RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 LZTFL1Q9NQ48 299 aa4.62□□□□□ -1.67
AMBRA1-209ENST00000529963 KCNN3Q9UGI6 736 aa4.62□□□□□ -1.67
AMBRA1-209ENST00000529963 ERVK-11Q9UQG0 969 aa4.62□□□□□ -1.67
AMBRA1-209ENST00000529963 RNF6Q9Y252 685 aa4.62□□□□□ -1.67
AMBRA1-209ENST00000529963 PAM16Q9Y3D7 125 aa4.62□□□□□ -1.67
AMBRA1-209ENST00000529963 MMACHCQ9Y4U1 282 aa4.62□□□□□ -1.67
AMBRA1-209ENST00000529963 CEPT1Q9Y6K0 416 aa4.62□□□□□ -1.67
AMBRA1-209ENST00000529963 INTS1Q8N201 2190 aaKnown RBP4.61□□□□□ -1.67
AMBRA1-209ENST00000529963 NKX2-6A6NCS4 301 aa4.61□□□□□ -1.67
AMBRA1-209ENST00000529963 CLDN4O14493 209 aa4.61□□□□□ -1.67
AMBRA1-209ENST00000529963 DNAJB6O75190 326 aa4.61□□□□□ -1.67
AMBRA1-209ENST00000529963 ZFAND5O76080 213 aa4.61□□□□□ -1.67
AMBRA1-209ENST00000529963 PDE9AO76083 593 aa4.61□□□□□ -1.67
AMBRA1-209ENST00000529963 TPPPO94811 219 aa4.61□□□□□ -1.67
AMBRA1-209ENST00000529963 MYO1DO94832 1006 aa4.61□□□□□ -1.67
AMBRA1-209ENST00000529963 TOXO94900 526 aa4.61□□□□□ -1.67
AMBRA1-209ENST00000529963 NKX2-2O95096 273 aa4.61□□□□□ -1.67
AMBRA1-209ENST00000529963 NDUFB4O95168 129 aa4.61□□□□□ -1.67
AMBRA1-209ENST00000529963 ZWINTO95229 277 aa4.61□□□□□ -1.67
AMBRA1-209ENST00000529963 TTC4O95801 387 aa4.61□□□□□ -1.67
AMBRA1-209ENST00000529963 CH25HO95992 272 aa4.61□□□□□ -1.67
AMBRA1-209ENST00000529963 SERPINA6P08185 405 aa4.61□□□□□ -1.67
AMBRA1-209ENST00000529963 HOXD4P09016 255 aaPredicted RBP4.61□□□□□ -1.67
AMBRA1-209ENST00000529963 CCDC175P0C221 793 aa4.61□□□□□ -1.67
AMBRA1-209ENST00000529963 PGAM1P18669 254 aa4.61□□□□□ -1.67
AMBRA1-209ENST00000529963 ZNF10P21506 573 aaPredicted RBP4.61□□□□□ -1.67
AMBRA1-209ENST00000529963 HNF4AP41235 474 aa4.61□□□□□ -1.67
AMBRA1-209ENST00000529963 RAB8AP61006 207 aa4.61□□□□□ -1.67
AMBRA1-209ENST00000529963 STXBP1P61764 594 aaKnown RBP4.61□□□□□ -1.67
AMBRA1-209ENST00000529963 PPIAP62937 165 aaKnown RBP4.61□□□□□ -1.67
AMBRA1-209ENST00000529963 BTG2P78543 158 aa4.61□□□□□ -1.67
AMBRA1-209ENST00000529963 PLGLB1Q02325 96 aa4.61□□□□□ -1.67
AMBRA1-209ENST00000529963 TFF3Q07654 80 aa4.61□□□□□ -1.67
AMBRA1-209ENST00000529963 MYBPHQ13203 477 aa4.61□□□□□ -1.67
AMBRA1-209ENST00000529963 RBBP5Q15291 538 aaKnown RBP4.61□□□□□ -1.67
AMBRA1-209ENST00000529963 ADIPOQQ15848 244 aa4.61□□□□□ -1.67
AMBRA1-209ENST00000529963 KCTD19Q17RG1 926 aaPredicted RBP4.61□□□□□ -1.67
AMBRA1-209ENST00000529963 PCGF3Q3KNV8 242 aa4.61□□□□□ -1.67
AMBRA1-209ENST00000529963 CXorf66Q5JRM2 361 aaPredicted RBP4.61□□□□□ -1.67
AMBRA1-209ENST00000529963 TOR1AIP1Q5JTV8 583 aa4.61□□□□□ -1.67
AMBRA1-209ENST00000529963 PAPPA-AS1Q5QFB9 102 aa4.61□□□□□ -1.67
AMBRA1-209ENST00000529963 TTC27Q6P3X3 843 aa4.61□□□□□ -1.67
AMBRA1-209ENST00000529963 TMPRSS11BQ86T26 416 aa4.61□□□□□ -1.67
AMBRA1-209ENST00000529963 SLC22A16Q86VW1 577 aa4.61□□□□□ -1.67
AMBRA1-209ENST00000529963 ZC3HC1Q86WB0 502 aaKnown RBP4.61□□□□□ -1.67
AMBRA1-209ENST00000529963 TGIF2LYQ8IUE0 185 aa4.61□□□□□ -1.67
AMBRA1-209ENST00000529963 CLYBLQ8N0X4 340 aa4.61□□□□□ -1.67
AMBRA1-209ENST00000529963 CA13Q8N1Q1 262 aa4.61□□□□□ -1.67
AMBRA1-209ENST00000529963 MARVELD2Q8N4S9 558 aa4.61□□□□□ -1.67
AMBRA1-209ENST00000529963 SCCPDHQ8NBX0 429 aa4.61□□□□□ -1.67
AMBRA1-209ENST00000529963 APCDD1LQ8NCL9 501 aa4.61□□□□□ -1.67
AMBRA1-209ENST00000529963 TTLQ8NG68 377 aa4.61□□□□□ -1.67
AMBRA1-209ENST00000529963 GOT1L1Q8NHS2 421 aaPredicted RBP4.61□□□□□ -1.67
AMBRA1-209ENST00000529963 GRK7Q8WTQ7 553 aa4.61□□□□□ -1.67
AMBRA1-209ENST00000529963 NEIL2Q969S2 332 aa4.61□□□□□ -1.67
AMBRA1-209ENST00000529963 ELMOD3Q96FG2 381 aa4.61□□□□□ -1.67
AMBRA1-209ENST00000529963 TSNARE1Q96NA8 513 aa4.61□□□□□ -1.67
AMBRA1-209ENST00000529963 OR4K3Q96R72 315 aa4.61□□□□□ -1.67
AMBRA1-209ENST00000529963 CSF3RQ99062 836 aa4.61□□□□□ -1.67
AMBRA1-209ENST00000529963 NAP1L3Q99457 506 aaPredicted RBP4.61□□□□□ -1.67
AMBRA1-209ENST00000529963 SRSF8Q9BRL6 282 aaKnown RBP4.61□□□□□ -1.67
AMBRA1-209ENST00000529963 SLC25A33Q9BSK2 321 aa4.61□□□□□ -1.67
AMBRA1-209ENST00000529963 NAT9Q9BTE0 207 aa4.61□□□□□ -1.67
AMBRA1-209ENST00000529963 KCNN2Q9H2S1 579 aa4.61□□□□□ -1.67
AMBRA1-209ENST00000529963 PLK3Q9H4B4 646 aa4.61□□□□□ -1.67
AMBRA1-209ENST00000529963 ESRP2Q9H6T0 727 aaKnown RBP4.61□□□□□ -1.67
AMBRA1-209ENST00000529963 NOX4Q9NPH5 578 aa4.61□□□□□ -1.67
AMBRA1-209ENST00000529963 PNO1Q9NRX1 252 aaKnown RBP4.61□□□□□ -1.67
AMBRA1-209ENST00000529963 HPF1Q9NWY4 346 aa4.61□□□□□ -1.67
AMBRA1-209ENST00000529963 PSD3Q9NYI0 1048 aa4.61□□□□□ -1.67
AMBRA1-209ENST00000529963 MRPS33Q9Y291 106 aaKnown RBP4.61□□□□□ -1.67
AMBRA1-209ENST00000529963 YARS2Q9Y2Z4 477 aaKnown RBP4.61□□□□□ -1.67
AMBRA1-209ENST00000529963 FAM166BA8MTA8 275 aa4.6□□□□□ -1.67
AMBRA1-209ENST00000529963 NPIPA2E9PIF3 369 aa4.6□□□□□ -1.67
AMBRA1-209ENST00000529963 NPIPA3F8WFD2 350 aa4.6□□□□□ -1.67
AMBRA1-209ENST00000529963 BCKDKO14874 412 aa4.6□□□□□ -1.67
AMBRA1-209ENST00000529963 MITFO75030 526 aaPredicted RBP4.6□□□□□ -1.67
AMBRA1-209ENST00000529963 SERPINI2O75830 405 aa4.6□□□□□ -1.67
AMBRA1-209ENST00000529963 BAG2O95816 211 aa4.6□□□□□ -1.67
AMBRA1-209ENST00000529963 GUCA1CO95843 209 aa4.6□□□□□ -1.67
AMBRA1-209ENST00000529963 IFNA16P05015 189 aa4.6□□□□□ -1.67
AMBRA1-209ENST00000529963 NGFRP08138 427 aa4.6□□□□□ -1.67
AMBRA1-209ENST00000529963 SMIM10L1P0DMW3 83 aa4.6□□□□□ -1.67
AMBRA1-209ENST00000529963 ZNF182P17025 639 aaPredicted RBP4.6□□□□□ -1.67
AMBRA1-209ENST00000529963 HPDP32754 393 aaPredicted RBP4.6□□□□□ -1.67
AMBRA1-209ENST00000529963 PNLIPRP2P54317 469 aa4.6□□□□□ -1.67
AMBRA1-209ENST00000529963 CDKN2DP55273 166 aa4.6□□□□□ -1.67
AMBRA1-209ENST00000529963 HSD17B7P56937 341 aa4.6□□□□□ -1.67
AMBRA1-209ENST00000529963 RAB38P57729 211 aa4.6□□□□□ -1.67
AMBRA1-209ENST00000529963 NUP107P57740 925 aa4.6□□□□□ -1.67
AMBRA1-209ENST00000529963 BTN3A2P78410 334 aa4.6□□□□□ -1.67
AMBRA1-209ENST00000529963 FOLH1Q04609 750 aa4.6□□□□□ -1.67
AMBRA1-209ENST00000529963 LTBQ06643 244 aa4.6□□□□□ -1.67
AMBRA1-209ENST00000529963 ACSM2AQ08AH3 577 aa4.6□□□□□ -1.67
AMBRA1-209ENST00000529963 SNTB1Q13884 538 aaKnown RBP4.6□□□□□ -1.67
AMBRA1-209ENST00000529963 RCN2Q14257 317 aa4.6□□□□□ -1.67
AMBRA1-209ENST00000529963 ZNF628Q5EBL2 1059 aa4.6□□□□□ -1.67
AMBRA1-209ENST00000529963 SPANXN3Q5MJ09 141 aa4.6□□□□□ -1.67
AMBRA1-209ENST00000529963 NDUFAF5Q5TEU4 345 aa4.6□□□□□ -1.67
AMBRA1-209ENST00000529963 ACSM2BQ68CK6 577 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms