RNA–Protein interactions for RNA: ENST00000528484.5

CMTM1-211, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 726 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-211ENST00000528484 SYT14P1Q58G82 188 aa10.16□□□□□ -0.78
CMTM1-211ENST00000528484 C1QTNF12Q5T7M4 302 aa10.16□□□□□ -0.78
CMTM1-211ENST00000528484 ZYG11AQ6WRX3 759 aa10.16□□□□□ -0.78
CMTM1-211ENST00000528484 SYT10Q6XYQ8 523 aa10.16□□□□□ -0.78
CMTM1-211ENST00000528484 IL17RELQ6ZVW7 336 aa10.16□□□□□ -0.78
CMTM1-211ENST00000528484 MTDHQ86UE4 582 aaKnown RBP10.16□□□□□ -0.78
CMTM1-211ENST00000528484 C17orf78Q8N4C9 275 aa10.16□□□□□ -0.78
CMTM1-211ENST00000528484 RFLNBQ8N5W9 214 aa10.16□□□□□ -0.78
CMTM1-211ENST00000528484 NATD1Q8N6N6 113 aa10.16□□□□□ -0.78
CMTM1-211ENST00000528484 FBXO17Q96EF6 278 aa10.16□□□□□ -0.78
CMTM1-211ENST00000528484 PRPF18Q99633 342 aaKnown RBP10.16□□□□□ -0.78
CMTM1-211ENST00000528484 KLHDC3Q9BQ90 382 aa10.16□□□□□ -0.78
CMTM1-211ENST00000528484 C12orf65Q9H3J6 166 aaKnown RBP10.16□□□□□ -0.78
CMTM1-211ENST00000528484 PSMC3IPQ9P2W1 217 aaPredicted RBP10.16□□□□□ -0.78
CMTM1-211ENST00000528484 ING1Q9UK53 422 aaPredicted RBP10.16□□□□□ -0.78
CMTM1-211ENST00000528484 PYCARDQ9ULZ3 195 aa10.16□□□□□ -0.78
CMTM1-211ENST00000528484 FIS1Q9Y3D6 152 aa10.16□□□□□ -0.78
CMTM1-211ENST00000528484 TRAF6Q9Y4K3 522 aa10.16□□□□□ -0.78
CMTM1-211ENST00000528484 IGKV3D-15A0A087WSY6 115 aa10.15□□□□□ -0.78
CMTM1-211ENST00000528484 LOC390937A0A1W2PQ73 354 aa10.15□□□□□ -0.78
CMTM1-211ENST00000528484 A0A1W2PR80 420 aa10.15□□□□□ -0.78
CMTM1-211ENST00000528484 DUXAA6NLW8 204 aa10.15□□□□□ -0.78
CMTM1-211ENST00000528484 NPIPB8E9PQR5 432 aa10.15□□□□□ -0.78
CMTM1-211ENST00000528484 AZIN1O14977 448 aa10.15□□□□□ -0.78
CMTM1-211ENST00000528484 ANKRD28O15084 1053 aa10.15□□□□□ -0.78
CMTM1-211ENST00000528484 OIP5O43482 229 aa10.15□□□□□ -0.78
CMTM1-211ENST00000528484 DNPH1O43598 174 aa10.15□□□□□ -0.78
CMTM1-211ENST00000528484 WNT11O96014 354 aa10.15□□□□□ -0.78
CMTM1-211ENST00000528484 AK1P00568 194 aa10.15□□□□□ -0.78
CMTM1-211ENST00000528484 TGFAP01135 160 aa10.15□□□□□ -0.78
CMTM1-211ENST00000528484 SRP14P37108 136 aaKnown RBP10.15□□□□□ -0.78
CMTM1-211ENST00000528484 NR4A2P43354 598 aa10.15□□□□□ -0.78
CMTM1-211ENST00000528484 CCT5P48643 541 aa10.15□□□□□ -0.78
CMTM1-211ENST00000528484 CCT3P49368 545 aaKnown RBP10.15□□□□□ -0.78
CMTM1-211ENST00000528484 DNAJB13P59910 316 aa10.15□□□□□ -0.78
CMTM1-211ENST00000528484 RUNX1T1Q06455 604 aa10.15□□□□□ -0.78
CMTM1-211ENST00000528484 PDE7AQ13946 482 aa10.15□□□□□ -0.78
CMTM1-211ENST00000528484 GALNTL6Q49A17 601 aa10.15□□□□□ -0.78
CMTM1-211ENST00000528484 CLEC6AQ6EIG7 209 aa10.15□□□□□ -0.78
CMTM1-211ENST00000528484 ABLIM2Q6H8Q1 611 aa10.15□□□□□ -0.78
CMTM1-211ENST00000528484 CASP12Q6UXS9 341 aa10.15□□□□□ -0.78
CMTM1-211ENST00000528484 B3GLCTQ6Y288 498 aa10.15□□□□□ -0.78
CMTM1-211ENST00000528484 EIF3MQ7L2H7 374 aaKnown RBP10.15□□□□□ -0.78
CMTM1-211ENST00000528484 SLC46A3Q7Z3Q1 461 aa10.15□□□□□ -0.78
CMTM1-211ENST00000528484 C1orf162Q8NEQ5 155 aaPredicted RBP10.15□□□□□ -0.78
CMTM1-211ENST00000528484 ZNF563Q8TA94 476 aa10.15□□□□□ -0.78
CMTM1-211ENST00000528484 OR5P2Q8WZ92 322 aa10.15□□□□□ -0.78
CMTM1-211ENST00000528484 ZNF75CPQ92670 426 aaPredicted RBP10.15□□□□□ -0.78
CMTM1-211ENST00000528484 MSI2Q96DH6 328 aaKnown RBP10.15□□□□□ -0.78
CMTM1-211ENST00000528484 THUMPD3Q9BV44 507 aaKnown RBP10.15□□□□□ -0.78
CMTM1-211ENST00000528484 C1QTNF6Q9BXI9 259 aa10.15□□□□□ -0.78
CMTM1-211ENST00000528484 ANKZF1Q9H8Y5 726 aa10.15□□□□□ -0.78
CMTM1-211ENST00000528484 EML4Q9HC35 981 aaKnown RBP10.15□□□□□ -0.78
CMTM1-211ENST00000528484 PARPBPQ9NWS1 579 aa10.15□□□□□ -0.78
CMTM1-211ENST00000528484 MALT1Q9UDY8 824 aa10.15□□□□□ -0.78
CMTM1-211ENST00000528484 BAIAP2L1Q9UHR4 511 aa10.15□□□□□ -0.78
CMTM1-211ENST00000528484 MID2Q9UJV3 735 aa10.15□□□□□ -0.78
CMTM1-211ENST00000528484 FBXO9Q9UK97 447 aaPredicted RBP10.15□□□□□ -0.78
CMTM1-211ENST00000528484 SERINC4A6NH21 518 aa10.14□□□□□ -0.79
CMTM1-211ENST00000528484 ETV2O00321 342 aaPredicted RBP10.14□□□□□ -0.79
CMTM1-211ENST00000528484 SCAMP2O15127 329 aaKnown RBP10.14□□□□□ -0.79
CMTM1-211ENST00000528484 CFLARO15519 480 aa10.14□□□□□ -0.79
CMTM1-211ENST00000528484 H6PDO95479 791 aa10.14□□□□□ -0.79
CMTM1-211ENST00000528484 CSTAP01040 98 aa10.14□□□□□ -0.79
CMTM1-211ENST00000528484 EFNA1P20827 205 aaPredicted RBP10.14□□□□□ -0.79
CMTM1-211ENST00000528484 PCMT1P22061 227 aa10.14□□□□□ -0.79
CMTM1-211ENST00000528484 EDNRAP25101 427 aa10.14□□□□□ -0.79
CMTM1-211ENST00000528484 APOBEC1P41238 236 aaKnown RBP10.14□□□□□ -0.79
CMTM1-211ENST00000528484 SESN3P58005 492 aa10.14□□□□□ -0.79
CMTM1-211ENST00000528484 SRSF2Q01130 221 aaKnown RBP10.14□□□□□ -0.79
CMTM1-211ENST00000528484 GABRA6Q16445 453 aa10.14□□□□□ -0.79
CMTM1-211ENST00000528484 NDUFAF6Q330K2 333 aa10.14□□□□□ -0.79
CMTM1-211ENST00000528484 EXOSC6Q5RKV6 272 aaKnown RBP10.14□□□□□ -0.79
CMTM1-211ENST00000528484 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.14□□□□□ -0.79
CMTM1-211ENST00000528484 PDZK1Q5T2W1 519 aa10.14□□□□□ -0.79
CMTM1-211ENST00000528484 C12orf54Q6X4T0 127 aa10.14□□□□□ -0.79
CMTM1-211ENST00000528484 TRMT10CQ7L0Y3 403 aaKnown RBP10.14□□□□□ -0.79
CMTM1-211ENST00000528484 DDIASQ8IXT1 998 aa10.14□□□□□ -0.79
CMTM1-211ENST00000528484 SFXN5Q8TD22 340 aa10.14□□□□□ -0.79
CMTM1-211ENST00000528484 FCRL1Q96LA6 429 aa10.14□□□□□ -0.79
CMTM1-211ENST00000528484 MUS81Q96NY9 551 aa10.14□□□□□ -0.79
CMTM1-211ENST00000528484 VRK1Q99986 396 aaPredicted RBP10.14□□□□□ -0.79
CMTM1-211ENST00000528484 NMUR2Q9GZQ4 415 aa10.14□□□□□ -0.79
CMTM1-211ENST00000528484 LAT2Q9GZY6 243 aa10.14□□□□□ -0.79
CMTM1-211ENST00000528484 QRSL1Q9H0R6 528 aaKnown RBP10.14□□□□□ -0.79
CMTM1-211ENST00000528484 SIRT3Q9NTG7 399 aaPredicted RBP10.14□□□□□ -0.79
CMTM1-211ENST00000528484 CHRNA9Q9UGM1 479 aa10.14□□□□□ -0.79
CMTM1-211ENST00000528484 DCTN4Q9UJW0 460 aa10.14□□□□□ -0.79
CMTM1-211ENST00000528484 SLC9A8Q9Y2E8 581 aa10.14□□□□□ -0.79
CMTM1-211ENST00000528484 HDGFL3Q9Y3E1 203 aa10.14□□□□□ -0.79
CMTM1-211ENST00000528484 CCL27Q9Y4X3 112 aa10.14□□□□□ -0.79
CMTM1-211ENST00000528484 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.14□□□□□ -0.79
CMTM1-211ENST00000528484 VSTM5A8MXK1 200 aa10.13□□□□□ -0.79
CMTM1-211ENST00000528484 G3V2L1 256 aa10.13□□□□□ -0.79
CMTM1-211ENST00000528484 EIF1BO60739 113 aaKnown RBP10.13□□□□□ -0.79
CMTM1-211ENST00000528484 STX11O75558 287 aa10.13□□□□□ -0.79
CMTM1-211ENST00000528484 LY6HO94772 140 aa10.13□□□□□ -0.79
CMTM1-211ENST00000528484 SNUPNO95149 360 aaKnown RBP10.13□□□□□ -0.79
CMTM1-211ENST00000528484 PMS2P2O95744 297 aa10.13□□□□□ -0.79
CMTM1-211ENST00000528484 UBTFL6P0CB48 400 aaPredicted RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms