RNA–Protein interactions for RNA: ENST00000528942.1

CCDC18-210, Transcript of coiled-coil domain containing 18, humanhuman

TSL 4

Gene CCDC18, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-210ENST00000528942 CDK6Q00534 326 aa13.36□□□□□ -0.27
CCDC18-210ENST00000528942 ZNF239Q16600 458 aaKnown RBP13.36□□□□□ -0.27
CCDC18-210ENST00000528942 CYP51A1Q16850 503 aa13.36□□□□□ -0.27
CCDC18-210ENST00000528942 TRMT5Q32P41 509 aaKnown RBP13.36□□□□□ -0.27
CCDC18-210ENST00000528942 TMEM176BQ3YBM2 270 aaPredicted RBP13.36□□□□□ -0.27
CCDC18-210ENST00000528942 REEP3Q6NUK4 255 aa13.36□□□□□ -0.27
CCDC18-210ENST00000528942 KRT73Q86Y46 540 aa13.36□□□□□ -0.27
CCDC18-210ENST00000528942 C10orf111Q8N326 155 aa13.36□□□□□ -0.27
CCDC18-210ENST00000528942 NFKBIDQ8NI38 313 aa13.36□□□□□ -0.27
CCDC18-210ENST00000528942 C10orf82Q8WW14 230 aa13.36□□□□□ -0.27
CCDC18-210ENST00000528942 OSTF1Q92882 214 aa13.36□□□□□ -0.27
CCDC18-210ENST00000528942 GMPPAQ96IJ6 420 aaPredicted RBP13.36□□□□□ -0.27
CCDC18-210ENST00000528942 ANKRD27Q96NW4 1050 aa13.36□□□□□ -0.27
CCDC18-210ENST00000528942 CGREF1Q99674 301 aa13.36□□□□□ -0.27
CCDC18-210ENST00000528942 CCDC106Q9BWC9 280 aa13.36□□□□□ -0.27
CCDC18-210ENST00000528942 TMEM38AQ9H6F2 299 aa13.36□□□□□ -0.27
CCDC18-210ENST00000528942 RLIMQ9NVW2 624 aa13.36□□□□□ -0.27
CCDC18-210ENST00000528942 KCNN3Q9UGI6 736 aa13.36□□□□□ -0.27
CCDC18-210ENST00000528942 CHRNA9Q9UGM1 479 aa13.36□□□□□ -0.27
CCDC18-210ENST00000528942 ZNF232Q9UNY5 417 aa13.36□□□□□ -0.27
CCDC18-210ENST00000528942 EMC9Q9Y3B6 208 aa13.36□□□□□ -0.27
CCDC18-210ENST00000528942 SLC22A2O15244 555 aa13.35□□□□□ -0.27
CCDC18-210ENST00000528942 SMNDC1O75940 238 aaKnown RBP eCLIP13.35□□□□□ -0.27
CCDC18-210ENST00000528942 ETS2P15036 469 aa13.35□□□□□ -0.27
CCDC18-210ENST00000528942 SLC6A2P23975 617 aa13.35□□□□□ -0.27
CCDC18-210ENST00000528942 ADSLP30566 484 aaPredicted RBP13.35□□□□□ -0.27
CCDC18-210ENST00000528942 CPOXP36551 454 aa13.35□□□□□ -0.27
CCDC18-210ENST00000528942 MTPNP58546 118 aa13.35□□□□□ -0.27
CCDC18-210ENST00000528942 SORDQ00796 357 aa13.35□□□□□ -0.27
CCDC18-210ENST00000528942 EPS8Q12929 822 aa13.35□□□□□ -0.27
CCDC18-210ENST00000528942 KLF10Q13118 480 aa13.35□□□□□ -0.27
CCDC18-210ENST00000528942 SCARB2Q14108 478 aa13.35□□□□□ -0.27
CCDC18-210ENST00000528942 GUSBP1Q15486 140 aa13.35□□□□□ -0.27
CCDC18-210ENST00000528942 SYT14P1Q58G82 188 aa13.35□□□□□ -0.27
CCDC18-210ENST00000528942 RUNDC3AQ59EK9 446 aa13.35□□□□□ -0.27
CCDC18-210ENST00000528942 COQ5Q5HYK3 327 aa13.35□□□□□ -0.27
CCDC18-210ENST00000528942 ZNF311Q5JNZ3 666 aa13.35□□□□□ -0.27
CCDC18-210ENST00000528942 VWA1Q6PCB0 445 aa13.35□□□□□ -0.27
CCDC18-210ENST00000528942 FAM214BQ7L5A3 538 aa13.35□□□□□ -0.27
CCDC18-210ENST00000528942 LUZP2Q86TE4 346 aa13.35□□□□□ -0.27
CCDC18-210ENST00000528942 KIF18BQ86Y91 864 aa13.35□□□□□ -0.27
CCDC18-210ENST00000528942 RNF128Q8TEB7 428 aa13.35□□□□□ -0.27
CCDC18-210ENST00000528942 C14orf79Q96F83 325 aa13.35□□□□□ -0.27
CCDC18-210ENST00000528942 OR5B2Q96R09 309 aa13.35□□□□□ -0.27
CCDC18-210ENST00000528942 SPATA5L1Q9BVQ7 753 aa13.35□□□□□ -0.27
CCDC18-210ENST00000528942 SPATA9Q9BWV2 254 aa13.35□□□□□ -0.27
CCDC18-210ENST00000528942 RBM24Q9BX46 236 aaKnown RBP13.35□□□□□ -0.27
CCDC18-210ENST00000528942 SRXN1Q9BYN0 137 aa13.35□□□□□ -0.27
CCDC18-210ENST00000528942 COQ10BQ9H8M1 238 aa13.35□□□□□ -0.27
CCDC18-210ENST00000528942 CTPS2Q9NRF8 586 aa13.35□□□□□ -0.27
CCDC18-210ENST00000528942 GLRX2Q9NS18 164 aa13.35□□□□□ -0.27
CCDC18-210ENST00000528942 GALNT8Q9NY28 637 aa13.35□□□□□ -0.27
CCDC18-210ENST00000528942 CAPN7Q9Y6W3 813 aa13.35□□□□□ -0.27
CCDC18-210ENST00000528942 CSMD2Q7Z408 3487 aa13.35□□□□□ -0.27
CCDC18-210ENST00000528942 CSMD1Q96PZ7 3565 aa13.35□□□□□ -0.27
CCDC18-210ENST00000528942 CACNA1DQ01668 2161 aa13.34□□□□□ -0.27
CCDC18-210ENST00000528942 FBP2O00757 339 aa13.34□□□□□ -0.27
CCDC18-210ENST00000528942 MSTNO14793 375 aa13.34□□□□□ -0.27
CCDC18-210ENST00000528942 SS18L1O75177 396 aaPredicted RBP13.34□□□□□ -0.27
CCDC18-210ENST00000528942 FKBP2P26885 142 aaKnown RBP13.34□□□□□ -0.27
CCDC18-210ENST00000528942 SLC1A3P43003 542 aa13.34□□□□□ -0.27
CCDC18-210ENST00000528942 KIR2DL2P43627 348 aaPredicted RBP13.34□□□□□ -0.27
CCDC18-210ENST00000528942 POLR2HP52434 150 aaKnown RBP13.34□□□□□ -0.27
CCDC18-210ENST00000528942 CTBP2P56545 445 aa13.34□□□□□ -0.27
CCDC18-210ENST00000528942 RAC3P60763 192 aa13.34□□□□□ -0.27
CCDC18-210ENST00000528942 MYBPHQ13203 477 aa13.34□□□□□ -0.27
CCDC18-210ENST00000528942 CAPRIN1Q14444 709 aaKnown RBP13.34□□□□□ -0.27
CCDC18-210ENST00000528942 RNPS1Q15287 305 aaKnown RBP13.34□□□□□ -0.27
CCDC18-210ENST00000528942 ADRM1Q16186 407 aa13.34□□□□□ -0.27
CCDC18-210ENST00000528942 MMEL1Q495T6 779 aa13.34□□□□□ -0.27
CCDC18-210ENST00000528942 ZNF550Q7Z398 422 aa13.34□□□□□ -0.27
CCDC18-210ENST00000528942 C11orf65Q8NCR3 313 aa13.34□□□□□ -0.27
CCDC18-210ENST00000528942 SLC35B4Q969S0 331 aa13.34□□□□□ -0.27
CCDC18-210ENST00000528942 STARD4Q96DR4 205 aa13.34□□□□□ -0.27
CCDC18-210ENST00000528942 NSRP1Q9H0G5 558 aaKnown RBP13.34□□□□□ -0.27
CCDC18-210ENST00000528942 PRDM4Q9UKN5 801 aa13.34□□□□□ -0.27
CCDC18-210ENST00000528942 ANGPT4Q9Y264 503 aa13.34□□□□□ -0.27
CCDC18-210ENST00000528942 HRNRQ86YZ3 2850 aaPredicted RBP13.34□□□□□ -0.27
CCDC18-210ENST00000528942 ANKRD17O75179 2603 aaKnown RBP13.33□□□□□ -0.28
CCDC18-210ENST00000528942 A0A1W2PNR3 127 aa13.33□□□□□ -0.28
CCDC18-210ENST00000528942 PRORSD1PA6NEY8 169 aa13.33□□□□□ -0.28
CCDC18-210ENST00000528942 A8MXE2 369 aa13.33□□□□□ -0.28
CCDC18-210ENST00000528942 DYNC1I1O14576 645 aa13.33□□□□□ -0.28
CCDC18-210ENST00000528942 MRASO14807 208 aa13.33□□□□□ -0.28
CCDC18-210ENST00000528942 GKN3PP0CG01 181 aa13.33□□□□□ -0.28
CCDC18-210ENST00000528942 TFPIP10646 304 aa13.33□□□□□ -0.28
CCDC18-210ENST00000528942 CD8BP10966 210 aa13.33□□□□□ -0.28
CCDC18-210ENST00000528942 PRKAR1BP31321 381 aa13.33□□□□□ -0.28
CCDC18-210ENST00000528942 KIR2DL3P43628 341 aa13.33□□□□□ -0.28
CCDC18-210ENST00000528942 COPZ1P61923 177 aa13.33□□□□□ -0.28
CCDC18-210ENST00000528942 CSNK2A1P68400 391 aaPredicted RBP13.33□□□□□ -0.28
CCDC18-210ENST00000528942 RBBP4Q09028 425 aa13.33□□□□□ -0.28
CCDC18-210ENST00000528942 CYLC2Q14093 348 aaPredicted RBP13.33□□□□□ -0.28
CCDC18-210ENST00000528942 REP15Q6BDI9 236 aa13.33□□□□□ -0.28
CCDC18-210ENST00000528942 GTF2IRD2BQ6EKJ0 949 aa13.33□□□□□ -0.28
CCDC18-210ENST00000528942 FCRLAQ7L513 359 aa13.33□□□□□ -0.28
CCDC18-210ENST00000528942 SPATA21Q7Z572 469 aa13.33□□□□□ -0.28
CCDC18-210ENST00000528942 BTLAQ7Z6A9 289 aa13.33□□□□□ -0.28
CCDC18-210ENST00000528942 GTF2IRD2Q86UP8 949 aa13.33□□□□□ -0.28
CCDC18-210ENST00000528942 SNX32Q86XE0 403 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms