RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 RFPL3O75679 317 aa12.27□□□□□ -0.44
BEST1-208ENST00000534553 CH25HO95992 272 aa12.27□□□□□ -0.44
BEST1-208ENST00000534553 NAGAP17050 411 aa12.27□□□□□ -0.44
BEST1-208ENST00000534553 ABCD3P28288 659 aa12.27□□□□□ -0.44
BEST1-208ENST00000534553 SLC1A3P43003 542 aa12.27□□□□□ -0.44
BEST1-208ENST00000534553 GAS1P54826 345 aa12.27□□□□□ -0.44
BEST1-208ENST00000534553 EMP2P54851 167 aa12.27□□□□□ -0.44
BEST1-208ENST00000534553 RNF4P78317 190 aa12.27□□□□□ -0.44
BEST1-208ENST00000534553 FOXK2Q01167 660 aa12.27□□□□□ -0.44
BEST1-208ENST00000534553 CD226Q15762 336 aa12.27□□□□□ -0.44
BEST1-208ENST00000534553 TSTQ16762 297 aaKnown RBP12.27□□□□□ -0.44
BEST1-208ENST00000534553 ATG4DQ86TL0 474 aaPredicted RBP12.27□□□□□ -0.44
BEST1-208ENST00000534553 TMCO5AQ8N6Q1 288 aa12.27□□□□□ -0.44
BEST1-208ENST00000534553 OR5L2Q8NGL0 311 aa12.27□□□□□ -0.44
BEST1-208ENST00000534553 NDNFQ8TB73 568 aa12.27□□□□□ -0.44
BEST1-208ENST00000534553 OMA1Q96E52 524 aa12.27□□□□□ -0.44
BEST1-208ENST00000534553 DACH2Q96NX9 599 aa12.27□□□□□ -0.44
BEST1-208ENST00000534553 LMF1Q96S06 567 aa12.27□□□□□ -0.44
BEST1-208ENST00000534553 LPAR4Q99677 370 aa12.27□□□□□ -0.44
BEST1-208ENST00000534553 SH3GL3Q99963 347 aa12.27□□□□□ -0.44
BEST1-208ENST00000534553 TBL1XR1Q9BZK7 514 aa12.27□□□□□ -0.44
BEST1-208ENST00000534553 HMG20AQ9NP66 347 aa12.27□□□□□ -0.44
BEST1-208ENST00000534553 WDR70Q9NW82 654 aa12.27□□□□□ -0.44
BEST1-208ENST00000534553 NDUFB11Q9NX14 153 aa12.27□□□□□ -0.44
BEST1-208ENST00000534553 TAS2R16Q9NYV7 291 aa12.27□□□□□ -0.44
BEST1-208ENST00000534553 KLHL21Q9UJP4 597 aa12.27□□□□□ -0.44
BEST1-208ENST00000534553 OSGIN1Q9UJX0 560 aa12.27□□□□□ -0.44
BEST1-208ENST00000534553 PCDHGB6Q9Y5F9 930 aa12.27□□□□□ -0.44
BEST1-208ENST00000534553 PCDHGA3Q9Y5H0 932 aa12.27□□□□□ -0.44
BEST1-208ENST00000534553 PRR23D1E9PI22 279 aaPredicted RBP12.27□□□□□ -0.45
BEST1-208ENST00000534553 NDUFB5O43674 189 aa12.27□□□□□ -0.45
BEST1-208ENST00000534553 IDH3BO43837 385 aa12.27□□□□□ -0.45
BEST1-208ENST00000534553 CDC40O60508 579 aaKnown RBP eCLIP12.27□□□□□ -0.45
BEST1-208ENST00000534553 ICOSLGO75144 302 aa12.27□□□□□ -0.45
BEST1-208ENST00000534553 IGHA1P01876 353 aa12.27□□□□□ -0.45
BEST1-208ENST00000534553 INHBBP09529 407 aa12.27□□□□□ -0.45
BEST1-208ENST00000534553 PRR23D2P0DMB1 279 aaPredicted RBP12.27□□□□□ -0.45
BEST1-208ENST00000534553 PGCP20142 388 aa12.27□□□□□ -0.45
BEST1-208ENST00000534553 ATP6V1E1P36543 226 aa12.27□□□□□ -0.45
BEST1-208ENST00000534553 LIMK1P53667 647 aa12.27□□□□□ -0.45
BEST1-208ENST00000534553 LSM3P62310 102 aaKnown RBP12.27□□□□□ -0.45
BEST1-208ENST00000534553 ZFP36L1Q07352 338 aaKnown RBP12.27□□□□□ -0.45
BEST1-208ENST00000534553 NIPAL3Q6P499 406 aa12.27□□□□□ -0.45
BEST1-208ENST00000534553 LANCL3Q6ZV70 420 aa12.27□□□□□ -0.45
BEST1-208ENST00000534553 MEPCEQ7L2J0 689 aaKnown RBP12.27□□□□□ -0.45
BEST1-208ENST00000534553 ATCAYQ86WG3 371 aa12.27□□□□□ -0.45
BEST1-208ENST00000534553 CPOQ8IVL8 374 aa12.27□□□□□ -0.45
BEST1-208ENST00000534553 SLC38A9Q8NBW4 561 aa12.27□□□□□ -0.45
BEST1-208ENST00000534553 GTPBP2Q9BX10 602 aaKnown RBP12.27□□□□□ -0.45
BEST1-208ENST00000534553 WDR12Q9GZL7 423 aaKnown RBP12.27□□□□□ -0.45
BEST1-208ENST00000534553 HINT3Q9NQE9 182 aaKnown RBP12.27□□□□□ -0.45
BEST1-208ENST00000534553 RYDENQ9NUL5 291 aaKnown RBP12.27□□□□□ -0.45
BEST1-208ENST00000534553 CCDC59Q9P031 241 aaKnown RBP12.27□□□□□ -0.45
BEST1-208ENST00000534553 CARD8Q9Y2G2 431 aa12.27□□□□□ -0.45
BEST1-208ENST00000534553 TECTAO75443 2155 aa12.27□□□□□ -0.45
BEST1-208ENST00000534553 SDK1Q7Z5N4 2213 aa12.26□□□□□ -0.45
BEST1-208ENST00000534553 TRAV27A0A087WT01 109 aa12.26□□□□□ -0.45
BEST1-208ENST00000534553 MEN1O00255 615 aa12.26□□□□□ -0.45
BEST1-208ENST00000534553 OR7A10O76100 309 aa12.26□□□□□ -0.45
BEST1-208ENST00000534553 TIAF1O95411 115 aa12.26□□□□□ -0.45
BEST1-208ENST00000534553 NADKO95544 446 aaPredicted RBP12.26□□□□□ -0.45
BEST1-208ENST00000534553 ATXN8OSP0DMR3 200 aa12.26□□□□□ -0.45
BEST1-208ENST00000534553 CPEP16870 476 aa12.26□□□□□ -0.45
BEST1-208ENST00000534553 NOS3P29474 1203 aa12.26□□□□□ -0.45
BEST1-208ENST00000534553 CCR4P51679 360 aa12.26□□□□□ -0.45
BEST1-208ENST00000534553 SLC26A5P58743 744 aa12.26□□□□□ -0.45
BEST1-208ENST00000534553 ACSM1Q08AH1 577 aa12.26□□□□□ -0.45
BEST1-208ENST00000534553 POU4F2Q12837 409 aa12.26□□□□□ -0.45
BEST1-208ENST00000534553 DPY19L2P2Q6ZN68 376 aa12.26□□□□□ -0.45
BEST1-208ENST00000534553 NFAM1Q8NET5 270 aaPredicted RBP12.26□□□□□ -0.45
BEST1-208ENST00000534553 OR52N1Q8NH53 320 aa12.26□□□□□ -0.45
BEST1-208ENST00000534553 OR51A7Q8NH64 312 aa12.26□□□□□ -0.45
BEST1-208ENST00000534553 ZNF563Q8TA94 476 aa12.26□□□□□ -0.45
BEST1-208ENST00000534553 RPL3LQ92901 407 aaKnown RBP12.26□□□□□ -0.45
BEST1-208ENST00000534553 MMP27Q9H306 513 aa12.26□□□□□ -0.45
BEST1-208ENST00000534553 FBXO8Q9NRD0 319 aa12.26□□□□□ -0.45
BEST1-208ENST00000534553 HAO2Q9NYQ3 351 aa12.26□□□□□ -0.45
BEST1-208ENST00000534553 AKAP7Q9P0M2 348 aaPredicted RBP12.26□□□□□ -0.45
BEST1-208ENST00000534553 TNFRSF10DQ9UBN6 386 aa12.26□□□□□ -0.45
BEST1-208ENST00000534553 IL20RAQ9UHF4 553 aa12.26□□□□□ -0.45
BEST1-208ENST00000534553 CLEC2DQ9UHP7 191 aa12.26□□□□□ -0.45
BEST1-208ENST00000534553 ARPC3O15145 178 aa12.25□□□□□ -0.45
BEST1-208ENST00000534553 FLRT2O43155 660 aa12.25□□□□□ -0.45
BEST1-208ENST00000534553 HCRTR2O43614 444 aa12.25□□□□□ -0.45
BEST1-208ENST00000534553 AKAP8O43823 692 aaKnown RBP12.25□□□□□ -0.45
BEST1-208ENST00000534553 KLK3P07288 261 aaPredicted RBP12.25□□□□□ -0.45
BEST1-208ENST00000534553 ADRA2AP08913 450 aa12.25□□□□□ -0.45
BEST1-208ENST00000534553 CD63P08962 238 aa12.25□□□□□ -0.45
BEST1-208ENST00000534553 SP9P0CG40 484 aa12.25□□□□□ -0.45
BEST1-208ENST00000534553 APEHP13798 732 aaKnown RBP12.25□□□□□ -0.45
BEST1-208ENST00000534553 ACP1P24666 158 aa12.25□□□□□ -0.45
BEST1-208ENST00000534553 SOX6P35712 828 aa12.25□□□□□ -0.45
BEST1-208ENST00000534553 MPLP40238 635 aa12.25□□□□□ -0.45
BEST1-208ENST00000534553 TMED10P49755 219 aaKnown RBP12.25□□□□□ -0.45
BEST1-208ENST00000534553 MLLT10P55197 1068 aa12.25□□□□□ -0.45
BEST1-208ENST00000534553 RPS4XP62701 263 aaKnown RBP12.25□□□□□ -0.45
BEST1-208ENST00000534553 BDH1Q02338 343 aa12.25□□□□□ -0.45
BEST1-208ENST00000534553 CBFBQ13951 182 aa12.25□□□□□ -0.45
BEST1-208ENST00000534553 NDUFAF6Q330K2 333 aa12.25□□□□□ -0.45
BEST1-208ENST00000534553 MRPL14Q6P1L8 145 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms