RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 OR5W2Q8NH69 310 aa9.35□□□□□ -0.91
CPSF1-203ENST00000527916 RAB3IL1Q8TBN0 382 aa9.35□□□□□ -0.91
CPSF1-203ENST00000527916 SLC35G5Q96KT7 338 aa9.35□□□□□ -0.91
CPSF1-203ENST00000527916 PPP1R36Q96LQ0 422 aa9.35□□□□□ -0.91
CPSF1-203ENST00000527916 NUF2Q9BZD4 464 aa9.35□□□□□ -0.91
CPSF1-203ENST00000527916 ZNF350Q9GZX5 532 aa9.35□□□□□ -0.91
CPSF1-203ENST00000527916 LAT2Q9GZY6 243 aa9.35□□□□□ -0.91
CPSF1-203ENST00000527916 SAP130Q9H0E3 1048 aa9.35□□□□□ -0.91
CPSF1-203ENST00000527916 SERHL2Q9H4I8 314 aa9.35□□□□□ -0.91
CPSF1-203ENST00000527916 THAP1Q9NVV9 213 aa9.35□□□□□ -0.91
CPSF1-203ENST00000527916 PLCE1Q9P212 2302 aa9.35□□□□□ -0.91
CPSF1-203ENST00000527916 BTNL2Q9UIR0 455 aa9.35□□□□□ -0.91
CPSF1-203ENST00000527916 YLPM1P49750 1951 aaKnown RBP9.35□□□□□ -0.91
CPSF1-203ENST00000527916 TGP01266 2768 aa9.34□□□□□ -0.91
CPSF1-203ENST00000527916 IGHV4-30-2A0A087WSY4 118 aa9.34□□□□□ -0.91
CPSF1-203ENST00000527916 NPIPA5A0A0B4J1W7 369 aa9.34□□□□□ -0.91
CPSF1-203ENST00000527916 SERINC4A6NH21 518 aa9.34□□□□□ -0.91
CPSF1-203ENST00000527916 E9PBE3 544 aa9.34□□□□□ -0.91
CPSF1-203ENST00000527916 NPIPA7E9PJI5 369 aa9.34□□□□□ -0.91
CPSF1-203ENST00000527916 HDAC3O15379 428 aa9.34□□□□□ -0.91
CPSF1-203ENST00000527916 OIP5O43482 229 aa9.34□□□□□ -0.91
CPSF1-203ENST00000527916 FCMRO60667 390 aa9.34□□□□□ -0.91
CPSF1-203ENST00000527916 SNNO75324 88 aaPredicted RBP9.34□□□□□ -0.91
CPSF1-203ENST00000527916 NUDT14O95848 222 aa9.34□□□□□ -0.91
CPSF1-203ENST00000527916 OPN1LWP04000 364 aa9.34□□□□□ -0.91
CPSF1-203ENST00000527916 NPIPA8P0DM63 369 aa9.34□□□□□ -0.91
CPSF1-203ENST00000527916 UBL4AP11441 157 aa9.34□□□□□ -0.91
CPSF1-203ENST00000527916 PSMB1P20618 241 aaKnown RBP9.34□□□□□ -0.91
CPSF1-203ENST00000527916 HNF1AP20823 631 aa9.34□□□□□ -0.91
CPSF1-203ENST00000527916 NUDT6P53370 316 aa9.34□□□□□ -0.91
CPSF1-203ENST00000527916 WDR4P57081 412 aaKnown RBP9.34□□□□□ -0.91
CPSF1-203ENST00000527916 RAC3P60763 192 aa9.34□□□□□ -0.91
CPSF1-203ENST00000527916 TXNL4AP83876 142 aaKnown RBP9.34□□□□□ -0.91
CPSF1-203ENST00000527916 LOXL1Q08397 574 aaPredicted RBP9.34□□□□□ -0.91
CPSF1-203ENST00000527916 FOXF1Q12946 379 aa9.34□□□□□ -0.91
CPSF1-203ENST00000527916 SELENBP1Q13228 472 aa9.34□□□□□ -0.91
CPSF1-203ENST00000527916 CBFBQ13951 182 aa9.34□□□□□ -0.91
CPSF1-203ENST00000527916 RNPS1Q15287 305 aaKnown RBP9.34□□□□□ -0.91
CPSF1-203ENST00000527916 GPR68Q15743 365 aa9.34□□□□□ -0.91
CPSF1-203ENST00000527916 ZNF672Q499Z4 452 aaPredicted RBP9.34□□□□□ -0.91
CPSF1-203ENST00000527916 ATAD3BQ5T9A4 648 aa9.34□□□□□ -0.91
CPSF1-203ENST00000527916 HHATQ5VTY9 493 aa9.34□□□□□ -0.91
CPSF1-203ENST00000527916 SAXO2Q658L1 398 aa9.34□□□□□ -0.91
CPSF1-203ENST00000527916 PPP4R4Q6NUP7 873 aa9.34□□□□□ -0.91
CPSF1-203ENST00000527916 DNAJC14Q6Y2X3 702 aaPredicted RBP9.34□□□□□ -0.91
CPSF1-203ENST00000527916 LILRB1Q8NHL6 650 aaPredicted RBP9.34□□□□□ -0.91
CPSF1-203ENST00000527916 FBXO27Q8NI29 283 aa9.34□□□□□ -0.91
CPSF1-203ENST00000527916 RNF128Q8TEB7 428 aa9.34□□□□□ -0.91
CPSF1-203ENST00000527916 ARL8AQ96BM9 186 aa9.34□□□□□ -0.91
CPSF1-203ENST00000527916 NEURL3Q96EH8 262 aa9.34□□□□□ -0.91
CPSF1-203ENST00000527916 REXO5Q96IC2 774 aaKnown RBP9.34□□□□□ -0.91
CPSF1-203ENST00000527916 ADAD1Q96M93 576 aaKnown RBP9.34□□□□□ -0.91
CPSF1-203ENST00000527916 HDHD5Q9BXW7 423 aa9.34□□□□□ -0.91
CPSF1-203ENST00000527916 GRIP2Q9C0E4 1043 aa9.34□□□□□ -0.91
CPSF1-203ENST00000527916 OR51I1Q9H343 314 aa9.34□□□□□ -0.91
CPSF1-203ENST00000527916 PNPOQ9NVS9 261 aa9.34□□□□□ -0.91
CPSF1-203ENST00000527916 KCNE5Q9UJ90 142 aa9.34□□□□□ -0.91
CPSF1-203ENST00000527916 GDF2Q9UK05 429 aaPredicted RBP9.34□□□□□ -0.91
CPSF1-203ENST00000527916 TENM1Q9UKZ4 2725 aa9.33□□□□□ -0.92
CPSF1-203ENST00000527916 TMEM120BA0PK00 339 aa9.33□□□□□ -0.92
CPSF1-203ENST00000527916 TRPC5OSA6NMA1 111 aa9.33□□□□□ -0.92
CPSF1-203ENST00000527916 SDHDO14521 159 aa9.33□□□□□ -0.92
CPSF1-203ENST00000527916 LMX1BO60663 402 aa9.33□□□□□ -0.92
CPSF1-203ENST00000527916 NDUFS7O75251 213 aa9.33□□□□□ -0.92
CPSF1-203ENST00000527916 UGT2B17O75795 530 aa9.33□□□□□ -0.92
CPSF1-203ENST00000527916 CPSF4O95639 269 aaKnown RBP9.33□□□□□ -0.92
CPSF1-203ENST00000527916 PGRP06401 933 aa9.33□□□□□ -0.92
CPSF1-203ENST00000527916 SLC25A16P16260 332 aa9.33□□□□□ -0.92
CPSF1-203ENST00000527916 FKBP2P26885 142 aaKnown RBP9.33□□□□□ -0.92
CPSF1-203ENST00000527916 S100A3P33764 101 aa9.33□□□□□ -0.92
CPSF1-203ENST00000527916 SFTPDP35247 375 aa9.33□□□□□ -0.92
CPSF1-203ENST00000527916 MAGEA8P43361 318 aa9.33□□□□□ -0.92
CPSF1-203ENST00000527916 RPS26P62854 115 aaKnown RBP9.33□□□□□ -0.92
CPSF1-203ENST00000527916 SRSF2Q01130 221 aaKnown RBP9.33□□□□□ -0.92
CPSF1-203ENST00000527916 SKP2Q13309 424 aa9.33□□□□□ -0.92
CPSF1-203ENST00000527916 QPRTQ15274 297 aa9.33□□□□□ -0.92
CPSF1-203ENST00000527916 TOMM34Q15785 309 aaPredicted RBP9.33□□□□□ -0.92
CPSF1-203ENST00000527916 ZNF239Q16600 458 aaKnown RBP9.33□□□□□ -0.92
CPSF1-203ENST00000527916 TMEM176BQ3YBM2 270 aaPredicted RBP9.33□□□□□ -0.92
CPSF1-203ENST00000527916 SPANXN4Q5MJ08 99 aa9.33□□□□□ -0.92
CPSF1-203ENST00000527916 NCMAPQ5T1S8 102 aa9.33□□□□□ -0.92
CPSF1-203ENST00000527916 PDZK1Q5T2W1 519 aa9.33□□□□□ -0.92
CPSF1-203ENST00000527916 ATG16L1Q676U5 607 aa9.33□□□□□ -0.92
CPSF1-203ENST00000527916 C16orf62Q7Z3J2 963 aa9.33□□□□□ -0.92
CPSF1-203ENST00000527916 ANKRD46Q86W74 232 aa9.33□□□□□ -0.92
CPSF1-203ENST00000527916 SLC43A2Q8N370 569 aa9.33□□□□□ -0.92
CPSF1-203ENST00000527916 TRIML2Q8N7C3 387 aa9.33□□□□□ -0.92
CPSF1-203ENST00000527916 GLB1L3Q8NCI6 653 aaPredicted RBP9.33□□□□□ -0.92
CPSF1-203ENST00000527916 OR10H5Q8NGA6 315 aa9.33□□□□□ -0.92
CPSF1-203ENST00000527916 XAGE5Q8WWM1 108 aa9.33□□□□□ -0.92
CPSF1-203ENST00000527916 TMEM234Q8WY98 164 aa9.33□□□□□ -0.92
CPSF1-203ENST00000527916 ST8SIA1Q92185 356 aa9.33□□□□□ -0.92
CPSF1-203ENST00000527916 PMM1Q92871 262 aa9.33□□□□□ -0.92
CPSF1-203ENST00000527916 ZNF524Q96C55 264 aa9.33□□□□□ -0.92
CPSF1-203ENST00000527916 CCDC115Q96NT0 180 aa9.33□□□□□ -0.92
CPSF1-203ENST00000527916 PAIP2Q9BPZ3 127 aaKnown RBP9.33□□□□□ -0.92
CPSF1-203ENST00000527916 TRAF4Q9BUZ4 470 aaPredicted RBP9.33□□□□□ -0.92
CPSF1-203ENST00000527916 THUMPD3Q9BV44 507 aaKnown RBP9.33□□□□□ -0.92
CPSF1-203ENST00000527916 PLA2G12AQ9BZM1 189 aa9.33□□□□□ -0.92
CPSF1-203ENST00000527916 AIG1Q9NVV5 245 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms