RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, human

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKDC-206	ENST00000536429	ARAF	P10398	606 aa		11.75	□□□□□ -0.53
PRKDC-206	ENST00000536429	PRG2	P13727	222 aa		11.75	□□□□□ -0.53
PRKDC-206	ENST00000536429	CCNA2	P20248	432 aa		11.75	□□□□□ -0.53
PRKDC-206	ENST00000536429	SLC7A1	P30825	629 aa		11.75	□□□□□ -0.53
PRKDC-206	ENST00000536429	CCKAR	P32238	428 aa		11.75	□□□□□ -0.53
PRKDC-206	ENST00000536429	ACAA2	P42765	397 aa	Known RBP	11.75	□□□□□ -0.53
PRKDC-206	ENST00000536429	ARFIP2	P53365	341 aa		11.75	□□□□□ -0.53
PRKDC-206	ENST00000536429	SORD	Q00796	357 aa		11.75	□□□□□ -0.53
PRKDC-206	ENST00000536429	FADD	Q13158	208 aa		11.75	□□□□□ -0.53
PRKDC-206	ENST00000536429	ADRM1	Q16186	407 aa		11.75	□□□□□ -0.53
PRKDC-206	ENST00000536429	LIN52	Q52LA3	116 aa		11.75	□□□□□ -0.53
PRKDC-206	ENST00000536429	RUNDC3A	Q59EK9	446 aa		11.75	□□□□□ -0.53
PRKDC-206	ENST00000536429	PDSS1	Q5T2R2	415 aa		11.75	□□□□□ -0.53
PRKDC-206	ENST00000536429	GCNT6	Q5T4J0	391 aa		11.75	□□□□□ -0.53
PRKDC-206	ENST00000536429	GRINA	Q7Z429	371 aa		11.75	□□□□□ -0.53
PRKDC-206	ENST00000536429	DHDDS	Q86SQ9	333 aa		11.75	□□□□□ -0.53
PRKDC-206	ENST00000536429	ADGRG3	Q86Y34	549 aa		11.75	□□□□□ -0.53
PRKDC-206	ENST00000536429	TMEM234	Q8WY98	164 aa		11.75	□□□□□ -0.53
PRKDC-206	ENST00000536429	NRGN	Q92686	78 aa		11.75	□□□□□ -0.53
PRKDC-206	ENST00000536429	LRRC46	Q96FV0	321 aa		11.75	□□□□□ -0.53
PRKDC-206	ENST00000536429	GMPPA	Q96IJ6	420 aa	Predicted RBP	11.75	□□□□□ -0.53
PRKDC-206	ENST00000536429	ARL5B	Q96KC2	179 aa		11.75	□□□□□ -0.53
PRKDC-206	ENST00000536429	GPATCH1	Q9BRR8	931 aa	Known RBP	11.75	□□□□□ -0.53
PRKDC-206	ENST00000536429	OR11A1	Q9GZK7	315 aa		11.75	□□□□□ -0.53
PRKDC-206	ENST00000536429	CCDC134	Q9H6E4	229 aa		11.75	□□□□□ -0.53
PRKDC-206	ENST00000536429	CALML5	Q9NZT1	146 aa		11.75	□□□□□ -0.53
PRKDC-206	ENST00000536429	LEF1	Q9UJU2	399 aa	Predicted RBP	11.75	□□□□□ -0.53
PRKDC-206	ENST00000536429	ING1	Q9UK53	422 aa	Predicted RBP	11.75	□□□□□ -0.53
PRKDC-206	ENST00000536429	PROCR	Q9UNN8	238 aa		11.75	□□□□□ -0.53
PRKDC-206	ENST00000536429	NDUFAF1	Q9Y375	327 aa		11.75	□□□□□ -0.53
PRKDC-206	ENST00000536429	GMEB1	Q9Y692	573 aa		11.75	□□□□□ -0.53
PRKDC-206	ENST00000536429	AKAP6	Q13023	2319 aa		11.75	□□□□□ -0.53
PRKDC-206	ENST00000536429	HRNR	Q86YZ3	2850 aa	Predicted RBP	11.74	□□□□□ -0.53
PRKDC-206	ENST00000536429		A0A0G2JPF8	293 aa		11.74	□□□□□ -0.53
PRKDC-206	ENST00000536429	TMEM72	A0PK05	275 aa		11.74	□□□□□ -0.53
PRKDC-206	ENST00000536429	TUBAL3	A6NHL2	446 aa		11.74	□□□□□ -0.53
PRKDC-206	ENST00000536429	HNRNPCL2	B2RXH8	293 aa		11.74	□□□□□ -0.53
PRKDC-206	ENST00000536429	HNRNPCL3	B7ZW38	293 aa		11.74	□□□□□ -0.53
PRKDC-206	ENST00000536429	FBP2	O00757	339 aa		11.74	□□□□□ -0.53
PRKDC-206	ENST00000536429	SMAD9	O15198	467 aa	Known RBP	11.74	□□□□□ -0.53
PRKDC-206	ENST00000536429	HNRNPCL1	O60812	293 aa	Known RBP	11.74	□□□□□ -0.53
PRKDC-206	ENST00000536429	PGM3	O95394	542 aa		11.74	□□□□□ -0.53
PRKDC-206	ENST00000536429	PLG	P00747	810 aa	Predicted RBP	11.74	□□□□□ -0.53
PRKDC-206	ENST00000536429	HNRNPCL4	P0DMR1	293 aa		11.74	□□□□□ -0.53
PRKDC-206	ENST00000536429	TROVE2	P10155	538 aa	Known RBP eCLIP	11.74	□□□□□ -0.53
PRKDC-206	ENST00000536429	CD8B	P10966	210 aa		11.74	□□□□□ -0.53
PRKDC-206	ENST00000536429	AGTR1	P30556	359 aa		11.74	□□□□□ -0.53
PRKDC-206	ENST00000536429	MDH1	P40925	334 aa	Known RBP	11.74	□□□□□ -0.53
PRKDC-206	ENST00000536429	MTPN	P58546	118 aa		11.74	□□□□□ -0.53
PRKDC-206	ENST00000536429	HOXC5	Q00444	222 aa		11.74	□□□□□ -0.53
PRKDC-206	ENST00000536429	GNA13	Q14344	377 aa		11.74	□□□□□ -0.53
PRKDC-206	ENST00000536429	CAPRIN1	Q14444	709 aa	Known RBP	11.74	□□□□□ -0.53
PRKDC-206	ENST00000536429	EXOC3L2	Q2M3D2	409 aa		11.74	□□□□□ -0.53
PRKDC-206	ENST00000536429	SYT14P1	Q58G82	188 aa		11.74	□□□□□ -0.53
PRKDC-206	ENST00000536429	RNF220	Q5VTB9	566 aa		11.74	□□□□□ -0.53
PRKDC-206	ENST00000536429	EEF1A1P5	Q5VTE0	462 aa		11.74	□□□□□ -0.53
PRKDC-206	ENST00000536429	METTL21C	Q5VZV1	264 aa		11.74	□□□□□ -0.53
PRKDC-206	ENST00000536429	FCRLA	Q7L513	359 aa		11.74	□□□□□ -0.53
PRKDC-206	ENST00000536429	NUFIP2	Q7Z417	695 aa	Known RBP	11.74	□□□□□ -0.53
PRKDC-206	ENST00000536429	SERPINA11	Q86U17	422 aa		11.74	□□□□□ -0.53
PRKDC-206	ENST00000536429	TMEM200A	Q86VY9	491 aa		11.74	□□□□□ -0.53
PRKDC-206	ENST00000536429	KIF18B	Q86Y91	864 aa		11.74	□□□□□ -0.53
PRKDC-206	ENST00000536429	TUSC5	Q8IXB3	177 aa		11.74	□□□□□ -0.53
PRKDC-206	ENST00000536429	DPP10	Q8N608	796 aa		11.74	□□□□□ -0.53
PRKDC-206	ENST00000536429	OR6K3	Q8NGY3	331 aa		11.74	□□□□□ -0.53
PRKDC-206	ENST00000536429	PMM1	Q92871	262 aa		11.74	□□□□□ -0.53
PRKDC-206	ENST00000536429	CPNE4	Q96A23	557 aa	Predicted RBP	11.74	□□□□□ -0.53
PRKDC-206	ENST00000536429	ZNF317	Q96PQ6	595 aa	Predicted RBP	11.74	□□□□□ -0.53
PRKDC-206	ENST00000536429	RAD21L1	Q9H4I0	556 aa		11.74	□□□□□ -0.53
PRKDC-206	ENST00000536429	C12orf49	Q9H741	205 aa		11.74	□□□□□ -0.53
PRKDC-206	ENST00000536429	BCL2L10	Q9HD36	194 aa		11.74	□□□□□ -0.53
PRKDC-206	ENST00000536429	SAR1A	Q9NR31	198 aa		11.74	□□□□□ -0.53
PRKDC-206	ENST00000536429	THUMPD1	Q9NXG2	353 aa	Known RBP	11.74	□□□□□ -0.53
PRKDC-206	ENST00000536429	CHRNA9	Q9UGM1	479 aa		11.74	□□□□□ -0.53
PRKDC-206	ENST00000536429	OSGIN1	Q9UJX0	560 aa		11.74	□□□□□ -0.53
PRKDC-206	ENST00000536429	EMC9	Q9Y3B6	208 aa		11.74	□□□□□ -0.53
PRKDC-206	ENST00000536429	TMED7-TICAM2	A0A0A6YYA0	188 aa		11.73	□□□□□ -0.53
PRKDC-206	ENST00000536429	ZC3H12D	A2A288	527 aa	Known RBP	11.73	□□□□□ -0.53
PRKDC-206	ENST00000536429	FAM221A	A4D161	298 aa		11.73	□□□□□ -0.53
PRKDC-206	ENST00000536429	ZNF814	B7Z6K7	855 aa		11.73	□□□□□ -0.53
PRKDC-206	ENST00000536429	C5orf58	C9J3I9	102 aa		11.73	□□□□□ -0.53
PRKDC-206	ENST00000536429	ANGPT2	O15123	496 aa		11.73	□□□□□ -0.53
PRKDC-206	ENST00000536429	CTAG2	O75638	210 aa		11.73	□□□□□ -0.53
PRKDC-206	ENST00000536429	FES	P07332	822 aa		11.73	□□□□□ -0.53
PRKDC-206	ENST00000536429	THBS1	P07996	1170 aa		11.73	□□□□□ -0.53
PRKDC-206	ENST00000536429	PABPC4L	P0CB38	370 aa	Known RBP	11.73	□□□□□ -0.53
PRKDC-206	ENST00000536429	TFPI	P10646	304 aa		11.73	□□□□□ -0.53
PRKDC-206	ENST00000536429	GPX2	P18283	190 aa		11.73	□□□□□ -0.53
PRKDC-206	ENST00000536429	EDNRA	P25101	427 aa		11.73	□□□□□ -0.53
PRKDC-206	ENST00000536429	TACR3	P29371	465 aa		11.73	□□□□□ -0.53
PRKDC-206	ENST00000536429	APOBEC1	P41238	236 aa	Known RBP	11.73	□□□□□ -0.53
PRKDC-206	ENST00000536429	SLC1A3	P43003	542 aa		11.73	□□□□□ -0.53
PRKDC-206	ENST00000536429	DIO1	P49895	249 aa		11.73	□□□□□ -0.53
PRKDC-206	ENST00000536429	CTBP2	P56545	445 aa		11.73	□□□□□ -0.53
PRKDC-206	ENST00000536429	RAC3	P60763	192 aa		11.73	□□□□□ -0.53
PRKDC-206	ENST00000536429	ABCA4	P78363	2273 aa		11.73	□□□□□ -0.53
PRKDC-206	ENST00000536429	CDK6	Q00534	326 aa		11.73	□□□□□ -0.53
PRKDC-206	ENST00000536429	KLF10	Q13118	480 aa		11.73	□□□□□ -0.53
PRKDC-206	ENST00000536429	NFYC	Q13952	458 aa		11.73	□□□□□ -0.53
PRKDC-206	ENST00000536429	ZNF311	Q5JNZ3	666 aa		11.73	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms