55
DDB1-210ENST00000538129 CALML5Q9NZT1 146 aa5.38□□□□□ -1.55
DDB1-210ENST00000538129 FLRT3Q9NZU0 649 aa5.38□□□□□ -1.55
DDB1-210ENST00000538129 VAPAQ9P0L0 249 aa5.38□□□□□ -1.55
DDB1-210ENST00000538129 PPP4R1LQ9P1A2 415 aa5.38□□□□□ -1.55
DDB1-210ENST00000538129 ADAM21Q9UKJ8 722 aa5.38□□□□□ -1.55
DDB1-210ENST00000538129 PRDM4Q9UKN5 801 aa5.38□□□□□ -1.55
DDB1-210ENST00000538129 MKLN1Q9UL63 735 aa5.38□□□□□ -1.55
DDB1-210ENST00000538129 EDARQ9UNE0 448 aa5.38□□□□□ -1.55
DDB1-210ENST00000538129 ARL2BPQ9Y2Y0 163 aa5.38□□□□□ -1.55
DDB1-210ENST00000538129 WDR45Q9Y484 360 aa5.38□□□□□ -1.55
DDB1-210ENST00000538129 DTNAQ9Y4J8 743 aa5.38□□□□□ -1.55
DDB1-210ENST00000538129 CAPN7Q9Y6W3 813 aa5.38□□□□□ -1.55
DDB1-210ENST00000538129 FLNBO75369 2602 aaKnown RBP5.38□□□□□ -1.55
DDB1-210ENST00000538129 MAST4O15021 2626 aa5.37□□□□□ -1.55
DDB1-210ENST00000538129 PHF3Q92576 2039 aaKnown RBP5.37□□□□□ -1.55
DDB1-210ENST00000538129 A0A087WZY1 265 aa5.37□□□□□ -1.55
DDB1-210ENST00000538129 A0A0G2JPF8 293 aa5.37□□□□□ -1.55
DDB1-210ENST00000538129 SERINC4A6NH21 518 aa5.37□□□□□ -1.55
DDB1-210ENST00000538129 AGAP5A6NIR3 686 aa5.37□□□□□ -1.55
DDB1-210ENST00000538129 HNRNPCL2B2RXH8 293 aa5.37□□□□□ -1.55
DDB1-210ENST00000538129 HNRNPCL3B7ZW38 293 aa5.37□□□□□ -1.55
DDB1-210ENST00000538129 GTPBP1O00178 669 aaKnown RBP5.37□□□□□ -1.55
DDB1-210ENST00000538129 FBP2O00757 339 aa5.37□□□□□ -1.55
DDB1-210ENST00000538129 PRRG2O14669 202 aa5.37□□□□□ -1.55
DDB1-210ENST00000538129 BCKDKO14874 412 aa5.37□□□□□ -1.55
DDB1-210ENST00000538129 SCO2O43819 266 aa5.37□□□□□ -1.55
DDB1-210ENST00000538129 ZIC3O60481 467 aa5.37□□□□□ -1.55
DDB1-210ENST00000538129 CDC40O60508 579 aaKnown RBP eCLIP5.37□□□□□ -1.55
DDB1-210ENST00000538129 EIF4E2O60573 245 aaKnown RBP5.37□□□□□ -1.55
DDB1-210ENST00000538129 SLC19A2O60779 497 aa5.37□□□□□ -1.55
DDB1-210ENST00000538129 HNRNPCL1O60812 293 aaKnown RBP5.37□□□□□ -1.55
DDB1-210ENST00000538129 SHOX2O60902 331 aaPredicted RBP5.37□□□□□ -1.55
DDB1-210ENST00000538129 UGT2B17O75795 530 aa5.37□□□□□ -1.55
DDB1-210ENST00000538129 H6PDO95479 791 aa5.37□□□□□ -1.55
DDB1-210ENST00000538129 FAM107AO95990 144 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms