RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.7□□□□□ -1.18
SFSWAP-202ENST00000535202 A0A1W2PNV4 684 aa7.7□□□□□ -1.18
SFSWAP-202ENST00000535202 OR2M5A3KFT3 312 aa7.7□□□□□ -1.18
SFSWAP-202ENST00000535202 WDR91A4D1P6 747 aa7.7□□□□□ -1.18
SFSWAP-202ENST00000535202 SLC22A20A6NK97 555 aa7.7□□□□□ -1.18
SFSWAP-202ENST00000535202 SHISA8B8ZZ34 492 aa7.7□□□□□ -1.18
SFSWAP-202ENST00000535202 H0YC42 278 aa7.7□□□□□ -1.18
SFSWAP-202ENST00000535202 DEAF1O75398 565 aaPredicted RBP7.7□□□□□ -1.18
SFSWAP-202ENST00000535202 ATE1O95260 518 aa7.7□□□□□ -1.18
SFSWAP-202ENST00000535202 TFPTP0C1Z6 253 aa7.7□□□□□ -1.18
SFSWAP-202ENST00000535202 EPXP11678 715 aa7.7□□□□□ -1.18
SFSWAP-202ENST00000535202 COX4I1P13073 169 aa7.7□□□□□ -1.18
SFSWAP-202ENST00000535202 CD1EP15812 388 aa7.7□□□□□ -1.18
SFSWAP-202ENST00000535202 ARRB2P32121 409 aa7.7□□□□□ -1.18
SFSWAP-202ENST00000535202 SERPINB5P36952 375 aa7.7□□□□□ -1.18
SFSWAP-202ENST00000535202 RPL3P39023 403 aaKnown RBP7.7□□□□□ -1.18
SFSWAP-202ENST00000535202 FRKP42685 505 aaPredicted RBP7.7□□□□□ -1.18
SFSWAP-202ENST00000535202 PRIM2P49643 509 aa7.7□□□□□ -1.18
SFSWAP-202ENST00000535202 SUCLG1P53597 346 aaKnown RBP7.7□□□□□ -1.18
SFSWAP-202ENST00000535202 DIO3P55073 304 aa7.7□□□□□ -1.18
SFSWAP-202ENST00000535202 TPD52P55327 224 aaPredicted RBP7.7□□□□□ -1.18
SFSWAP-202ENST00000535202 EEFSECP57772 596 aaKnown RBP7.7□□□□□ -1.18
SFSWAP-202ENST00000535202 PRR5P85299 388 aa7.7□□□□□ -1.18
SFSWAP-202ENST00000535202 SORDQ00796 357 aa7.7□□□□□ -1.18
SFSWAP-202ENST00000535202 C17orf67Q0P5P2 114 aa7.7□□□□□ -1.18
SFSWAP-202ENST00000535202 TRAP1Q12931 704 aaKnown RBP7.7□□□□□ -1.18
SFSWAP-202ENST00000535202 FLOT2Q14254 428 aa7.7□□□□□ -1.18
SFSWAP-202ENST00000535202 DUSP5Q16690 384 aa7.7□□□□□ -1.18
SFSWAP-202ENST00000535202 XKR7Q5GH72 579 aa7.7□□□□□ -1.18
SFSWAP-202ENST00000535202 INTS11Q5TA45 600 aaKnown RBP7.7□□□□□ -1.18
SFSWAP-202ENST00000535202 OGFOD2Q6N063 350 aa7.7□□□□□ -1.18
SFSWAP-202ENST00000535202 MFSD12Q6NUT3 480 aa7.7□□□□□ -1.18
SFSWAP-202ENST00000535202 VWA1Q6PCB0 445 aa7.7□□□□□ -1.18
SFSWAP-202ENST00000535202 APOOLQ6UXV4 268 aa7.7□□□□□ -1.18
SFSWAP-202ENST00000535202 SPNS3Q6ZMD2 512 aa7.7□□□□□ -1.18
SFSWAP-202ENST00000535202 AKAP14Q86UN6 197 aa7.7□□□□□ -1.18
SFSWAP-202ENST00000535202 CDC20BQ86Y33 519 aa7.7□□□□□ -1.18
SFSWAP-202ENST00000535202 NUDCD3Q8IVD9 361 aa7.7□□□□□ -1.18
SFSWAP-202ENST00000535202 PGAM4Q8N0Y7 254 aa7.7□□□□□ -1.18
SFSWAP-202ENST00000535202 LSMEM1Q8N8F7 131 aa7.7□□□□□ -1.18
SFSWAP-202ENST00000535202 COX18Q8N8Q8 333 aa7.7□□□□□ -1.18
SFSWAP-202ENST00000535202 CNEP1R1Q8N9A8 125 aa7.7□□□□□ -1.18
SFSWAP-202ENST00000535202 FNDC5Q8NAU1 212 aa7.7□□□□□ -1.18
SFSWAP-202ENST00000535202 SLC16A11Q8NCK7 471 aa7.7□□□□□ -1.18
SFSWAP-202ENST00000535202 TOR1AIP2Q8NFQ8 470 aa7.7□□□□□ -1.18
SFSWAP-202ENST00000535202 OR7A2PQ8NGA2 310 aa7.7□□□□□ -1.18
SFSWAP-202ENST00000535202 GRPEL2Q8TAA5 225 aa7.7□□□□□ -1.18
SFSWAP-202ENST00000535202 PIWIL2Q8TC59 973 aaKnown RBP7.7□□□□□ -1.18
SFSWAP-202ENST00000535202 FIG4Q92562 907 aa7.7□□□□□ -1.18
SFSWAP-202ENST00000535202 TFAP2CQ92754 450 aa7.7□□□□□ -1.18
SFSWAP-202ENST00000535202 HOXB13Q92826 284 aaPredicted RBP7.7□□□□□ -1.18
SFSWAP-202ENST00000535202 HPS1Q92902 700 aa7.7□□□□□ -1.18
SFSWAP-202ENST00000535202 TMIGD2Q96BF3 282 aa7.7□□□□□ -1.18
SFSWAP-202ENST00000535202 MTERF3Q96E29 417 aa7.7□□□□□ -1.18
SFSWAP-202ENST00000535202 GIMAP5Q96F15 307 aa7.7□□□□□ -1.18
SFSWAP-202ENST00000535202 C16orf58Q96GQ5 468 aa7.7□□□□□ -1.18
SFSWAP-202ENST00000535202 C3orf30Q96M34 536 aa7.7□□□□□ -1.18
SFSWAP-202ENST00000535202 PIGQQ9BRB3 760 aa7.7□□□□□ -1.18
SFSWAP-202ENST00000535202 AIFM2Q9BRQ8 373 aa7.7□□□□□ -1.18
SFSWAP-202ENST00000535202 PINK1Q9BXM7 581 aa7.7□□□□□ -1.18
SFSWAP-202ENST00000535202 PIGMQ9H3S5 423 aa7.7□□□□□ -1.18
SFSWAP-202ENST00000535202 LIME1Q9H400 295 aa7.7□□□□□ -1.18
SFSWAP-202ENST00000535202 ARMC7Q9H6L4 198 aa7.7□□□□□ -1.18
SFSWAP-202ENST00000535202 ZCCHC3Q9NUD5 404 aaKnown RBP7.7□□□□□ -1.18
SFSWAP-202ENST00000535202 CCM2LQ9NUG4 571 aaPredicted RBP7.7□□□□□ -1.18
SFSWAP-202ENST00000535202 ATP6V1HQ9UI12 483 aa7.7□□□□□ -1.18
SFSWAP-202ENST00000535202 ZDHHC2Q9UIJ5 367 aa7.7□□□□□ -1.18
SFSWAP-202ENST00000535202 ST6GALNAC2Q9UJ37 374 aa7.7□□□□□ -1.18
SFSWAP-202ENST00000535202 FBXO9Q9UK97 447 aaPredicted RBP7.7□□□□□ -1.18
SFSWAP-202ENST00000535202 PACSIN3Q9UKS6 424 aa7.7□□□□□ -1.18
SFSWAP-202ENST00000535202 PLEKHA6Q9Y2H5 1048 aa7.7□□□□□ -1.18
SFSWAP-202ENST00000535202 ZNF337Q9Y3M9 751 aa7.7□□□□□ -1.18
SFSWAP-202ENST00000535202 SNX8Q9Y5X2 465 aa7.7□□□□□ -1.18
SFSWAP-202ENST00000535202 ANKRD17O75179 2603 aaKnown RBP7.69□□□□□ -1.18
SFSWAP-202ENST00000535202 OTOGQ6ZRI0 2925 aa7.69□□□□□ -1.18
SFSWAP-202ENST00000535202 MPDZO75970 2070 aa7.69□□□□□ -1.18
SFSWAP-202ENST00000535202 IGLV3-32A0A0A0MS00 114 aa7.69□□□□□ -1.18
SFSWAP-202ENST00000535202 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.69□□□□□ -1.18
SFSWAP-202ENST00000535202 A0A1W2PRB8 838 aa7.69□□□□□ -1.18
SFSWAP-202ENST00000535202 FAM221AA4D161 298 aa7.69□□□□□ -1.18
SFSWAP-202ENST00000535202 ALG1L2C9J202 215 aa7.69□□□□□ -1.18
SFSWAP-202ENST00000535202 LINC01387J3KSC0 135 aa7.69□□□□□ -1.18
SFSWAP-202ENST00000535202 LYPLA1O75608 230 aaPredicted RBP7.69□□□□□ -1.18
SFSWAP-202ENST00000535202 TNFSF13O75888 250 aa7.69□□□□□ -1.18
SFSWAP-202ENST00000535202 KCNK2O95069 426 aa7.69□□□□□ -1.18
SFSWAP-202ENST00000535202 STAMBPO95630 424 aa7.69□□□□□ -1.18
SFSWAP-202ENST00000535202 C6orf47O95873 294 aa7.69□□□□□ -1.18
SFSWAP-202ENST00000535202 LAMP1P11279 417 aa7.69□□□□□ -1.18
SFSWAP-202ENST00000535202 BMP2P12643 396 aa7.69□□□□□ -1.18
SFSWAP-202ENST00000535202 HPGDP15428 266 aa7.69□□□□□ -1.18
SFSWAP-202ENST00000535202 PRKACBP22694 351 aa7.69□□□□□ -1.18
SFSWAP-202ENST00000535202 ME2P23368 584 aa7.69□□□□□ -1.18
SFSWAP-202ENST00000535202 DNASE1P24855 282 aa7.69□□□□□ -1.18
SFSWAP-202ENST00000535202 MAP3K8P41279 467 aa7.69□□□□□ -1.18
SFSWAP-202ENST00000535202 NME5P56597 212 aa7.69□□□□□ -1.18
SFSWAP-202ENST00000535202 CLDN15P56746 228 aa7.69□□□□□ -1.18
SFSWAP-202ENST00000535202 CLDN20P56880 219 aa7.69□□□□□ -1.18
SFSWAP-202ENST00000535202 EEF1A1P68104 462 aaKnown RBP7.69□□□□□ -1.18
SFSWAP-202ENST00000535202 SIRPAP78324 504 aa7.69□□□□□ -1.18
SFSWAP-202ENST00000535202 POU6F2P78424 691 aaPredicted RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms