RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 RYDENQ9NUL5 291 aaKnown RBP10.2□□□□□ -0.78
TRAPPC4-213ENST00000533149 DCAF13Q9NV06 445 aaKnown RBP10.2□□□□□ -0.78
TRAPPC4-213ENST00000533149 GIN1Q9NXP7 522 aa10.2□□□□□ -0.78
TRAPPC4-213ENST00000533149 P2RX2Q9UBL9 471 aa10.2□□□□□ -0.78
TRAPPC4-213ENST00000533149 LIPT1Q9Y234 373 aa10.2□□□□□ -0.78
TRAPPC4-213ENST00000533149 ANGPT4Q9Y264 503 aa10.2□□□□□ -0.78
TRAPPC4-213ENST00000533149 KIAA1549Q9HCM3 1950 aa10.19□□□□□ -0.78
TRAPPC4-213ENST00000533149 GXYLT2A0PJZ3 443 aa10.19□□□□□ -0.78
TRAPPC4-213ENST00000533149 H0Y3Z8 333 aa10.19□□□□□ -0.78
TRAPPC4-213ENST00000533149 H3BNX3 289 aa10.19□□□□□ -0.78
TRAPPC4-213ENST00000533149 ZNF354AO60765 605 aaPredicted RBP10.19□□□□□ -0.78
TRAPPC4-213ENST00000533149 TRAPPC6AO75865 159 aa10.19□□□□□ -0.78
TRAPPC4-213ENST00000533149 NKX2-2O95096 273 aa10.19□□□□□ -0.78
TRAPPC4-213ENST00000533149 RCBTB2O95199 551 aa10.19□□□□□ -0.78
TRAPPC4-213ENST00000533149 PGM3O95394 542 aa10.19□□□□□ -0.78
TRAPPC4-213ENST00000533149 BAG2O95816 211 aa10.19□□□□□ -0.78
TRAPPC4-213ENST00000533149 BCHEP06276 602 aa10.19□□□□□ -0.78
TRAPPC4-213ENST00000533149 UMPSP11172 480 aa10.19□□□□□ -0.78
TRAPPC4-213ENST00000533149 CYP4B1P13584 511 aa10.19□□□□□ -0.78
TRAPPC4-213ENST00000533149 AQP1P29972 269 aa10.19□□□□□ -0.78
TRAPPC4-213ENST00000533149 SLC7A1P30825 629 aa10.19□□□□□ -0.78
TRAPPC4-213ENST00000533149 ZNF155Q12901 538 aaPredicted RBP10.19□□□□□ -0.78
TRAPPC4-213ENST00000533149 GNA13Q14344 377 aa10.19□□□□□ -0.78
TRAPPC4-213ENST00000533149 LRRC23Q53EV4 343 aaPredicted RBP10.19□□□□□ -0.78
TRAPPC4-213ENST00000533149 OLIG3Q7RTU3 272 aa10.19□□□□□ -0.78
TRAPPC4-213ENST00000533149 BTLAQ7Z6A9 289 aa10.19□□□□□ -0.78
TRAPPC4-213ENST00000533149 GALNT10Q86SR1 603 aa10.19□□□□□ -0.78
TRAPPC4-213ENST00000533149 SLC15A4Q8N697 577 aa10.19□□□□□ -0.78
TRAPPC4-213ENST00000533149 SLC2A12Q8TD20 617 aa10.19□□□□□ -0.78
TRAPPC4-213ENST00000533149 GPR151Q8TDV0 419 aa10.19□□□□□ -0.78
TRAPPC4-213ENST00000533149 ZNF721Q8TF20 911 aa10.19□□□□□ -0.78
TRAPPC4-213ENST00000533149 HOXB13Q92826 284 aaPredicted RBP10.19□□□□□ -0.78
TRAPPC4-213ENST00000533149 CDS1Q92903 461 aa10.19□□□□□ -0.78
TRAPPC4-213ENST00000533149 SLCO4A1Q96BD0 722 aa10.19□□□□□ -0.78
TRAPPC4-213ENST00000533149 SPACA9Q96E40 222 aaPredicted RBP10.19□□□□□ -0.78
TRAPPC4-213ENST00000533149 WDYHV1Q96HA8 205 aa10.19□□□□□ -0.78
TRAPPC4-213ENST00000533149 ART5Q96L15 291 aa10.19□□□□□ -0.78
TRAPPC4-213ENST00000533149 TRNT1Q96Q11 434 aaKnown RBP10.19□□□□□ -0.78
TRAPPC4-213ENST00000533149 STACQ99469 402 aa10.19□□□□□ -0.78
TRAPPC4-213ENST00000533149 LMF2Q9BU23 707 aaKnown RBP10.19□□□□□ -0.78
TRAPPC4-213ENST00000533149 DOHHQ9BU89 302 aa10.19□□□□□ -0.78
TRAPPC4-213ENST00000533149 EXD2Q9NVH0 621 aa10.19□□□□□ -0.78
TRAPPC4-213ENST00000533149 KLHL28Q9NXS3 571 aa10.19□□□□□ -0.78
TRAPPC4-213ENST00000533149 COPS7AQ9UBW8 275 aa10.19□□□□□ -0.78
TRAPPC4-213ENST00000533149 NKX1-2Q9UD57 310 aaPredicted RBP10.19□□□□□ -0.78
TRAPPC4-213ENST00000533149 PRODH2Q9UF12 536 aa10.19□□□□□ -0.78
TRAPPC4-213ENST00000533149 AP4S1Q9Y587 144 aa10.19□□□□□ -0.78
TRAPPC4-213ENST00000533149 A0A0G2JPF8 293 aa10.18□□□□□ -0.78
TRAPPC4-213ENST00000533149 DHRS12A0PJE2 317 aa10.18□□□□□ -0.78
TRAPPC4-213ENST00000533149 HNRNPCL2B2RXH8 293 aa10.18□□□□□ -0.78
TRAPPC4-213ENST00000533149 HNRNPCL3B7ZW38 293 aa10.18□□□□□ -0.78
TRAPPC4-213ENST00000533149 PRKD3O94806 890 aa10.18□□□□□ -0.78
TRAPPC4-213ENST00000533149 ZNF682O95780 498 aa10.18□□□□□ -0.78
TRAPPC4-213ENST00000533149 IFNA14P01570 189 aa10.18□□□□□ -0.78
TRAPPC4-213ENST00000533149 IGKV3-11P04433 115 aa10.18□□□□□ -0.78
TRAPPC4-213ENST00000533149 HPNP05981 417 aa10.18□□□□□ -0.78
TRAPPC4-213ENST00000533149 GPIP06744 558 aa10.18□□□□□ -0.78
TRAPPC4-213ENST00000533149 CHRM4P08173 479 aa10.18□□□□□ -0.78
TRAPPC4-213ENST00000533149 HNRNPCL4P0DMR1 293 aa10.18□□□□□ -0.78
TRAPPC4-213ENST00000533149 IDUAP35475 653 aa10.18□□□□□ -0.78
TRAPPC4-213ENST00000533149 SLC37A1P57057 533 aa10.18□□□□□ -0.78
TRAPPC4-213ENST00000533149 PCBP3P57721 371 aaKnown RBP10.18□□□□□ -0.78
TRAPPC4-213ENST00000533149 FUT5Q11128 374 aa10.18□□□□□ -0.78
TRAPPC4-213ENST00000533149 RCN1Q15293 331 aa10.18□□□□□ -0.78
TRAPPC4-213ENST00000533149 GPAT3Q53EU6 434 aa10.18□□□□□ -0.78
TRAPPC4-213ENST00000533149 CYBRD1Q53TN4 286 aa10.18□□□□□ -0.78
TRAPPC4-213ENST00000533149 RPS26P11Q5JNZ5 115 aaPredicted RBP10.18□□□□□ -0.78
TRAPPC4-213ENST00000533149 TBCELQ5QJ74 424 aa10.18□□□□□ -0.78
TRAPPC4-213ENST00000533149 ZFP1Q6P2D0 407 aa10.18□□□□□ -0.78
TRAPPC4-213ENST00000533149 RNF111Q6ZNA4 994 aa10.18□□□□□ -0.78
TRAPPC4-213ENST00000533149 CBLL1Q75N03 491 aa10.18□□□□□ -0.78
TRAPPC4-213ENST00000533149 EIF3MQ7L2H7 374 aaKnown RBP10.18□□□□□ -0.78
TRAPPC4-213ENST00000533149 C16orf62Q7Z3J2 963 aa10.18□□□□□ -0.78
TRAPPC4-213ENST00000533149 PATL1Q86TB9 770 aaKnown RBP10.18□□□□□ -0.78
TRAPPC4-213ENST00000533149 FAM86B1Q8N7N1 296 aa10.18□□□□□ -0.78
TRAPPC4-213ENST00000533149 NUBPLQ8TB37 319 aa10.18□□□□□ -0.78
TRAPPC4-213ENST00000533149 PIK3R3Q92569 461 aa10.18□□□□□ -0.78
TRAPPC4-213ENST00000533149 POP5Q969H6 163 aaKnown RBP10.18□□□□□ -0.78
TRAPPC4-213ENST00000533149 TAMM41Q96BW9 452 aa10.18□□□□□ -0.78
TRAPPC4-213ENST00000533149 PYURFQ96I23 114 aa10.18□□□□□ -0.78
TRAPPC4-213ENST00000533149 ZNF597Q96LX8 424 aa10.18□□□□□ -0.78
TRAPPC4-213ENST00000533149 VSTM2LQ96N03 204 aa10.18□□□□□ -0.78
TRAPPC4-213ENST00000533149 SEPHS2Q99611 448 aa10.18□□□□□ -0.78
TRAPPC4-213ENST00000533149 UGT2B28Q9BY64 529 aa10.18□□□□□ -0.78
TRAPPC4-213ENST00000533149 RNPEPL1Q9HAU8 725 aa10.18□□□□□ -0.78
TRAPPC4-213ENST00000533149 PROK2Q9HC23 129 aa10.18□□□□□ -0.78
TRAPPC4-213ENST00000533149 BCL2L10Q9HD36 194 aa10.18□□□□□ -0.78
TRAPPC4-213ENST00000533149 DUSP22Q9NRW4 184 aa10.18□□□□□ -0.78
TRAPPC4-213ENST00000533149 CALML5Q9NZT1 146 aa10.18□□□□□ -0.78
TRAPPC4-213ENST00000533149 RPS6KA6Q9UK32 745 aa10.18□□□□□ -0.78
TRAPPC4-213ENST00000533149 AURKCQ9UQB9 309 aa10.18□□□□□ -0.78
TRAPPC4-213ENST00000533149 CFL2Q9Y281 166 aa10.18□□□□□ -0.78
TRAPPC4-213ENST00000533149 DTX4Q9Y2E6 619 aa10.18□□□□□ -0.78
TRAPPC4-213ENST00000533149 GPR55Q9Y2T6 319 aaPredicted RBP10.18□□□□□ -0.78
TRAPPC4-213ENST00000533149 V9GYQ6 96 aa10.18□□□□□ -0.78
TRAPPC4-213ENST00000533149 RAI1Q7Z5J4 1906 aaPredicted RBP10.17□□□□□ -0.78
TRAPPC4-213ENST00000533149 TTC36A6NLP5 189 aa10.17□□□□□ -0.78
TRAPPC4-213ENST00000533149 MSTNO14793 375 aa10.17□□□□□ -0.78
TRAPPC4-213ENST00000533149 SNPHO15079 494 aa10.17□□□□□ -0.78
TRAPPC4-213ENST00000533149 SPRY1O43609 319 aaPredicted RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms