RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 ETFAP13804 333 aa29.46■■■□□ 2.31
SSSCA1-205ENST00000527920 CD1EP15812 388 aa29.46■■■□□ 2.31
SSSCA1-205ENST00000527920 PPP3CBP16298 524 aa29.46■■■□□ 2.31
SSSCA1-205ENST00000527920 CRATP43155 626 aa29.46■■■□□ 2.31
SSSCA1-205ENST00000527920 IST1P53990 364 aa29.46■■■□□ 2.31
SSSCA1-205ENST00000527920 DSTNP60981 165 aa29.46■■■□□ 2.31
SSSCA1-205ENST00000527920 GTDC1Q4AE62 458 aa29.46■■■□□ 2.31
SSSCA1-205ENST00000527920 TMEM201Q5SNT2 666 aa29.46■■■□□ 2.31
SSSCA1-205ENST00000527920 BLOC1S3Q6QNY0 202 aa29.46■■■□□ 2.31
SSSCA1-205ENST00000527920 HMGN2P46Q86SG4 172 aa29.46■■■□□ 2.31
SSSCA1-205ENST00000527920 MAGEB18Q96M61 343 aa29.46■■■□□ 2.31
SSSCA1-205ENST00000527920 PAIP1Q9H074 479 aaKnown RBP29.46■■■□□ 2.31
SSSCA1-205ENST00000527920 LIME1Q9H400 295 aa29.46■■■□□ 2.31
SSSCA1-205ENST00000527920 PLEKHF2Q9H8W4 249 aa29.46■■■□□ 2.31
SSSCA1-205ENST00000527920 KLHL28Q9NXS3 571 aa29.46■■■□□ 2.31
SSSCA1-205ENST00000527920 CHRNA9Q9UGM1 479 aa29.46■■■□□ 2.31
SSSCA1-205ENST00000527920 CELSR1Q9NYQ6 3014 aa29.45■■■□□ 2.31
SSSCA1-205ENST00000527920 ADAM11O75078 769 aa29.45■■■□□ 2.31
SSSCA1-205ENST00000527920 TFPTP0C1Z6 253 aa29.45■■■□□ 2.31
SSSCA1-205ENST00000527920 IL7RP16871 459 aa29.45■■■□□ 2.31
SSSCA1-205ENST00000527920 HOXB9P17482 250 aaPredicted RBP29.45■■■□□ 2.31
SSSCA1-205ENST00000527920 CRYGSP22914 178 aa29.45■■■□□ 2.31
SSSCA1-205ENST00000527920 RYKP34925 604 aa29.45■■■□□ 2.31
SSSCA1-205ENST00000527920 HTR3AP46098 478 aa29.45■■■□□ 2.31
SSSCA1-205ENST00000527920 ATP4BP51164 291 aa29.45■■■□□ 2.31
SSSCA1-205ENST00000527920 CRISP3P54108 245 aa29.45■■■□□ 2.31
SSSCA1-205ENST00000527920 PAMR1Q6UXH9 720 aa29.45■■■□□ 2.31
SSSCA1-205ENST00000527920 AURKBQ96GD4 344 aaPredicted RBP29.45■■■□□ 2.31
SSSCA1-205ENST00000527920 OR5B2Q96R09 309 aa29.45■■■□□ 2.31
SSSCA1-205ENST00000527920 FOXC2Q99958 501 aa29.45■■■□□ 2.31
SSSCA1-205ENST00000527920 OR10A4Q9H209 315 aa29.45■■■□□ 2.31
SSSCA1-205ENST00000527920 RAD21L1Q9H4I0 556 aa29.45■■■□□ 2.31
SSSCA1-205ENST00000527920 BCO1Q9HAY6 547 aa29.45■■■□□ 2.31
SSSCA1-205ENST00000527920 KLHL9Q9P2J3 617 aa29.45■■■□□ 2.31
SSSCA1-205ENST00000527920 PCDHB14Q9Y5E9 798 aa29.45■■■□□ 2.31
SSSCA1-205ENST00000527920 A0A096LPI6 279 aa29.44■■■□□ 2.3
SSSCA1-205ENST00000527920 YES1P07947 543 aa29.44■■■□□ 2.3
SSSCA1-205ENST00000527920 ENPP1P22413 925 aa29.44■■■□□ 2.3
SSSCA1-205ENST00000527920 CLK1P49759 484 aaKnown RBP29.44■■■□□ 2.3
SSSCA1-205ENST00000527920 ART1P52961 327 aa29.44■■■□□ 2.3
SSSCA1-205ENST00000527920 CSNK2A1P68400 391 aaPredicted RBP29.44■■■□□ 2.3
SSSCA1-205ENST00000527920 FADDQ13158 208 aa29.44■■■□□ 2.3
SSSCA1-205ENST00000527920 EXOC3L2Q2M3D2 409 aa29.44■■■□□ 2.3
SSSCA1-205ENST00000527920 MRPL2Q5T653 305 aaKnown RBP29.44■■■□□ 2.3
SSSCA1-205ENST00000527920 TMPPEQ6ZT21 453 aa29.44■■■□□ 2.3
SSSCA1-205ENST00000527920 FUNDC1Q8IVP5 155 aa29.44■■■□□ 2.3
SSSCA1-205ENST00000527920 ZNF440Q8IYI8 595 aa29.44■■■□□ 2.3
SSSCA1-205ENST00000527920 SLC38A5Q8WUX1 472 aa29.44■■■□□ 2.3
SSSCA1-205ENST00000527920 CXXC4Q9H2H0 198 aa29.44■■■□□ 2.3
SSSCA1-205ENST00000527920 CTPS2Q9NRF8 586 aa29.44■■■□□ 2.3
SSSCA1-205ENST00000527920 HIVEP1P15822 2718 aa29.43■■■□□ 2.3
SSSCA1-205ENST00000527920 BMP2P12643 396 aa29.43■■■□□ 2.3
SSSCA1-205ENST00000527920 DNASE1P24855 282 aa29.43■■■□□ 2.3
SSSCA1-205ENST00000527920 ZSWIM7Q19AV6 140 aa29.43■■■□□ 2.3
SSSCA1-205ENST00000527920 LIN52Q52LA3 116 aa29.43■■■□□ 2.3
SSSCA1-205ENST00000527920 LRIF1Q5T3J3 769 aa29.43■■■□□ 2.3
SSSCA1-205ENST00000527920 SLC2A7Q6PXP3 512 aa29.43■■■□□ 2.3
SSSCA1-205ENST00000527920 STAC2Q6ZMT1 411 aa29.43■■■□□ 2.3
SSSCA1-205ENST00000527920 MBD6Q96DN6 1003 aa29.43■■■□□ 2.3
SSSCA1-205ENST00000527920 KLHL4Q9C0H6 718 aa29.43■■■□□ 2.3
SSSCA1-205ENST00000527920 TEP1Q99973 2627 aaKnown RBP29.43■■■□□ 2.3
SSSCA1-205ENST00000527920 TMEM247A6NEH6 219 aa29.42■■■□□ 2.3
SSSCA1-205ENST00000527920 DEFB108AA8MXU0 73 aa29.42■■■□□ 2.3
SSSCA1-205ENST00000527920 SMAD9O15198 467 aaKnown RBP29.42■■■□□ 2.3
SSSCA1-205ENST00000527920 DNPH1O43598 174 aa29.42■■■□□ 2.3
SSSCA1-205ENST00000527920 CYTIPO60759 359 aa29.42■■■□□ 2.3
SSSCA1-205ENST00000527920 BCHEP06276 602 aa29.42■■■□□ 2.3
SSSCA1-205ENST00000527920 UQCRBP14927 111 aa29.42■■■□□ 2.3
SSSCA1-205ENST00000527920 PSMB1P20618 241 aaKnown RBP29.42■■■□□ 2.3
SSSCA1-205ENST00000527920 IDH2P48735 452 aaKnown RBP29.42■■■□□ 2.3
SSSCA1-205ENST00000527920 DIO1P49895 249 aa29.42■■■□□ 2.3
SSSCA1-205ENST00000527920 MAP2K6P52564 334 aa29.42■■■□□ 2.3
SSSCA1-205ENST00000527920 PRAMEF8Q5VWM4 474 aa29.42■■■□□ 2.3
SSSCA1-205ENST00000527920 PRAMEF7Q5VXH5 474 aa29.42■■■□□ 2.3
SSSCA1-205ENST00000527920 TUSC5Q8IXB3 177 aa29.42■■■□□ 2.3
SSSCA1-205ENST00000527920 SPDL1Q96EA4 605 aa29.42■■■□□ 2.3
SSSCA1-205ENST00000527920 PSD2Q9BQI7 771 aa29.42■■■□□ 2.3
SSSCA1-205ENST00000527920 SLC52A3Q9NQ40 469 aa29.42■■■□□ 2.3
SSSCA1-205ENST00000527920 CCM2LQ9NUG4 571 aaPredicted RBP29.42■■■□□ 2.3
SSSCA1-205ENST00000527920 HDGFL3Q9Y3E1 203 aa29.42■■■□□ 2.3
SSSCA1-205ENST00000527920 GMEB1Q9Y692 573 aa29.42■■■□□ 2.3
SSSCA1-205ENST00000527920 CDHR4A6H8M9 788 aa29.41■■■□□ 2.3
SSSCA1-205ENST00000527920 CFAP73A6NFT4 308 aa29.41■■■□□ 2.3
SSSCA1-205ENST00000527920 CLIC1O00299 241 aa29.41■■■□□ 2.3
SSSCA1-205ENST00000527920 RGNQ15493 299 aa29.41■■■□□ 2.3
SSSCA1-205ENST00000527920 RNF220Q5VTB9 566 aa29.41■■■□□ 2.3
SSSCA1-205ENST00000527920 TFAP2EQ6VUC0 442 aa29.41■■■□□ 2.3
SSSCA1-205ENST00000527920 ADGRG3Q86Y34 549 aa29.41■■■□□ 2.3
SSSCA1-205ENST00000527920 OR52P1PQ8NH57 321 aa29.41■■■□□ 2.3
SSSCA1-205ENST00000527920 C12orf49Q9H741 205 aa29.41■■■□□ 2.3
SSSCA1-205ENST00000527920 ING1Q9UK53 422 aaPredicted RBP29.41■■■□□ 2.3
SSSCA1-205ENST00000527920 GPR52Q9Y2T5 361 aa29.41■■■□□ 2.3
SSSCA1-205ENST00000527920 A0A0G2JPF8 293 aa29.4■■■□□ 2.3
SSSCA1-205ENST00000527920 HNRNPCL2B2RXH8 293 aa29.4■■■□□ 2.3
SSSCA1-205ENST00000527920 HNRNPCL3B7ZW38 293 aa29.4■■■□□ 2.3
SSSCA1-205ENST00000527920 SULT2B1O00204 365 aa29.4■■■□□ 2.3
SSSCA1-205ENST00000527920 SIAH2O43255 324 aa29.4■■■□□ 2.3
SSSCA1-205ENST00000527920 HNRNPCL1O60812 293 aaKnown RBP29.4■■■□□ 2.3
SSSCA1-205ENST00000527920 SASH3O75995 380 aa29.4■■■□□ 2.3
SSSCA1-205ENST00000527920 PMS2P2O95744 297 aa29.4■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms