RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 RPS3AP61247 264 aaKnown RBP12.49□□□□□ -0.41
TSPAN4-220ENST00000532375 RBBP4Q09028 425 aa12.49□□□□□ -0.41
TSPAN4-220ENST00000532375 SELENBP1Q13228 472 aa12.49□□□□□ -0.41
TSPAN4-220ENST00000532375 PON3Q15166 354 aa12.49□□□□□ -0.41
TSPAN4-220ENST00000532375 ZSWIM7Q19AV6 140 aa12.49□□□□□ -0.41
TSPAN4-220ENST00000532375 SLC25A35Q3KQZ1 300 aa12.49□□□□□ -0.41
TSPAN4-220ENST00000532375 TMEM176BQ3YBM2 270 aaPredicted RBP12.49□□□□□ -0.41
TSPAN4-220ENST00000532375 FBXL19-AS1Q494R0 122 aa12.49□□□□□ -0.41
TSPAN4-220ENST00000532375 ZNF311Q5JNZ3 666 aa12.49□□□□□ -0.41
TSPAN4-220ENST00000532375 GRINAQ7Z429 371 aa12.49□□□□□ -0.41
TSPAN4-220ENST00000532375 CPLX4Q7Z7G2 160 aa12.49□□□□□ -0.41
TSPAN4-220ENST00000532375 GCNT2Q8N0V5 402 aa12.49□□□□□ -0.41
TSPAN4-220ENST00000532375 HIPK4Q8NE63 616 aa12.49□□□□□ -0.41
TSPAN4-220ENST00000532375 OR8J3Q8NGG0 315 aa12.49□□□□□ -0.41
TSPAN4-220ENST00000532375 OR10A6Q8NH74 314 aa12.49□□□□□ -0.41
TSPAN4-220ENST00000532375 TMEM234Q8WY98 164 aa12.49□□□□□ -0.41
TSPAN4-220ENST00000532375 OSTF1Q92882 214 aa12.49□□□□□ -0.41
TSPAN4-220ENST00000532375 SLC35B4Q969S0 331 aa12.49□□□□□ -0.41
TSPAN4-220ENST00000532375 INTS12Q96CB8 462 aaKnown RBP12.49□□□□□ -0.41
TSPAN4-220ENST00000532375 RCN3Q96D15 328 aa12.49□□□□□ -0.41
TSPAN4-220ENST00000532375 ZNF583Q96ND8 569 aa12.49□□□□□ -0.41
TSPAN4-220ENST00000532375 SRXN1Q9BYN0 137 aa12.49□□□□□ -0.41
TSPAN4-220ENST00000532375 FAM107BQ9H098 131 aa12.49□□□□□ -0.41
TSPAN4-220ENST00000532375 CHST11Q9NPF2 352 aa12.49□□□□□ -0.41
TSPAN4-220ENST00000532375 CTPS2Q9NRF8 586 aa12.49□□□□□ -0.41
TSPAN4-220ENST00000532375 STOML1Q9UBI4 398 aa12.49□□□□□ -0.41
TSPAN4-220ENST00000532375 PRDM4Q9UKN5 801 aa12.49□□□□□ -0.41
TSPAN4-220ENST00000532375 ZNF232Q9UNY5 417 aa12.49□□□□□ -0.41
TSPAN4-220ENST00000532375 USP22Q9UPT9 525 aa12.49□□□□□ -0.41
TSPAN4-220ENST00000532375 CENPEQ02224 2701 aa12.49□□□□□ -0.41
TSPAN4-220ENST00000532375 A0A1W2PNR3 127 aa12.48□□□□□ -0.41
TSPAN4-220ENST00000532375 A0A1W2PNV4 684 aa12.48□□□□□ -0.41
TSPAN4-220ENST00000532375 TMEM247A6NEH6 219 aa12.48□□□□□ -0.41
TSPAN4-220ENST00000532375 C5orf58C9J3I9 102 aa12.48□□□□□ -0.41
TSPAN4-220ENST00000532375 SYT5O00445 386 aa12.48□□□□□ -0.41
TSPAN4-220ENST00000532375 FRS3O43559 492 aa12.48□□□□□ -0.41
TSPAN4-220ENST00000532375 BMP5P22003 454 aa12.48□□□□□ -0.41
TSPAN4-220ENST00000532375 PRKAR1BP31321 381 aa12.48□□□□□ -0.41
TSPAN4-220ENST00000532375 APOBEC1P41238 236 aaKnown RBP12.48□□□□□ -0.41
TSPAN4-220ENST00000532375 SLC1A3P43003 542 aa12.48□□□□□ -0.41
TSPAN4-220ENST00000532375 DMTNQ08495 405 aa12.48□□□□□ -0.41
TSPAN4-220ENST00000532375 MERTKQ12866 999 aa12.48□□□□□ -0.41
TSPAN4-220ENST00000532375 LARS2Q15031 903 aaKnown RBP12.48□□□□□ -0.41
TSPAN4-220ENST00000532375 HBMQ6B0K9 141 aa12.48□□□□□ -0.41
TSPAN4-220ENST00000532375 DHRS4L2Q6PKH6 230 aa12.48□□□□□ -0.41
TSPAN4-220ENST00000532375 ZNF440Q8IYI8 595 aa12.48□□□□□ -0.41
TSPAN4-220ENST00000532375 C11orf65Q8NCR3 313 aa12.48□□□□□ -0.41
TSPAN4-220ENST00000532375 STARD4Q96DR4 205 aa12.48□□□□□ -0.41
TSPAN4-220ENST00000532375 SPOCK3Q9BQ16 436 aa12.48□□□□□ -0.41
TSPAN4-220ENST00000532375 PAQR5Q9NXK6 330 aaPredicted RBP12.48□□□□□ -0.41
TSPAN4-220ENST00000532375 OSGIN1Q9UJX0 560 aa12.48□□□□□ -0.41
TSPAN4-220ENST00000532375 TMEM229AB2RXF0 380 aa12.47□□□□□ -0.41
TSPAN4-220ENST00000532375 DVL2O14641 736 aa12.47□□□□□ -0.41
TSPAN4-220ENST00000532375 TPST2O60704 377 aa12.47□□□□□ -0.41
TSPAN4-220ENST00000532375 CGAP01215 116 aa12.47□□□□□ -0.41
TSPAN4-220ENST00000532375 CRHP06850 196 aa12.47□□□□□ -0.41
TSPAN4-220ENST00000532375 KLK2P20151 261 aa12.47□□□□□ -0.41
TSPAN4-220ENST00000532375 ME2P23368 584 aa12.47□□□□□ -0.41
TSPAN4-220ENST00000532375 AQP1P29972 269 aa12.47□□□□□ -0.41
TSPAN4-220ENST00000532375 OPRM1P35372 400 aa12.47□□□□□ -0.41
TSPAN4-220ENST00000532375 CARD18P57730 90 aa12.47□□□□□ -0.41
TSPAN4-220ENST00000532375 SGCBQ16585 318 aa12.47□□□□□ -0.41
TSPAN4-220ENST00000532375 DUSP7Q16829 419 aa12.47□□□□□ -0.41
TSPAN4-220ENST00000532375 VMACQ2NL98 169 aa12.47□□□□□ -0.41
TSPAN4-220ENST00000532375 MMEL1Q495T6 779 aa12.47□□□□□ -0.41
TSPAN4-220ENST00000532375 VWA1Q6PCB0 445 aa12.47□□□□□ -0.41
TSPAN4-220ENST00000532375 CCDC80Q76M96 950 aa12.47□□□□□ -0.41
TSPAN4-220ENST00000532375 CHMP1BQ7LBR1 199 aa12.47□□□□□ -0.41
TSPAN4-220ENST00000532375 SLC15A3Q8IY34 581 aa12.47□□□□□ -0.41
TSPAN4-220ENST00000532375 ZNF295-AS1Q8N0V1 137 aa12.47□□□□□ -0.41
TSPAN4-220ENST00000532375 PCYOX1LQ8NBM8 494 aa12.47□□□□□ -0.41
TSPAN4-220ENST00000532375 ATP6V1C2Q8NEY4 427 aa12.47□□□□□ -0.41
TSPAN4-220ENST00000532375 GPR32P1Q8NGA4 272 aa12.47□□□□□ -0.41
TSPAN4-220ENST00000532375 ZNF563Q8TA94 476 aa12.47□□□□□ -0.41
TSPAN4-220ENST00000532375 ROBO4Q8WZ75 1007 aa12.47□□□□□ -0.41
TSPAN4-220ENST00000532375 ARL5BQ96KC2 179 aa12.47□□□□□ -0.41
TSPAN4-220ENST00000532375 SFXN3Q9BWM7 321 aa12.47□□□□□ -0.41
TSPAN4-220ENST00000532375 CMTM6Q9NX76 183 aa12.47□□□□□ -0.41
TSPAN4-220ENST00000532375 GMPR2Q9P2T1 348 aaKnown RBP12.47□□□□□ -0.41
TSPAN4-220ENST00000532375 ING1Q9UK53 422 aaPredicted RBP12.47□□□□□ -0.41
TSPAN4-220ENST00000532375 ITPR2Q14571 2701 aa12.47□□□□□ -0.41
TSPAN4-220ENST00000532375 DCHS2Q6V1P9 2916 aa12.47□□□□□ -0.41
TSPAN4-220ENST00000532375 TMED7-TICAM2A0A0A6YYA0 188 aa12.46□□□□□ -0.41
TSPAN4-220ENST00000532375 M0QX08 132 aa12.46□□□□□ -0.41
TSPAN4-220ENST00000532375 ENPP1P22413 925 aa12.46□□□□□ -0.41
TSPAN4-220ENST00000532375 TACR3P29371 465 aa12.46□□□□□ -0.41
TSPAN4-220ENST00000532375 PCGF2P35227 344 aa12.46□□□□□ -0.41
TSPAN4-220ENST00000532375 HTR3AP46098 478 aa12.46□□□□□ -0.41
TSPAN4-220ENST00000532375 RAC3P60763 192 aa12.46□□□□□ -0.41
TSPAN4-220ENST00000532375 HOXC5Q00444 222 aa12.46□□□□□ -0.41
TSPAN4-220ENST00000532375 ZNF239Q16600 458 aaKnown RBP12.46□□□□□ -0.41
TSPAN4-220ENST00000532375 CYP51A1Q16850 503 aa12.46□□□□□ -0.41
TSPAN4-220ENST00000532375 SYT14P1Q58G82 188 aa12.46□□□□□ -0.41
TSPAN4-220ENST00000532375 OR2A2Q6IF42 318 aa12.46□□□□□ -0.41
TSPAN4-220ENST00000532375 C3orf33Q6P1S2 294 aa12.46□□□□□ -0.41
TSPAN4-220ENST00000532375 TMPPEQ6ZT21 453 aa12.46□□□□□ -0.41
TSPAN4-220ENST00000532375 ZNF550Q7Z398 422 aa12.46□□□□□ -0.41
TSPAN4-220ENST00000532375 BTLAQ7Z6A9 289 aa12.46□□□□□ -0.41
TSPAN4-220ENST00000532375 TAMM41Q96BW9 452 aa12.46□□□□□ -0.41
TSPAN4-220ENST00000532375 CCT8L2Q96SF2 557 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms