RNA–Protein interactions for RNA: ENST00000533845.1

PDE4DIP-233, Transcript of phosphodiesterase 4D interacting protein, human

TSL 5

Gene PDE4DIP, Length 376 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDE4DIP-233	ENST00000533845	SIRPA	P78324	504 aa		10.19	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	MERTK	Q12866	999 aa		10.19	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	EPS8	Q12929	822 aa		10.19	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	SYT14P1	Q58G82	188 aa		10.19	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	MRPL2	Q5T653	305 aa	Known RBP	10.19	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	RNF220	Q5VTB9	566 aa		10.19	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	TMPPE	Q6ZT21	453 aa		10.19	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	ZNF440	Q8IYI8	595 aa		10.19	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	SLC43A2	Q8N370	569 aa		10.19	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	DPP10	Q8N608	796 aa		10.19	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	OR52P1P	Q8NH57	321 aa		10.19	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	ROBO4	Q8WZ75	1007 aa		10.19	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	THOC1	Q96FV9	657 aa	Known RBP	10.19	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	TMEM19	Q96HH6	336 aa		10.19	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	ADAM19	Q9H013	955 aa		10.19	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	CCDC134	Q9H6E4	229 aa		10.19	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	NPHS2	Q9NP85	383 aa		10.19	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	CTPS2	Q9NRF8	586 aa		10.19	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	CHRNA9	Q9UGM1	479 aa		10.19	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	DCTN4	Q9UJW0	460 aa		10.19	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	ING1	Q9UK53	422 aa	Predicted RBP	10.19	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	PROCR	Q9UNN8	238 aa		10.19	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	CHST2	Q9Y4C5	530 aa		10.19	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	ABCA12	Q86UK0	2595 aa		10.19	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	LRBA	P50851	2863 aa		10.18	□□□□□ -0.78
PDE4DIP-233	ENST00000533845		A0A1W2PNR3	127 aa		10.18	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	CFAP73	A6NFT4	308 aa		10.18	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	ENO4	A6NNW6	628 aa		10.18	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	AP3D1	O14617	1153 aa		10.18	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	ZNF208	O43345	1280 aa		10.18	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	CYTIP	O60759	359 aa		10.18	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	PRKD3	O94806	890 aa		10.18	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	PGM3	O95394	542 aa		10.18	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	PLG	P00747	810 aa	Predicted RBP	10.18	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	ARAF	P10398	606 aa		10.18	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	ETS2	P15036	469 aa		10.18	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	NCF2	P19878	526 aa	Predicted RBP	10.18	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	ENPP1	P22413	925 aa		10.18	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	AGTR1	P30556	359 aa		10.18	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	SLC7A1	P30825	629 aa		10.18	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	UGT2B10	P36537	528 aa		10.18	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	ACAA2	P42765	397 aa	Known RBP	10.18	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	SLC1A3	P43003	542 aa		10.18	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	CTBP2	P56545	445 aa		10.18	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	LARS2	Q15031	903 aa	Known RBP	10.18	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	LIN52	Q52LA3	116 aa		10.18	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	RUNDC3A	Q59EK9	446 aa		10.18	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	ZNF836	Q6ZNA1	936 aa		10.18	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	FCRLA	Q7L513	359 aa		10.18	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	VRK2	Q86Y07	508 aa		10.18	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	C10orf111	Q8N326	155 aa		10.18	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	CLIP4	Q8N3C7	705 aa		10.18	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	ATP6V1C2	Q8NEY4	427 aa		10.18	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	ZNF563	Q8TA94	476 aa		10.18	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	ABHD3	Q8WU67	409 aa		10.18	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	SLC35B4	Q969S0	331 aa		10.18	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	REXO5	Q96IC2	774 aa	Known RBP	10.18	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	GPATCH1	Q9BRR8	931 aa	Known RBP	10.18	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	SPATA9	Q9BWV2	254 aa		10.18	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	RSPO3	Q9BXY4	272 aa	Predicted RBP	10.18	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	TMEM38A	Q9H6F2	299 aa		10.18	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	BCO1	Q9HAY6	547 aa		10.18	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	MED4	Q9NPJ6	270 aa		10.18	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	RLIM	Q9NVW2	624 aa		10.18	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	KLHL13	Q9P2N7	655 aa		10.18	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	NDRG3	Q9UGV2	375 aa		10.18	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	LEF1	Q9UJU2	399 aa	Predicted RBP	10.18	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	CLEC4A	Q9UMR7	237 aa		10.18	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	ZNF232	Q9UNY5	417 aa		10.18	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	ZNF443	Q9Y2A4	671 aa	Predicted RBP	10.18	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	IFT52	Q9Y366	437 aa		10.18	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	HDGFL3	Q9Y3E1	203 aa		10.18	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	TESMIN	Q9Y4I5	508 aa		10.18	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	SPIN1	Q9Y657	262 aa	Predicted RBP	10.18	□□□□□ -0.78
PDE4DIP-233	ENST00000533845		A0A0G2JND7	137 aa		10.17	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	SH3D21	A4FU49	640 aa		10.17	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	TMEM247	A6NEH6	219 aa		10.17	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	C16orf97	H3BN30	126 aa		10.17	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	SMAD9	O15198	467 aa	Known RBP	10.17	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	ATP8B1	O43520	1251 aa		10.17	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	DNPH1	O43598	174 aa		10.17	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	PMS2P2	O95744	297 aa		10.17	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	YES1	P07947	543 aa		10.17	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	POU2F1	P14859	743 aa		10.17	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	CCKAR	P32238	428 aa		10.17	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	CPOX	P36551	454 aa		10.17	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	DIO1	P49895	249 aa		10.17	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	POLR2H	P52434	150 aa	Known RBP	10.17	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	CSNK2A1	P68400	391 aa	Predicted RBP	10.17	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	PDK3	Q15120	406 aa		10.17	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	ADRM1	Q16186	407 aa		10.17	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	10.17	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	CGB2	Q6NT52	195 aa		10.17	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	BEND4	Q6ZU67	534 aa		10.17	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	MTDH	Q86UE4	582 aa	Known RBP	10.17	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	RETREG3	Q86VR2	466 aa		10.17	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	TMEM200A	Q86VY9	491 aa		10.17	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	LURAP1L	Q8IV03	231 aa		10.17	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	TUSC5	Q8IXB3	177 aa		10.17	□□□□□ -0.78
PDE4DIP-233	ENST00000533845	BBS10	Q8TAM1	723 aa		10.17	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 169.3 ms