RNA–Protein interactions for RNA: ENST00000531007.1

CTNND1-228, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-228ENST00000531007 TMCO5AQ8N6Q1 288 aa9□□□□□ -0.97
CTNND1-228ENST00000531007 ZNF563Q8TA94 476 aa9□□□□□ -0.97
CTNND1-228ENST00000531007 GRHL3Q8TE85 626 aa9□□□□□ -0.97
CTNND1-228ENST00000531007 PAQR8Q8TEZ7 354 aa9□□□□□ -0.97
CTNND1-228ENST00000531007 HRASLS5Q96KN8 279 aa9□□□□□ -0.97
CTNND1-228ENST00000531007 PITX2Q99697 317 aa9□□□□□ -0.97
CTNND1-228ENST00000531007 PRSS27Q9BQR3 290 aa9□□□□□ -0.97
CTNND1-228ENST00000531007 DPH1Q9BZG8 443 aa9□□□□□ -0.97
CTNND1-228ENST00000531007 ADAM19Q9H013 955 aa9□□□□□ -0.97
CTNND1-228ENST00000531007 CDCP1Q9H5V8 836 aa9□□□□□ -0.97
CTNND1-228ENST00000531007 PTGES2Q9H7Z7 377 aa9□□□□□ -0.97
CTNND1-228ENST00000531007 METTL7AQ9H8H3 244 aa9□□□□□ -0.97
CTNND1-228ENST00000531007 PNPLA3Q9NST1 481 aa9□□□□□ -0.97
CTNND1-228ENST00000531007 HPF1Q9NWY4 346 aa9□□□□□ -0.97
CTNND1-228ENST00000531007 KLRF1Q9NZS2 232 aa9□□□□□ -0.97
CTNND1-228ENST00000531007 RHCGQ9UBD6 479 aa9□□□□□ -0.97
CTNND1-228ENST00000531007 CARD8Q9Y2G2 431 aa9□□□□□ -0.97
CTNND1-228ENST00000531007 MAGED1Q9Y5V3 778 aaPredicted RBP9□□□□□ -0.97
CTNND1-228ENST00000531007 WIF1Q9Y5W5 379 aa9□□□□□ -0.97
CTNND1-228ENST00000531007 MAGEA13PA6NCF6 341 aa8.99□□□□□ -0.97
CTNND1-228ENST00000531007 ZNF891A8MT65 544 aaPredicted RBP8.99□□□□□ -0.97
CTNND1-228ENST00000531007 FAM47E-STBD1D6RA91 191 aa8.99□□□□□ -0.97
CTNND1-228ENST00000531007 E9PQ18 207 aa8.99□□□□□ -0.97
CTNND1-228ENST00000531007 ETV2O00321 342 aaPredicted RBP8.99□□□□□ -0.97
CTNND1-228ENST00000531007 BCKDKO14874 412 aa8.99□□□□□ -0.97
CTNND1-228ENST00000531007 TNFAIP8O95379 198 aa8.99□□□□□ -0.97
CTNND1-228ENST00000531007 GP1BBP13224 206 aa8.99□□□□□ -0.97
CTNND1-228ENST00000531007 PRG2P13727 222 aa8.99□□□□□ -0.97
CTNND1-228ENST00000531007 LIFP15018 202 aa8.99□□□□□ -0.97
CTNND1-228ENST00000531007 ITPKBP27987 946 aa8.99□□□□□ -0.97
CTNND1-228ENST00000531007 SOX3P41225 446 aa8.99□□□□□ -0.97
CTNND1-228ENST00000531007 EIF1P41567 113 aaKnown RBP8.99□□□□□ -0.97
CTNND1-228ENST00000531007 OMPP47874 163 aa8.99□□□□□ -0.97
CTNND1-228ENST00000531007 IDH2P48735 452 aaKnown RBP8.99□□□□□ -0.97
CTNND1-228ENST00000531007 SLC9A3P48764 834 aa8.99□□□□□ -0.97
CTNND1-228ENST00000531007 HLCSP50747 726 aa8.99□□□□□ -0.97
CTNND1-228ENST00000531007 GAS1P54826 345 aa8.99□□□□□ -0.97
CTNND1-228ENST00000531007 TPD52P55327 224 aaPredicted RBP8.99□□□□□ -0.97
CTNND1-228ENST00000531007 ZNF117Q03924 483 aa8.99□□□□□ -0.97
CTNND1-228ENST00000531007 SEC23BQ15437 767 aa8.99□□□□□ -0.97
CTNND1-228ENST00000531007 ABHD17BQ5VST6 288 aa8.99□□□□□ -0.97
CTNND1-228ENST00000531007 SLC22A10Q63ZE4 541 aa8.99□□□□□ -0.97
CTNND1-228ENST00000531007 RASSF6Q6ZTQ3 369 aa8.99□□□□□ -0.97
CTNND1-228ENST00000531007 GRINAQ7Z429 371 aa8.99□□□□□ -0.97
CTNND1-228ENST00000531007 THAP5Q7Z6K1 395 aa8.99□□□□□ -0.97
CTNND1-228ENST00000531007 ZER1Q7Z7L7 766 aa8.99□□□□□ -0.97
CTNND1-228ENST00000531007 NKAIN4Q8IVV8 208 aa8.99□□□□□ -0.97
CTNND1-228ENST00000531007 OR10G3Q8NGC4 313 aa8.99□□□□□ -0.97
CTNND1-228ENST00000531007 OR9Q2Q8NGE9 314 aa8.99□□□□□ -0.97
CTNND1-228ENST00000531007 DUSP19Q8WTR2 217 aa8.99□□□□□ -0.97
CTNND1-228ENST00000531007 TRUB1Q8WWH5 349 aaKnown RBP8.99□□□□□ -0.97
CTNND1-228ENST00000531007 OSTF1Q92882 214 aa8.99□□□□□ -0.97
CTNND1-228ENST00000531007 C3orf49Q96BT1 292 aa8.99□□□□□ -0.97
CTNND1-228ENST00000531007 NTNG2Q96CW9 530 aa8.99□□□□□ -0.97
CTNND1-228ENST00000531007 THOC3Q96J01 351 aaKnown RBP8.99□□□□□ -0.97
CTNND1-228ENST00000531007 NODALQ96S42 347 aa8.99□□□□□ -0.97
CTNND1-228ENST00000531007 MBOAT4Q96T53 435 aa8.99□□□□□ -0.97
CTNND1-228ENST00000531007 BARD1Q99728 777 aaKnown RBP8.99□□□□□ -0.97
CTNND1-228ENST00000531007 NIPSNAP1Q9BPW8 284 aa8.99□□□□□ -0.97
CTNND1-228ENST00000531007 MESP1Q9BRJ9 268 aa8.99□□□□□ -0.97
CTNND1-228ENST00000531007 ANGPTL4Q9BY76 406 aa8.99□□□□□ -0.97
CTNND1-228ENST00000531007 NDEL1Q9GZM8 345 aa8.99□□□□□ -0.97
CTNND1-228ENST00000531007 RNF32Q9H0A6 362 aa8.99□□□□□ -0.97
CTNND1-228ENST00000531007 SH2D2AQ9NP31 389 aa8.99□□□□□ -0.97
CTNND1-228ENST00000531007 BRD7Q9NPI1 651 aa8.99□□□□□ -0.97
CTNND1-228ENST00000531007 FLRT3Q9NZU0 649 aa8.99□□□□□ -0.97
CTNND1-228ENST00000531007 PPP4R1LQ9P1A2 415 aa8.99□□□□□ -0.97
CTNND1-228ENST00000531007 IL17BQ9UHF5 180 aa8.99□□□□□ -0.97
CTNND1-228ENST00000531007 NDRG4Q9ULP0 352 aaKnown RBP8.99□□□□□ -0.97
CTNND1-228ENST00000531007 GMPPBQ9Y5P6 360 aa8.99□□□□□ -0.97
CTNND1-228ENST00000531007 CHCHD2Q9Y6H1 151 aaPredicted RBP8.99□□□□□ -0.97
CTNND1-228ENST00000531007 NINQ8N4C6 2090 aa8.98□□□□□ -0.97
CTNND1-228ENST00000531007 CEP295Q9C0D2 2601 aa8.98□□□□□ -0.97
CTNND1-228ENST00000531007 TRABD2BA6NFA1 517 aa8.98□□□□□ -0.97
CTNND1-228ENST00000531007 ELOA3DA6NLF2 546 aaPredicted RBP8.98□□□□□ -0.97
CTNND1-228ENST00000531007 M0R3G1 203 aa8.98□□□□□ -0.97
CTNND1-228ENST00000531007 KLF4O43474 513 aa8.98□□□□□ -0.97
CTNND1-228ENST00000531007 SCO2O43819 266 aa8.98□□□□□ -0.97
CTNND1-228ENST00000531007 ZNF354AO60765 605 aaPredicted RBP8.98□□□□□ -0.97
CTNND1-228ENST00000531007 RCBTB2O95199 551 aa8.98□□□□□ -0.97
CTNND1-228ENST00000531007 LYPD3O95274 346 aa8.98□□□□□ -0.97
CTNND1-228ENST00000531007 THY1P04216 161 aa8.98□□□□□ -0.97
CTNND1-228ENST00000531007 APOBEC1P41238 236 aaKnown RBP8.98□□□□□ -0.97
CTNND1-228ENST00000531007 CYB561P49447 251 aa8.98□□□□□ -0.97
CTNND1-228ENST00000531007 CCR4P51679 360 aa8.98□□□□□ -0.97
CTNND1-228ENST00000531007 POLR2HP52434 150 aaKnown RBP8.98□□□□□ -0.97
CTNND1-228ENST00000531007 CHN2P52757 468 aa8.98□□□□□ -0.97
CTNND1-228ENST00000531007 CRISP1P54107 249 aa8.98□□□□□ -0.97
CTNND1-228ENST00000531007 CDC42P60953 191 aa8.98□□□□□ -0.97
CTNND1-228ENST00000531007 CXCR4P61073 352 aa8.98□□□□□ -0.97
CTNND1-228ENST00000531007 HOXC5Q00444 222 aa8.98□□□□□ -0.97
CTNND1-228ENST00000531007 IL1RL1Q01638 556 aa8.98□□□□□ -0.97
CTNND1-228ENST00000531007 Q0VFX4 171 aa8.98□□□□□ -0.97
CTNND1-228ENST00000531007 TOP3AQ13472 1001 aaPredicted RBP8.98□□□□□ -0.97
CTNND1-228ENST00000531007 COL28A1Q2UY09 1125 aa8.98□□□□□ -0.97
CTNND1-228ENST00000531007 ZIK1Q3SY52 487 aaPredicted RBP8.98□□□□□ -0.97
CTNND1-228ENST00000531007 ELOA3BQ3SY89 546 aa8.98□□□□□ -0.97
CTNND1-228ENST00000531007 GLYR1Q49A26 553 aaPredicted RBP8.98□□□□□ -0.97
CTNND1-228ENST00000531007 SLC25A53Q5H9E4 307 aa8.98□□□□□ -0.97
CTNND1-228ENST00000531007 ZNF691Q5VV52 312 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms