RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 SLC22A8Q8TCC7 542 aa13.14□□□□□ -0.31
TTC39A-216ENST00000530004 RASL10BQ96S79 203 aa13.14□□□□□ -0.31
TTC39A-216ENST00000530004 LAT2Q9GZY6 243 aa13.14□□□□□ -0.31
TTC39A-216ENST00000530004 SELENONQ9NZV5 590 aa13.14□□□□□ -0.31
TTC39A-216ENST00000530004 RNF6Q9Y252 685 aa13.14□□□□□ -0.31
TTC39A-216ENST00000530004 YARS2Q9Y2Z4 477 aaKnown RBP13.14□□□□□ -0.31
TTC39A-216ENST00000530004 KPNA4O00629 521 aaPredicted RBP13.13□□□□□ -0.31
TTC39A-216ENST00000530004 HCRTR2O43614 444 aa13.13□□□□□ -0.31
TTC39A-216ENST00000530004 OR6B1O95007 311 aa13.13□□□□□ -0.31
TTC39A-216ENST00000530004 ANGPTL1O95841 491 aa13.13□□□□□ -0.31
TTC39A-216ENST00000530004 NAGAP17050 411 aa13.13□□□□□ -0.31
TTC39A-216ENST00000530004 ENDOUP21128 410 aaKnown RBP13.13□□□□□ -0.31
TTC39A-216ENST00000530004 FPR3P25089 353 aa13.13□□□□□ -0.31
TTC39A-216ENST00000530004 ZNF117Q03924 483 aa13.13□□□□□ -0.31
TTC39A-216ENST00000530004 APOFQ13790 326 aa13.13□□□□□ -0.31
TTC39A-216ENST00000530004 AGAP7PQ5VUJ5 663 aa13.13□□□□□ -0.31
TTC39A-216ENST00000530004 DEPDC4Q8N2C3 294 aa13.13□□□□□ -0.31
TTC39A-216ENST00000530004 SLC15A4Q8N697 577 aa13.13□□□□□ -0.31
TTC39A-216ENST00000530004 DNAJA4Q8WW22 397 aaPredicted RBP13.13□□□□□ -0.31
TTC39A-216ENST00000530004 MPP4Q96JB8 637 aa13.13□□□□□ -0.31
TTC39A-216ENST00000530004 HS6ST2Q96MM7 605 aa13.13□□□□□ -0.31
TTC39A-216ENST00000530004 AGAP4Q96P64 663 aa13.13□□□□□ -0.31
TTC39A-216ENST00000530004 DSN1Q9H410 356 aa13.13□□□□□ -0.31
TTC39A-216ENST00000530004 STMN3Q9NZ72 180 aa13.13□□□□□ -0.31
TTC39A-216ENST00000530004 MED31Q9Y3C7 131 aa13.13□□□□□ -0.31
TTC39A-216ENST00000530004 MED13Q9UHV7 2174 aa13.13□□□□□ -0.31
TTC39A-216ENST00000530004 PTPRQQ9UMZ3 2332 aa13.13□□□□□ -0.31
TTC39A-216ENST00000530004 TRIM64A6NGJ6 449 aa13.12□□□□□ -0.31
TTC39A-216ENST00000530004 C17orf51A8MQB3 221 aa13.12□□□□□ -0.31
TTC39A-216ENST00000530004 KLF4O43474 513 aa13.12□□□□□ -0.31
TTC39A-216ENST00000530004 GMFGO60234 142 aa13.12□□□□□ -0.31
TTC39A-216ENST00000530004 CLPTM1O96005 669 aa13.12□□□□□ -0.31
TTC39A-216ENST00000530004 IFI30P13284 250 aa13.12□□□□□ -0.31
TTC39A-216ENST00000530004 CRHBPP24387 322 aa13.12□□□□□ -0.31
TTC39A-216ENST00000530004 FMO3P31513 532 aa13.12□□□□□ -0.31
TTC39A-216ENST00000530004 RBM34P42696 430 aaKnown RBP13.12□□□□□ -0.31
TTC39A-216ENST00000530004 SLC6A8P48029 635 aa13.12□□□□□ -0.31
TTC39A-216ENST00000530004 TMED10P49755 219 aaKnown RBP13.12□□□□□ -0.31
TTC39A-216ENST00000530004 CDC42P60953 191 aa13.12□□□□□ -0.31
TTC39A-216ENST00000530004 TOP3AQ13472 1001 aaPredicted RBP13.12□□□□□ -0.31
TTC39A-216ENST00000530004 TBR1Q16650 682 aa13.12□□□□□ -0.31
TTC39A-216ENST00000530004 ABHD17BQ5VST6 288 aa13.12□□□□□ -0.31
TTC39A-216ENST00000530004 WBP2NLQ6ICG8 309 aa13.12□□□□□ -0.31
TTC39A-216ENST00000530004 LYPD8Q6UX82 237 aa13.12□□□□□ -0.31
TTC39A-216ENST00000530004 RASSF6Q6ZTQ3 369 aa13.12□□□□□ -0.31
TTC39A-216ENST00000530004 KIF18BQ86Y91 864 aa13.12□□□□□ -0.31
TTC39A-216ENST00000530004 HGDQ93099 445 aa13.12□□□□□ -0.31
TTC39A-216ENST00000530004 TMCO6Q96DC7 493 aa13.12□□□□□ -0.31
TTC39A-216ENST00000530004 CRELD1Q96HD1 420 aa13.12□□□□□ -0.31
TTC39A-216ENST00000530004 CNTNAP3BQ96NU0 1288 aa13.12□□□□□ -0.31
TTC39A-216ENST00000530004 NODALQ96S42 347 aa13.12□□□□□ -0.31
TTC39A-216ENST00000530004 ZNF426Q9BUY5 554 aa13.12□□□□□ -0.31
TTC39A-216ENST00000530004 CNTNAP3Q9BZ76 1288 aa13.12□□□□□ -0.31
TTC39A-216ENST00000530004 EGLN3Q9H6Z9 239 aa13.12□□□□□ -0.31
TTC39A-216ENST00000530004 C20orf141Q9NUB4 165 aa13.12□□□□□ -0.31
TTC39A-216ENST00000530004 RYDENQ9NUL5 291 aaKnown RBP13.12□□□□□ -0.31
TTC39A-216ENST00000530004 IMPAD1Q9NX62 359 aa13.12□□□□□ -0.31
TTC39A-216ENST00000530004 CFAP47Q6ZTR5 3102 aa13.12□□□□□ -0.31
TTC39A-216ENST00000530004 DPPA5A6NC42 116 aa13.12□□□□□ -0.31
TTC39A-216ENST00000530004 SLC1A7O00341 560 aa13.12□□□□□ -0.31
TTC39A-216ENST00000530004 GNB5O14775 395 aa13.12□□□□□ -0.31
TTC39A-216ENST00000530004 EIF4E2O60573 245 aaKnown RBP13.12□□□□□ -0.31
TTC39A-216ENST00000530004 ITGB2P05107 769 aa13.12□□□□□ -0.31
TTC39A-216ENST00000530004 SSR4P51571 173 aa13.12□□□□□ -0.31
TTC39A-216ENST00000530004 PRKCDQ05655 676 aa13.12□□□□□ -0.31
TTC39A-216ENST00000530004 SLX4IPQ5VYV7 408 aa13.12□□□□□ -0.31
TTC39A-216ENST00000530004 LINC00114Q6XXX2 140 aa13.12□□□□□ -0.31
TTC39A-216ENST00000530004 NUP54Q7Z3B4 507 aa13.12□□□□□ -0.31
TTC39A-216ENST00000530004 BEST3Q8N1M1 668 aa13.12□□□□□ -0.31
TTC39A-216ENST00000530004 IQCF1Q8N6M8 205 aa13.12□□□□□ -0.31
TTC39A-216ENST00000530004 BPIFB6Q8NFQ5 453 aa13.12□□□□□ -0.31
TTC39A-216ENST00000530004 APH1BQ8WW43 257 aa13.12□□□□□ -0.31
TTC39A-216ENST00000530004 EXTL1Q92935 676 aa13.12□□□□□ -0.31
TTC39A-216ENST00000530004 C3orf49Q96BT1 292 aa13.12□□□□□ -0.31
TTC39A-216ENST00000530004 KLHDC3Q9BQ90 382 aa13.12□□□□□ -0.31
TTC39A-216ENST00000530004 MEPEQ9NQ76 525 aaPredicted RBP13.12□□□□□ -0.31
TTC39A-216ENST00000530004 ZNF226Q9NYT6 803 aa13.12□□□□□ -0.31
TTC39A-216ENST00000530004 BLOC1S6Q9UL45 172 aa13.12□□□□□ -0.31
TTC39A-216ENST00000530004 TMEM5Q9Y2B1 443 aa13.12□□□□□ -0.31
TTC39A-216ENST00000530004 LAMA5O15230 3695 aa13.12□□□□□ -0.31
TTC39A-216ENST00000530004 A0A087WUJ7 227 aa13.11□□□□□ -0.31
TTC39A-216ENST00000530004 M0R129 80 aa13.11□□□□□ -0.31
TTC39A-216ENST00000530004 CDC42EP2O14613 210 aa13.11□□□□□ -0.31
TTC39A-216ENST00000530004 WBP4O75554 376 aaKnown RBP13.11□□□□□ -0.31
TTC39A-216ENST00000530004 FBXO45P0C2W1 286 aa13.11□□□□□ -0.31
TTC39A-216ENST00000530004 CCDC159P0C7I6 412 aa13.11□□□□□ -0.31
TTC39A-216ENST00000530004 MAKP20794 623 aa13.11□□□□□ -0.31
TTC39A-216ENST00000530004 EEF1B2P24534 225 aaKnown RBP13.11□□□□□ -0.31
TTC39A-216ENST00000530004 SOX3P41225 446 aa13.11□□□□□ -0.31
TTC39A-216ENST00000530004 ST13P50502 369 aaKnown RBP13.11□□□□□ -0.31
TTC39A-216ENST00000530004 HLCSP50747 726 aa13.11□□□□□ -0.31
TTC39A-216ENST00000530004 OPN5Q6U736 354 aa13.11□□□□□ -0.31
TTC39A-216ENST00000530004 LINC00696Q6ZRV3 163 aa13.11□□□□□ -0.31
TTC39A-216ENST00000530004 P3H2Q8IVL5 708 aa13.11□□□□□ -0.31
TTC39A-216ENST00000530004 CDK20Q8IZL9 346 aa13.11□□□□□ -0.31
TTC39A-216ENST00000530004 TMEM156Q8N614 296 aa13.11□□□□□ -0.31
TTC39A-216ENST00000530004 RHOXF1Q8NHV9 184 aa13.11□□□□□ -0.31
TTC39A-216ENST00000530004 ZNF563Q8TA94 476 aa13.11□□□□□ -0.31
TTC39A-216ENST00000530004 TEX47Q8TBZ9 253 aa13.11□□□□□ -0.31
TTC39A-216ENST00000530004 ASB15Q8WXK1 588 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms