RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, human

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-238	ENST00000534647	MISP	Q8IVT2	679 aa		10.28	□□□□□ -0.76
CTNND1-238	ENST00000534647	GABRG1	Q8N1C3	465 aa		10.28	□□□□□ -0.76
CTNND1-238	ENST00000534647	LINC00528	Q8N1L1	170 aa		10.28	□□□□□ -0.76
CTNND1-238	ENST00000534647	GPR151	Q8TDV0	419 aa		10.28	□□□□□ -0.76
CTNND1-238	ENST00000534647	TWIST2	Q8WVJ9	160 aa		10.28	□□□□□ -0.76
CTNND1-238	ENST00000534647	HSD17B8	Q92506	261 aa		10.28	□□□□□ -0.76
CTNND1-238	ENST00000534647	AKAP1	Q92667	903 aa	Known RBP eCLIP	10.28	□□□□□ -0.76
CTNND1-238	ENST00000534647	OSTF1	Q92882	214 aa		10.28	□□□□□ -0.76
CTNND1-238	ENST00000534647	CMTM5	Q96DZ9	223 aa		10.28	□□□□□ -0.76
CTNND1-238	ENST00000534647	CCT7	Q99832	543 aa		10.28	□□□□□ -0.76
CTNND1-238	ENST00000534647	CCDC106	Q9BWC9	280 aa		10.28	□□□□□ -0.76
CTNND1-238	ENST00000534647	LRMDA	Q9H2I8	198 aa		10.28	□□□□□ -0.76
CTNND1-238	ENST00000534647	NGB	Q9NPG2	151 aa		10.28	□□□□□ -0.76
CTNND1-238	ENST00000534647	UBQLN4	Q9NRR5	601 aa		10.28	□□□□□ -0.76
CTNND1-238	ENST00000534647	MED17	Q9NVC6	651 aa		10.28	□□□□□ -0.76
CTNND1-238	ENST00000534647	ARL8B	Q9NVJ2	186 aa		10.28	□□□□□ -0.76
CTNND1-238	ENST00000534647	CLEC4A	Q9UMR7	237 aa		10.28	□□□□□ -0.76
CTNND1-238	ENST00000534647	LAMP3	Q9UQV4	416 aa		10.28	□□□□□ -0.76
CTNND1-238	ENST00000534647	VDAC3	Q9Y277	283 aa		10.28	□□□□□ -0.76
CTNND1-238	ENST00000534647	PCNX3	Q9H6A9	2034 aa		10.28	□□□□□ -0.76
CTNND1-238	ENST00000534647	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		10.27	□□□□□ -0.77
CTNND1-238	ENST00000534647	UBD	O15205	165 aa		10.27	□□□□□ -0.77
CTNND1-238	ENST00000534647	TLX2	O43763	284 aa	Predicted RBP	10.27	□□□□□ -0.77
CTNND1-238	ENST00000534647	PIP5K1C	O60331	668 aa		10.27	□□□□□ -0.77
CTNND1-238	ENST00000534647	ME2	P23368	584 aa		10.27	□□□□□ -0.77
CTNND1-238	ENST00000534647	ADH6	P28332	368 aa		10.27	□□□□□ -0.77
CTNND1-238	ENST00000534647	PRDX6	P30041	224 aa		10.27	□□□□□ -0.77
CTNND1-238	ENST00000534647	ZNF41	P51814	821 aa	Predicted RBP	10.27	□□□□□ -0.77
CTNND1-238	ENST00000534647	CARD18	P57730	90 aa		10.27	□□□□□ -0.77
CTNND1-238	ENST00000534647	STX1B	P61266	288 aa		10.27	□□□□□ -0.77
CTNND1-238	ENST00000534647	P2RY6	Q15077	328 aa		10.27	□□□□□ -0.77
CTNND1-238	ENST00000534647	RNPS1	Q15287	305 aa	Known RBP	10.27	□□□□□ -0.77
CTNND1-238	ENST00000534647	SFRP5	Q5T4F7	317 aa		10.27	□□□□□ -0.77
CTNND1-238	ENST00000534647	HBM	Q6B0K9	141 aa		10.27	□□□□□ -0.77
CTNND1-238	ENST00000534647	LRFN4	Q6PJG9	635 aa		10.27	□□□□□ -0.77
CTNND1-238	ENST00000534647	ZNF551	Q7Z340	670 aa	Predicted RBP	10.27	□□□□□ -0.77
CTNND1-238	ENST00000534647	ARHGAP24	Q8N264	748 aa		10.27	□□□□□ -0.77
CTNND1-238	ENST00000534647	POC1B	Q8TC44	478 aa		10.27	□□□□□ -0.77
CTNND1-238	ENST00000534647	RNF128	Q8TEB7	428 aa		10.27	□□□□□ -0.77
CTNND1-238	ENST00000534647	PIK3R3	Q92569	461 aa		10.27	□□□□□ -0.77
CTNND1-238	ENST00000534647	FBXW5	Q969U6	566 aa		10.27	□□□□□ -0.77
CTNND1-238	ENST00000534647	S100PBP	Q96BU1	408 aa		10.27	□□□□□ -0.77
CTNND1-238	ENST00000534647	GIMAP5	Q96F15	307 aa		10.27	□□□□□ -0.77
CTNND1-238	ENST00000534647	MAEL	Q96JY0	434 aa	Known RBP	10.27	□□□□□ -0.77
CTNND1-238	ENST00000534647	EGLN2	Q96KS0	407 aa		10.27	□□□□□ -0.77
CTNND1-238	ENST00000534647	DHRS1	Q96LJ7	313 aa		10.27	□□□□□ -0.77
CTNND1-238	ENST00000534647	RNF145	Q96MT1	663 aa		10.27	□□□□□ -0.77
CTNND1-238	ENST00000534647	NPAS1	Q99742	590 aa		10.27	□□□□□ -0.77
CTNND1-238	ENST00000534647	TACO1	Q9BSH4	297 aa	Known RBP	10.27	□□□□□ -0.77
CTNND1-238	ENST00000534647	REG4	Q9BYZ8	158 aa		10.27	□□□□□ -0.77
CTNND1-238	ENST00000534647	ESRP2	Q9H6T0	727 aa	Known RBP	10.27	□□□□□ -0.77
CTNND1-238	ENST00000534647	LRTM1	Q9HBL6	345 aa		10.27	□□□□□ -0.77
CTNND1-238	ENST00000534647	TIGAR	Q9NQ88	270 aa		10.27	□□□□□ -0.77
CTNND1-238	ENST00000534647	ACSS1	Q9NUB1	689 aa	Predicted RBP	10.27	□□□□□ -0.77
CTNND1-238	ENST00000534647	GIN1	Q9NXP7	522 aa		10.27	□□□□□ -0.77
CTNND1-238	ENST00000534647	RNF115	Q9Y4L5	304 aa		10.27	□□□□□ -0.77
CTNND1-238	ENST00000534647	HEATR5A	Q86XA9	2040 aa		10.27	□□□□□ -0.77
CTNND1-238	ENST00000534647		J3QW42	95 aa		10.26	□□□□□ -0.77
CTNND1-238	ENST00000534647	TNFSF11	O14788	317 aa		10.26	□□□□□ -0.77
CTNND1-238	ENST00000534647	PIP5K1B	O14986	540 aa		10.26	□□□□□ -0.77
CTNND1-238	ENST00000534647	GYG2	O15488	501 aa		10.26	□□□□□ -0.77
CTNND1-238	ENST00000534647	KCNK2	O95069	426 aa		10.26	□□□□□ -0.77
CTNND1-238	ENST00000534647	FES	P07332	822 aa		10.26	□□□□□ -0.77
CTNND1-238	ENST00000534647	SOD3	P08294	240 aa		10.26	□□□□□ -0.77
CTNND1-238	ENST00000534647	LINGO3	P0C6S8	592 aa		10.26	□□□□□ -0.77
CTNND1-238	ENST00000534647	T-ENOL	P0DO92	83 aa		10.26	□□□□□ -0.77
CTNND1-238	ENST00000534647	NQO1	P15559	274 aa	Known RBP	10.26	□□□□□ -0.77
CTNND1-238	ENST00000534647	ELK4	P28324	431 aa		10.26	□□□□□ -0.77
CTNND1-238	ENST00000534647	RFX3	P48380	749 aa		10.26	□□□□□ -0.77
CTNND1-238	ENST00000534647	MANF	P55145	182 aa	Known RBP	10.26	□□□□□ -0.77
CTNND1-238	ENST00000534647	IRX1	P78414	480 aa	Predicted RBP	10.26	□□□□□ -0.77
CTNND1-238	ENST00000534647	KLF10	Q13118	480 aa		10.26	□□□□□ -0.77
CTNND1-238	ENST00000534647	SQLE	Q14534	574 aa		10.26	□□□□□ -0.77
CTNND1-238	ENST00000534647	MAPRE2	Q15555	327 aa		10.26	□□□□□ -0.77
CTNND1-238	ENST00000534647	ZNF239	Q16600	458 aa	Known RBP	10.26	□□□□□ -0.77
CTNND1-238	ENST00000534647	IMPG1	Q17R60	797 aa		10.26	□□□□□ -0.77
CTNND1-238	ENST00000534647	UGT3A2	Q3SY77	523 aa		10.26	□□□□□ -0.77
CTNND1-238	ENST00000534647	FIGNL1	Q6PIW4	674 aa		10.26	□□□□□ -0.77
CTNND1-238	ENST00000534647	TFAP2E	Q6VUC0	442 aa		10.26	□□□□□ -0.77
CTNND1-238	ENST00000534647	RNF165	Q6ZSG1	346 aa		10.26	□□□□□ -0.77
CTNND1-238	ENST00000534647	SSX8	Q7RTT4	187 aa		10.26	□□□□□ -0.77
CTNND1-238	ENST00000534647	HIPK1	Q86Z02	1210 aa		10.26	□□□□□ -0.77
CTNND1-238	ENST00000534647	LILRA2	Q8N149	483 aa		10.26	□□□□□ -0.77
CTNND1-238	ENST00000534647	SLC16A11	Q8NCK7	471 aa		10.26	□□□□□ -0.77
CTNND1-238	ENST00000534647	ZFP28	Q8NHY6	868 aa		10.26	□□□□□ -0.77
CTNND1-238	ENST00000534647	CDC26	Q8NHZ8	85 aa		10.26	□□□□□ -0.77
CTNND1-238	ENST00000534647	SMAP2	Q8WU79	429 aa	Predicted RBP	10.26	□□□□□ -0.77
CTNND1-238	ENST00000534647	SLC9A6	Q92581	669 aa		10.26	□□□□□ -0.77
CTNND1-238	ENST00000534647	CPNE4	Q96A23	557 aa	Predicted RBP	10.26	□□□□□ -0.77
CTNND1-238	ENST00000534647	MCUR1	Q96AQ8	359 aa		10.26	□□□□□ -0.77
CTNND1-238	ENST00000534647	TUBGCP3	Q96CW5	907 aa		10.26	□□□□□ -0.77
CTNND1-238	ENST00000534647	ZBED6CL	Q96FA7	236 aa	Predicted RBP	10.26	□□□□□ -0.77
CTNND1-238	ENST00000534647	FCRL1	Q96LA6	429 aa		10.26	□□□□□ -0.77
CTNND1-238	ENST00000534647	KLHL15	Q96M94	604 aa		10.26	□□□□□ -0.77
CTNND1-238	ENST00000534647	TNFRSF12A	Q9NP84	129 aa		10.26	□□□□□ -0.77
CTNND1-238	ENST00000534647	FBXO34	Q9NWN3	711 aa		10.26	□□□□□ -0.77
CTNND1-238	ENST00000534647	POLR3H	Q9Y535	204 aa	Predicted RBP	10.26	□□□□□ -0.77
CTNND1-238	ENST00000534647	DNAJC15	Q9Y5T4	150 aa		10.26	□□□□□ -0.77
CTNND1-238	ENST00000534647	SON	P18583	2426 aa	Known RBP	10.26	□□□□□ -0.77
CTNND1-238	ENST00000534647	RTTN	Q86VV8	2226 aa		10.26	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms