RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 IL6P05231 212 aa9.29□□□□□ -0.92
CAPN1-225ENST00000533704 THBDP07204 575 aa9.29□□□□□ -0.92
CAPN1-225ENST00000533704 FESP07332 822 aa9.29□□□□□ -0.92
CAPN1-225ENST00000533704 YES1P07947 543 aa9.29□□□□□ -0.92
CAPN1-225ENST00000533704 PPP3CBP16298 524 aa9.29□□□□□ -0.92
CAPN1-225ENST00000533704 IL7RP16871 459 aa9.29□□□□□ -0.92
CAPN1-225ENST00000533704 CD53P19397 219 aa9.29□□□□□ -0.92
CAPN1-225ENST00000533704 IL32P24001 234 aa9.29□□□□□ -0.92
CAPN1-225ENST00000533704 CRATP43155 626 aa9.29□□□□□ -0.92
CAPN1-225ENST00000533704 IDH2P48735 452 aaKnown RBP9.29□□□□□ -0.92
CAPN1-225ENST00000533704 DIO1P49895 249 aa9.29□□□□□ -0.92
CAPN1-225ENST00000533704 POLR2JP52435 117 aaKnown RBP9.29□□□□□ -0.92
CAPN1-225ENST00000533704 RAC3P60763 192 aa9.29□□□□□ -0.92
CAPN1-225ENST00000533704 LRRC74AQ0VAA2 488 aa9.29□□□□□ -0.92
CAPN1-225ENST00000533704 RASGEF1BQ0VAM2 473 aa9.29□□□□□ -0.92
CAPN1-225ENST00000533704 FOXD4Q12950 439 aaPredicted RBP9.29□□□□□ -0.92
CAPN1-225ENST00000533704 GNA13Q14344 377 aa9.29□□□□□ -0.92
CAPN1-225ENST00000533704 GSTA3Q16772 222 aa9.29□□□□□ -0.92
CAPN1-225ENST00000533704 GTDC1Q4AE62 458 aa9.29□□□□□ -0.92
CAPN1-225ENST00000533704 SYT14P1Q58G82 188 aa9.29□□□□□ -0.92
CAPN1-225ENST00000533704 TFAP2EQ6VUC0 442 aa9.29□□□□□ -0.92
CAPN1-225ENST00000533704 LRRC74BQ6ZQY2 392 aa9.29□□□□□ -0.92
CAPN1-225ENST00000533704 MIER2Q8N344 545 aa9.29□□□□□ -0.92
CAPN1-225ENST00000533704 SLC43A2Q8N370 569 aa9.29□□□□□ -0.92
CAPN1-225ENST00000533704 FAM71CQ8NEG0 241 aa9.29□□□□□ -0.92
CAPN1-225ENST00000533704 LRRC8CQ8TDW0 803 aa9.29□□□□□ -0.92
CAPN1-225ENST00000533704 DYDC1Q8WWB3 177 aa9.29□□□□□ -0.92
CAPN1-225ENST00000533704 VPS33AQ96AX1 596 aa9.29□□□□□ -0.92
CAPN1-225ENST00000533704 S100PBPQ96BU1 408 aa9.29□□□□□ -0.92
CAPN1-225ENST00000533704 ITCHQ96J02 903 aa9.29□□□□□ -0.92
CAPN1-225ENST00000533704 MAELQ96JY0 434 aaKnown RBP9.29□□□□□ -0.92
CAPN1-225ENST00000533704 TRNT1Q96Q11 434 aaKnown RBP9.29□□□□□ -0.92
CAPN1-225ENST00000533704 ZNF300Q96RE9 604 aaPredicted RBP9.29□□□□□ -0.92
CAPN1-225ENST00000533704 OR11A1Q9GZK7 315 aa9.29□□□□□ -0.92
CAPN1-225ENST00000533704 SAP130Q9H0E3 1048 aa9.29□□□□□ -0.92
CAPN1-225ENST00000533704 SLC38A1Q9H2H9 487 aa9.29□□□□□ -0.92
CAPN1-225ENST00000533704 RMND5AQ9H871 391 aa9.29□□□□□ -0.92
CAPN1-225ENST00000533704 ZIM2Q9NZV7 527 aa9.29□□□□□ -0.92
CAPN1-225ENST00000533704 SPIN1Q9Y657 262 aaPredicted RBP9.29□□□□□ -0.92
CAPN1-225ENST00000533704 USH1CQ9Y6N9 552 aa9.29□□□□□ -0.92
CAPN1-225ENST00000533704 USF3Q68DE3 2245 aa9.29□□□□□ -0.92
CAPN1-225ENST00000533704 AGAP5A6NIR3 686 aa9.28□□□□□ -0.92
CAPN1-225ENST00000533704 ETV2O00321 342 aaPredicted RBP9.28□□□□□ -0.92
CAPN1-225ENST00000533704 KLF11O14901 512 aa9.28□□□□□ -0.92
CAPN1-225ENST00000533704 POLR3GO15318 223 aaPredicted RBP9.28□□□□□ -0.92
CAPN1-225ENST00000533704 DNAJA2O60884 412 aa9.28□□□□□ -0.92
CAPN1-225ENST00000533704 ADAP00813 363 aa9.28□□□□□ -0.92
CAPN1-225ENST00000533704 DBIP07108 87 aaKnown RBP9.28□□□□□ -0.92
CAPN1-225ENST00000533704 GUSBP08236 651 aa9.28□□□□□ -0.92
CAPN1-225ENST00000533704 ETFAP13804 333 aa9.28□□□□□ -0.92
CAPN1-225ENST00000533704 APOBEC1P41238 236 aaKnown RBP9.28□□□□□ -0.92
CAPN1-225ENST00000533704 RIPPLY3P57055 190 aa9.28□□□□□ -0.92
CAPN1-225ENST00000533704 OR2B6P58173 313 aa9.28□□□□□ -0.92
CAPN1-225ENST00000533704 STX1BP61266 288 aa9.28□□□□□ -0.92
CAPN1-225ENST00000533704 CSNK2A1P68400 391 aaPredicted RBP9.28□□□□□ -0.92
CAPN1-225ENST00000533704 ADAM8P78325 824 aa9.28□□□□□ -0.92
CAPN1-225ENST00000533704 CAPRIN1Q14444 709 aaKnown RBP9.28□□□□□ -0.92
CAPN1-225ENST00000533704 ACKR1Q16570 336 aa9.28□□□□□ -0.92
CAPN1-225ENST00000533704 BEX5Q5H9J7 111 aa9.28□□□□□ -0.92
CAPN1-225ENST00000533704 TMPPEQ6ZT21 453 aa9.28□□□□□ -0.92
CAPN1-225ENST00000533704 GRINAQ7Z429 371 aa9.28□□□□□ -0.92
CAPN1-225ENST00000533704 PEX5LQ8IYB4 626 aa9.28□□□□□ -0.92
CAPN1-225ENST00000533704 ZNF100Q8IYN0 542 aa9.28□□□□□ -0.92
CAPN1-225ENST00000533704 WFDC11Q8NEX6 87 aa9.28□□□□□ -0.92
CAPN1-225ENST00000533704 STEAP2Q8NFT2 490 aa9.28□□□□□ -0.92
CAPN1-225ENST00000533704 SLC25A43Q8WUT9 341 aaPredicted RBP9.28□□□□□ -0.92
CAPN1-225ENST00000533704 OIT3Q8WWZ8 545 aa9.28□□□□□ -0.92
CAPN1-225ENST00000533704 ZHX1-C8orf76Q96EF9 292 aa9.28□□□□□ -0.92
CAPN1-225ENST00000533704 AURKBQ96GD4 344 aaPredicted RBP9.28□□□□□ -0.92
CAPN1-225ENST00000533704 PLPPR2Q96GM1 343 aa9.28□□□□□ -0.92
CAPN1-225ENST00000533704 CCL19Q99731 98 aa9.28□□□□□ -0.92
CAPN1-225ENST00000533704 PSD2Q9BQI7 771 aa9.28□□□□□ -0.92
CAPN1-225ENST00000533704 TACO1Q9BSH4 297 aaKnown RBP9.28□□□□□ -0.92
CAPN1-225ENST00000533704 TMUB1Q9BVT8 246 aa9.28□□□□□ -0.92
CAPN1-225ENST00000533704 MTHFD2LQ9H903 347 aaPredicted RBP9.28□□□□□ -0.92
CAPN1-225ENST00000533704 CACYBPQ9HB71 228 aaKnown RBP9.28□□□□□ -0.92
CAPN1-225ENST00000533704 SLCO1B3Q9NPD5 702 aa9.28□□□□□ -0.92
CAPN1-225ENST00000533704 SDR39U1Q9NRG7 319 aaPredicted RBP9.28□□□□□ -0.92
CAPN1-225ENST00000533704 BEX4Q9NWD9 120 aaPredicted RBP9.28□□□□□ -0.92
CAPN1-225ENST00000533704 P2RX2Q9UBL9 471 aa9.28□□□□□ -0.92
CAPN1-225ENST00000533704 CHRNA9Q9UGM1 479 aa9.28□□□□□ -0.92
CAPN1-225ENST00000533704 PRSS50Q9UI38 385 aa9.28□□□□□ -0.92
CAPN1-225ENST00000533704 GPR52Q9Y2T5 361 aa9.28□□□□□ -0.92
CAPN1-225ENST00000533704 TMED7-TICAM2A0A0A6YYA0 188 aa9.27□□□□□ -0.93
CAPN1-225ENST00000533704 TMEM247A6NEH6 219 aa9.27□□□□□ -0.93
CAPN1-225ENST00000533704 DYNC1I1O14576 645 aa9.27□□□□□ -0.93
CAPN1-225ENST00000533704 KLF4O43474 513 aa9.27□□□□□ -0.93
CAPN1-225ENST00000533704 CYTIPO60759 359 aa9.27□□□□□ -0.93
CAPN1-225ENST00000533704 SMPD2O60906 423 aa9.27□□□□□ -0.93
CAPN1-225ENST00000533704 ADAM11O75078 769 aa9.27□□□□□ -0.93
CAPN1-225ENST00000533704 PLAUP00749 431 aa9.27□□□□□ -0.93
CAPN1-225ENST00000533704 BCHEP06276 602 aa9.27□□□□□ -0.93
CAPN1-225ENST00000533704 GKN3PP0CG01 181 aa9.27□□□□□ -0.93
CAPN1-225ENST00000533704 NID1P14543 1247 aa9.27□□□□□ -0.93
CAPN1-225ENST00000533704 PSMB1P20618 241 aaKnown RBP9.27□□□□□ -0.93
CAPN1-225ENST00000533704 FPR1P21462 350 aa9.27□□□□□ -0.93
CAPN1-225ENST00000533704 DSTNP60981 165 aa9.27□□□□□ -0.93
CAPN1-225ENST00000533704 NKX6-1P78426 367 aaPredicted RBP9.27□□□□□ -0.93
CAPN1-225ENST00000533704 TXNL4AP83876 142 aaKnown RBP9.27□□□□□ -0.93
CAPN1-225ENST00000533704 PLAURQ03405 335 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms