RNA–Protein interactions for RNA: ENST00000534010.1

SDHD-208, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 2

Gene SDHD, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-208ENST00000534010 GTDC1Q4AE62 458 aa9.62□□□□□ -0.87
SDHD-208ENST00000534010 PDSS1Q5T2R2 415 aa9.62□□□□□ -0.87
SDHD-208ENST00000534010 ATAD3BQ5T9A4 648 aa9.62□□□□□ -0.87
SDHD-208ENST00000534010 PRAMEF8Q5VWM4 474 aa9.62□□□□□ -0.87
SDHD-208ENST00000534010 PRAMEF7Q5VXH5 474 aa9.62□□□□□ -0.87
SDHD-208ENST00000534010 BLOC1S3Q6QNY0 202 aa9.62□□□□□ -0.87
SDHD-208ENST00000534010 TMPPEQ6ZT21 453 aa9.62□□□□□ -0.87
SDHD-208ENST00000534010 FCRLAQ7L513 359 aa9.62□□□□□ -0.87
SDHD-208ENST00000534010 SLC43A2Q8N370 569 aa9.62□□□□□ -0.87
SDHD-208ENST00000534010 SLC25A43Q8WUT9 341 aaPredicted RBP9.62□□□□□ -0.87
SDHD-208ENST00000534010 ROBO4Q8WZ75 1007 aa9.62□□□□□ -0.87
SDHD-208ENST00000534010 CNOT9Q92600 299 aaKnown RBP9.62□□□□□ -0.87
SDHD-208ENST00000534010 CHMP6Q96FZ7 201 aa9.62□□□□□ -0.87
SDHD-208ENST00000534010 EBF4Q9BQW3 602 aa9.62□□□□□ -0.87
SDHD-208ENST00000534010 SLC39A3Q9BRY0 314 aa9.62□□□□□ -0.87
SDHD-208ENST00000534010 CCDC28BQ9BUN5 200 aa9.62□□□□□ -0.87
SDHD-208ENST00000534010 QRSL1Q9H0R6 528 aaKnown RBP9.62□□□□□ -0.87
SDHD-208ENST00000534010 MTHFD2LQ9H903 347 aaPredicted RBP9.62□□□□□ -0.87
SDHD-208ENST00000534010 TPT1P8Q9HAU6 139 aa9.62□□□□□ -0.87
SDHD-208ENST00000534010 SLC25A37Q9NYZ2 338 aa9.62□□□□□ -0.87
SDHD-208ENST00000534010 NDRG3Q9UGV2 375 aa9.62□□□□□ -0.87
SDHD-208ENST00000534010 CLEC4AQ9UMR7 237 aa9.62□□□□□ -0.87
SDHD-208ENST00000534010 EMC9Q9Y3B6 208 aa9.62□□□□□ -0.87
SDHD-208ENST00000534010 USF3Q68DE3 2245 aa9.62□□□□□ -0.87
SDHD-208ENST00000534010 A0A1W2PNR3 127 aa9.61□□□□□ -0.87
SDHD-208ENST00000534010 RFXANKO14593 260 aa9.61□□□□□ -0.87
SDHD-208ENST00000534010 SMNDC1O75940 238 aaKnown RBP eCLIP9.61□□□□□ -0.87
SDHD-208ENST00000534010 SASH3O75995 380 aa9.61□□□□□ -0.87
SDHD-208ENST00000534010 SYNGR4O95473 234 aa9.61□□□□□ -0.87
SDHD-208ENST00000534010 KRT75O95678 551 aa9.61□□□□□ -0.87
SDHD-208ENST00000534010 PMS2P2O95744 297 aa9.61□□□□□ -0.87
SDHD-208ENST00000534010 RAF1P04049 648 aa9.61□□□□□ -0.87
SDHD-208ENST00000534010 GSNP06396 782 aa9.61□□□□□ -0.87
SDHD-208ENST00000534010 YES1P07947 543 aa9.61□□□□□ -0.87
SDHD-208ENST00000534010 UBTFL6P0CB48 400 aaPredicted RBP9.61□□□□□ -0.87
SDHD-208ENST00000534010 COX5AP20674 150 aa9.61□□□□□ -0.87
SDHD-208ENST00000534010 EDNRAP25101 427 aa9.61□□□□□ -0.87
SDHD-208ENST00000534010 FKBP2P26885 142 aaKnown RBP9.61□□□□□ -0.87
SDHD-208ENST00000534010 HOXC12P31275 282 aa9.61□□□□□ -0.87
SDHD-208ENST00000534010 NTF4P34130 210 aa9.61□□□□□ -0.87
SDHD-208ENST00000534010 CPOXP36551 454 aa9.61□□□□□ -0.87
SDHD-208ENST00000534010 IDH3AP50213 366 aa9.61□□□□□ -0.87
SDHD-208ENST00000534010 ATP4BP51164 291 aa9.61□□□□□ -0.87
SDHD-208ENST00000534010 POLR2JP52435 117 aaKnown RBP9.61□□□□□ -0.87
SDHD-208ENST00000534010 MAP2K6P52564 334 aa9.61□□□□□ -0.87
SDHD-208ENST00000534010 ART1P52961 327 aa9.61□□□□□ -0.87
SDHD-208ENST00000534010 EPS8Q12929 822 aa9.61□□□□□ -0.87
SDHD-208ENST00000534010 SYT14P1Q58G82 188 aa9.61□□□□□ -0.87
SDHD-208ENST00000534010 RNF220Q5VTB9 566 aa9.61□□□□□ -0.87
SDHD-208ENST00000534010 GTF2IRD2BQ6EKJ0 949 aa9.61□□□□□ -0.87
SDHD-208ENST00000534010 ZNF621Q6ZSS3 439 aa9.61□□□□□ -0.87
SDHD-208ENST00000534010 BEND4Q6ZU67 534 aa9.61□□□□□ -0.87
SDHD-208ENST00000534010 NUFIP2Q7Z417 695 aaKnown RBP9.61□□□□□ -0.87
SDHD-208ENST00000534010 GRINAQ7Z429 371 aa9.61□□□□□ -0.87
SDHD-208ENST00000534010 GTF2IRD2Q86UP8 949 aa9.61□□□□□ -0.87
SDHD-208ENST00000534010 TUSC5Q8IXB3 177 aa9.61□□□□□ -0.87
SDHD-208ENST00000534010 C10orf111Q8N326 155 aa9.61□□□□□ -0.87
SDHD-208ENST00000534010 SLC38A5Q8WUX1 472 aa9.61□□□□□ -0.87
SDHD-208ENST00000534010 TMEM234Q8WY98 164 aa9.61□□□□□ -0.87
SDHD-208ENST00000534010 SLC35B4Q969S0 331 aa9.61□□□□□ -0.87
SDHD-208ENST00000534010 ARL5BQ96KC2 179 aa9.61□□□□□ -0.87
SDHD-208ENST00000534010 HS3ST6Q96QI5 342 aa9.61□□□□□ -0.87
SDHD-208ENST00000534010 PIP5K1AQ99755 562 aa9.61□□□□□ -0.87
SDHD-208ENST00000534010 TACO1Q9BSH4 297 aaKnown RBP9.61□□□□□ -0.87
SDHD-208ENST00000534010 BCL2L10Q9HD36 194 aa9.61□□□□□ -0.87
SDHD-208ENST00000534010 TIGARQ9NQ88 270 aa9.61□□□□□ -0.87
SDHD-208ENST00000534010 CTPS2Q9NRF8 586 aa9.61□□□□□ -0.87
SDHD-208ENST00000534010 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.61□□□□□ -0.87
SDHD-208ENST00000534010 KLHL28Q9NXS3 571 aa9.61□□□□□ -0.87
SDHD-208ENST00000534010 TRAPPC4Q9Y296 219 aa9.61□□□□□ -0.87
SDHD-208ENST00000534010 GPR52Q9Y2T5 361 aa9.61□□□□□ -0.87
SDHD-208ENST00000534010 PCDHB14Q9Y5E9 798 aa9.61□□□□□ -0.87
SDHD-208ENST00000534010 ALPK2Q86TB3 2170 aa9.61□□□□□ -0.87
SDHD-208ENST00000534010 A0A096LPI6 279 aa9.6□□□□□ -0.87
SDHD-208ENST00000534010 HMGB1P1B2RPK0 211 aaPredicted RBP9.6□□□□□ -0.87
SDHD-208ENST00000534010 PDLIM1O00151 329 aa9.6□□□□□ -0.87
SDHD-208ENST00000534010 AP3D1O14617 1153 aa9.6□□□□□ -0.87
SDHD-208ENST00000534010 ZNF208O43345 1280 aa9.6□□□□□ -0.87
SDHD-208ENST00000534010 NPIPB7O75200 414 aa9.6□□□□□ -0.87
SDHD-208ENST00000534010 PRKD3O94806 890 aa9.6□□□□□ -0.87
SDHD-208ENST00000534010 CNOT4O95628 575 aaKnown RBP9.6□□□□□ -0.87
SDHD-208ENST00000534010 THBS1P07996 1170 aa9.6□□□□□ -0.87
SDHD-208ENST00000534010 ETFAP13804 333 aa9.6□□□□□ -0.87
SDHD-208ENST00000534010 PAX1P15863 534 aa9.6□□□□□ -0.87
SDHD-208ENST00000534010 CHI3L1P36222 383 aaPredicted RBP9.6□□□□□ -0.87
SDHD-208ENST00000534010 OR3A2P47893 321 aa9.6□□□□□ -0.87
SDHD-208ENST00000534010 DIO1P49895 249 aa9.6□□□□□ -0.87
SDHD-208ENST00000534010 DEFB113Q30KQ7 82 aa9.6□□□□□ -0.87
SDHD-208ENST00000534010 MRPL2Q5T653 305 aaKnown RBP9.6□□□□□ -0.87
SDHD-208ENST00000534010 ZNF550Q7Z398 422 aa9.6□□□□□ -0.87
SDHD-208ENST00000534010 TGIF2LYQ8IUE0 185 aa9.6□□□□□ -0.87
SDHD-208ENST00000534010 MIER2Q8N344 545 aa9.6□□□□□ -0.87
SDHD-208ENST00000534010 ZNF614Q8N883 585 aa9.6□□□□□ -0.87
SDHD-208ENST00000534010 CKAP2Q8WWK9 683 aa9.6□□□□□ -0.87
SDHD-208ENST00000534010 AURKBQ96GD4 344 aaPredicted RBP9.6□□□□□ -0.87
SDHD-208ENST00000534010 ZBTB18Q99592 522 aa9.6□□□□□ -0.87
SDHD-208ENST00000534010 TCF7L2Q9NQB0 619 aa9.6□□□□□ -0.87
SDHD-208ENST00000534010 CHRNA9Q9UGM1 479 aa9.6□□□□□ -0.87
SDHD-208ENST00000534010 OSGIN1Q9UJX0 560 aa9.6□□□□□ -0.87
SDHD-208ENST00000534010 PLEKHA6Q9Y2H5 1048 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms