RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 WWTR1Q9GZV5 400 aa11.28□□□□□ -0.6
CHD7-211ENST00000532149 SDHAF3Q9NRP4 125 aa11.28□□□□□ -0.6
CHD7-211ENST00000532149 NDUFB11Q9NX14 153 aa11.28□□□□□ -0.6
CHD7-211ENST00000532149 DNAJC27Q9NZQ0 273 aa11.28□□□□□ -0.6
CHD7-211ENST00000532149 CRNNQ9UBG3 495 aaPredicted RBP11.28□□□□□ -0.6
CHD7-211ENST00000532149 OSGIN1Q9UJX0 560 aa11.28□□□□□ -0.6
CHD7-211ENST00000532149 SSR3Q9UNL2 185 aa11.28□□□□□ -0.6
CHD7-211ENST00000532149 GSTK1Q9Y2Q3 226 aa11.28□□□□□ -0.6
CHD7-211ENST00000532149 LSM2Q9Y333 95 aaKnown RBP11.28□□□□□ -0.6
CHD7-211ENST00000532149 CAB39Q9Y376 341 aaPredicted RBP11.28□□□□□ -0.6
CHD7-211ENST00000532149 CABIN1Q9Y6J0 2220 aa11.28□□□□□ -0.6
CHD7-211ENST00000532149 PCDH15Q96QU1 1955 aa11.27□□□□□ -0.61
CHD7-211ENST00000532149 ARID1BQ8NFD5 2236 aaPredicted RBP11.27□□□□□ -0.61
CHD7-211ENST00000532149 SCN2AQ99250 2005 aa11.27□□□□□ -0.61
CHD7-211ENST00000532149 LY6G6EA0A0G2JKS1 128 aa11.27□□□□□ -0.61
CHD7-211ENST00000532149 SAGE2PA6NJ88 616 aa11.27□□□□□ -0.61
CHD7-211ENST00000532149 TAF4O00268 1085 aa11.27□□□□□ -0.61
CHD7-211ENST00000532149 ALOX12BO75342 701 aa11.27□□□□□ -0.61
CHD7-211ENST00000532149 REM1O75628 298 aa11.27□□□□□ -0.61
CHD7-211ENST00000532149 MT-ATP6P00846 226 aa11.27□□□□□ -0.61
CHD7-211ENST00000532149 PTHP01270 115 aa11.27□□□□□ -0.61
CHD7-211ENST00000532149 MSX1P28360 303 aa11.27□□□□□ -0.61
CHD7-211ENST00000532149 LIPAP38571 399 aa11.27□□□□□ -0.61
CHD7-211ENST00000532149 GPR4P46093 362 aa11.27□□□□□ -0.61
CHD7-211ENST00000532149 RFX3P48380 749 aa11.27□□□□□ -0.61
CHD7-211ENST00000532149 RNF144AP50876 292 aaPredicted RBP11.27□□□□□ -0.61
CHD7-211ENST00000532149 EMP2P54851 167 aa11.27□□□□□ -0.61
CHD7-211ENST00000532149 TAS2R43P59537 309 aa11.27□□□□□ -0.61
CHD7-211ENST00000532149 HOXC5Q00444 222 aa11.27□□□□□ -0.61
CHD7-211ENST00000532149 PLCXD2Q0VAA5 305 aa11.27□□□□□ -0.61
CHD7-211ENST00000532149 SKP2Q13309 424 aa11.27□□□□□ -0.61
CHD7-211ENST00000532149 CBFBQ13951 182 aa11.27□□□□□ -0.61
CHD7-211ENST00000532149 MFSD13AQ14CX5 517 aa11.27□□□□□ -0.61
CHD7-211ENST00000532149 TSSK4Q6SA08 328 aa11.27□□□□□ -0.61
CHD7-211ENST00000532149 ZNF574Q6ZN55 896 aaPredicted RBP11.27□□□□□ -0.61
CHD7-211ENST00000532149 DBX2Q6ZNG2 339 aa11.27□□□□□ -0.61
CHD7-211ENST00000532149 SLCO6A1Q86UG4 719 aa11.27□□□□□ -0.61
CHD7-211ENST00000532149 MAML2Q8IZL2 1156 aaPredicted RBP11.27□□□□□ -0.61
CHD7-211ENST00000532149 NLGN4XQ8N0W4 816 aa11.27□□□□□ -0.61
CHD7-211ENST00000532149 KLHL36Q8N4N3 616 aa11.27□□□□□ -0.61
CHD7-211ENST00000532149 EID2Q8N6I1 236 aa11.27□□□□□ -0.61
CHD7-211ENST00000532149 ACBD7Q8N6N7 88 aa11.27□□□□□ -0.61
CHD7-211ENST00000532149 POMGNT2Q8NAT1 580 aa11.27□□□□□ -0.61
CHD7-211ENST00000532149 MINDY2Q8NBR6 621 aa11.27□□□□□ -0.61
CHD7-211ENST00000532149 ZBTB44Q8NCP5 570 aa11.27□□□□□ -0.61
CHD7-211ENST00000532149 OR4N2Q8NGD1 307 aa11.27□□□□□ -0.61
CHD7-211ENST00000532149 OR8D4Q8NGM9 314 aa11.27□□□□□ -0.61
CHD7-211ENST00000532149 PHOSPHO1Q8TCT1 267 aa11.27□□□□□ -0.61
CHD7-211ENST00000532149 NACC2Q96BF6 587 aa11.27□□□□□ -0.61
CHD7-211ENST00000532149 ARSGQ96EG1 525 aa11.27□□□□□ -0.61
CHD7-211ENST00000532149 SAMD8Q96LT4 415 aa11.27□□□□□ -0.61
CHD7-211ENST00000532149 IFT27Q9BW83 186 aa11.27□□□□□ -0.61
CHD7-211ENST00000532149 DPH1Q9BZG8 443 aa11.27□□□□□ -0.61
CHD7-211ENST00000532149 TBL1XR1Q9BZK7 514 aa11.27□□□□□ -0.61
CHD7-211ENST00000532149 PLA2G12AQ9BZM1 189 aa11.27□□□□□ -0.61
CHD7-211ENST00000532149 NAA50Q9GZZ1 169 aaKnown RBP11.27□□□□□ -0.61
CHD7-211ENST00000532149 ADAM19Q9H013 955 aa11.27□□□□□ -0.61
CHD7-211ENST00000532149 NXF5Q9H1B4 397 aaKnown RBP11.27□□□□□ -0.61
CHD7-211ENST00000532149 DCSTAMPQ9H295 470 aa11.27□□□□□ -0.61
CHD7-211ENST00000532149 FLRT3Q9NZU0 649 aa11.27□□□□□ -0.61
CHD7-211ENST00000532149 AASSQ9UDR5 926 aa11.27□□□□□ -0.61
CHD7-211ENST00000532149 STUB1Q9UNE7 303 aa11.27□□□□□ -0.61
CHD7-211ENST00000532149 PCDHGA3Q9Y5H0 932 aa11.27□□□□□ -0.61
CHD7-211ENST00000532149 PEX16Q9Y5Y5 336 aa11.27□□□□□ -0.61
CHD7-211ENST00000532149 U3KQA8 63 aa11.27□□□□□ -0.61
CHD7-211ENST00000532149 CENPVL1A0A0U1RR11 272 aa11.26□□□□□ -0.61
CHD7-211ENST00000532149 A0A1W2PQM1 296 aa11.26□□□□□ -0.61
CHD7-211ENST00000532149 TMEM221A6NGB7 291 aa11.26□□□□□ -0.61
CHD7-211ENST00000532149 B4E171 279 aa11.26□□□□□ -0.61
CHD7-211ENST00000532149 M0R296 226 aa11.26□□□□□ -0.61
CHD7-211ENST00000532149 HRKO00198 91 aa11.26□□□□□ -0.61
CHD7-211ENST00000532149 CDC42EP2O14613 210 aa11.26□□□□□ -0.61
CHD7-211ENST00000532149 FLRT2O43155 660 aa11.26□□□□□ -0.61
CHD7-211ENST00000532149 NDUFB5O43674 189 aa11.26□□□□□ -0.61
CHD7-211ENST00000532149 OR7A10O76100 309 aa11.26□□□□□ -0.61
CHD7-211ENST00000532149 INHBBP09529 407 aa11.26□□□□□ -0.61
CHD7-211ENST00000532149 TSPAN19P0C672 248 aa11.26□□□□□ -0.61
CHD7-211ENST00000532149 FUT4P22083 530 aa11.26□□□□□ -0.61
CHD7-211ENST00000532149 CFL1P23528 166 aaKnown RBP11.26□□□□□ -0.61
CHD7-211ENST00000532149 ACP1P24666 158 aa11.26□□□□□ -0.61
CHD7-211ENST00000532149 NOS3P29474 1203 aa11.26□□□□□ -0.61
CHD7-211ENST00000532149 CD40LGP29965 261 aa11.26□□□□□ -0.61
CHD7-211ENST00000532149 S100A5P33763 92 aa11.26□□□□□ -0.61
CHD7-211ENST00000532149 TSPAN7P41732 249 aa11.26□□□□□ -0.61
CHD7-211ENST00000532149 LIMK1P53667 647 aa11.26□□□□□ -0.61
CHD7-211ENST00000532149 MC2RQ01718 297 aa11.26□□□□□ -0.61
CHD7-211ENST00000532149 HSF2Q03933 536 aa11.26□□□□□ -0.61
CHD7-211ENST00000532149 ZFP36L1Q07352 338 aaKnown RBP11.26□□□□□ -0.61
CHD7-211ENST00000532149 MRPL28Q13084 256 aaKnown RBP11.26□□□□□ -0.61
CHD7-211ENST00000532149 KRR1Q13601 381 aaKnown RBP11.26□□□□□ -0.61
CHD7-211ENST00000532149 SPCS2Q15005 226 aa11.26□□□□□ -0.61
CHD7-211ENST00000532149 ZNF404Q494X3 552 aa11.26□□□□□ -0.61
CHD7-211ENST00000532149 TRIM61Q5EBN2 209 aa11.26□□□□□ -0.61
CHD7-211ENST00000532149 GPR139Q6DWJ6 353 aa11.26□□□□□ -0.61
CHD7-211ENST00000532149 SLC30A6Q6NXT4 461 aa11.26□□□□□ -0.61
CHD7-211ENST00000532149 TMEM205Q6UW68 189 aa11.26□□□□□ -0.61
CHD7-211ENST00000532149 HMGN2P46Q86SG4 172 aa11.26□□□□□ -0.61
CHD7-211ENST00000532149 ZAR1Q86SH2 424 aa11.26□□□□□ -0.61
CHD7-211ENST00000532149 GATAD2AQ86YP4 633 aa11.26□□□□□ -0.61
CHD7-211ENST00000532149 CADM2Q8N3J6 435 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms