RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 TMIGD1Q6UXZ0 262 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 Q6ZSR9 355 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 NUP54Q7Z3B4 507 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 CCDC25Q86WR0 208 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 PLCZ1Q86YW0 608 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 MED12LQ86YW9 2145 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 VSTM4Q8IW00 320 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 CTAGE4Q8IX94 777 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 TUSC5Q8IXB3 177 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 GABRG1Q8N1C3 465 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 FBXL14Q8N1E6 418 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 SLC35F6Q8N357 371 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 TBC1D19Q8N5T2 526 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 OR2C3Q8N628 320 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 PNLDC1Q8NA58 520 aaKnown RBP2.58□□□□□ -2
CHMP4A-208ENST00000534106 STEAP2Q8NFT2 490 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 OR2L5Q8NG80 312 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 OR4N2Q8NGD1 307 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 OR52N5Q8NH56 324 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 ADAMTS15Q8TE58 950 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 ZNF418Q8TF45 676 aaPredicted RBP2.58□□□□□ -2
CHMP4A-208ENST00000534106 KCTD4Q8WVF5 259 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 C1orf54Q8WWF1 131 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 RFKQ969G6 155 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 TMBIM1Q969X1 311 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 FBXL8Q96CD0 374 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 LRRC45Q96CN5 670 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 OMA1Q96E52 524 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 FBXO17Q96EF6 278 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 LINGO1Q96FE5 620 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 PANX2Q96RD6 677 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 DHRS9Q9BPW9 319 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 ARPC5LQ9BPX5 153 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 KLHDC3Q9BQ90 382 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 BPIFA3Q9BQP9 254 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 PIMREGQ9BSJ6 248 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 H2AFJQ9BTM1 129 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 KIFC1Q9BW19 673 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 RBM4Q9BWF3 364 aaKnown RBP2.58□□□□□ -2
CHMP4A-208ENST00000534106 C1orf43Q9BWL3 253 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 OSBPL11Q9BXB4 747 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 ITPAQ9BY32 194 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 TRIM54Q9BYV2 358 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 TSPYL1Q9H0U9 437 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 OR51B5Q9H339 312 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 CDC42EP4Q9H3Q1 356 aaKnown RBP2.58□□□□□ -2
CHMP4A-208ENST00000534106 RPF2Q9H7B2 306 aaKnown RBP2.58□□□□□ -2
CHMP4A-208ENST00000534106 TMEM185BQ9H7F4 350 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 ACTR8Q9H981 624 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 ANKRA2Q9H9E1 313 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 NHEJ1Q9H9Q4 299 aaPredicted RBP2.58□□□□□ -2
CHMP4A-208ENST00000534106 CXorf21Q9HAI6 301 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 PELI2Q9HAT8 420 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 LYRM4Q9HD34 91 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 ST6GALNAC1Q9NSC7 600 aaPredicted RBP2.58□□□□□ -2
CHMP4A-208ENST00000534106 SERTAD4Q9NUC0 356 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 ZNF446Q9NWS9 450 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 HIF1ANQ9NWT6 349 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 XPR1Q9UBH6 696 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 DKKL1Q9UK85 242 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 POU2F3Q9UKI9 436 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 SLC45A2Q9UMX9 530 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 MRPS33Q9Y291 106 aaKnown RBP2.58□□□□□ -2
CHMP4A-208ENST00000534106 PTGDR2Q9Y5Y4 395 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 STARD9Q9P2P6 4700 aa2.58□□□□□ -2
CHMP4A-208ENST00000534106 YLPM1P49750 1951 aaKnown RBP2.58□□□□□ -2
CHMP4A-208ENST00000534106 IGKV2D-30A0A075B6S6 120 aa2.57□□□□□ -2
CHMP4A-208ENST00000534106 A0A0J9YW62 118 aa2.57□□□□□ -2
CHMP4A-208ENST00000534106 ANKDD1BA6NHY2 528 aa2.57□□□□□ -2
CHMP4A-208ENST00000534106 NCF1BA6NI72 391 aaPredicted RBP2.57□□□□□ -2
CHMP4A-208ENST00000534106 NCF1CA8MVU1 366 aaPredicted RBP2.57□□□□□ -2
CHMP4A-208ENST00000534106 BTNL10A8MVZ5 291 aa2.57□□□□□ -2
CHMP4A-208ENST00000534106 ANKRD65E5RJM6 399 aa2.57□□□□□ -2
CHMP4A-208ENST00000534106 G3V4G9 280 aa2.57□□□□□ -2
CHMP4A-208ENST00000534106 H7C417 338 aa2.57□□□□□ -2
CHMP4A-208ENST00000534106 M0R1B8 84 aa2.57□□□□□ -2
CHMP4A-208ENST00000534106 TNFSF11O14788 317 aa2.57□□□□□ -2
CHMP4A-208ENST00000534106 CLGNO14967 610 aa2.57□□□□□ -2
CHMP4A-208ENST00000534106 TAPBPO15533 448 aa2.57□□□□□ -2
CHMP4A-208ENST00000534106 SCO2O43819 266 aa2.57□□□□□ -2
CHMP4A-208ENST00000534106 EFNA2O43921 213 aa2.57□□□□□ -2
CHMP4A-208ENST00000534106 SS18L1O75177 396 aaPredicted RBP2.57□□□□□ -2
CHMP4A-208ENST00000534106 INMTO95050 263 aa2.57□□□□□ -2
CHMP4A-208ENST00000534106 STAMBPO95630 424 aa2.57□□□□□ -2
CHMP4A-208ENST00000534106 IGHV3-9P01782 118 aa2.57□□□□□ -2
CHMP4A-208ENST00000534106 FESP07332 822 aa2.57□□□□□ -2
CHMP4A-208ENST00000534106 C8GP07360 202 aa2.57□□□□□ -2
CHMP4A-208ENST00000534106 PEPDP12955 493 aa2.57□□□□□ -2
CHMP4A-208ENST00000534106 ENO3P13929 434 aaPredicted RBP2.57□□□□□ -2
CHMP4A-208ENST00000534106 CPMP14384 443 aa2.57□□□□□ -2
CHMP4A-208ENST00000534106 NCF1P14598 390 aaPredicted RBP2.57□□□□□ -2
CHMP4A-208ENST00000534106 H2AFXP16104 143 aaPredicted RBP2.57□□□□□ -2
CHMP4A-208ENST00000534106 PGCP20142 388 aa2.57□□□□□ -2
CHMP4A-208ENST00000534106 NT5EP21589 574 aa2.57□□□□□ -2
CHMP4A-208ENST00000534106 HIST1H1TP22492 207 aaPredicted RBP2.57□□□□□ -2
CHMP4A-208ENST00000534106 TNFSF4P23510 183 aa2.57□□□□□ -2
CHMP4A-208ENST00000534106 SHC1P29353 583 aa2.57□□□□□ -2
CHMP4A-208ENST00000534106 PCGF2P35227 344 aa2.57□□□□□ -2
CHMP4A-208ENST00000534106 NPY2RP49146 381 aa2.57□□□□□ -2
CHMP4A-208ENST00000534106 PRIM2P49643 509 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms