RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 R4GN57 208 aa13.95□□□□□ -0.18
USP47-207ENST00000527733 PRAMEF25A6NGN4 478 aa13.95□□□□□ -0.18
USP47-207ENST00000527733 B4GAT1O43505 415 aa13.95□□□□□ -0.18
USP47-207ENST00000527733 KIAA0513O60268 411 aa13.95□□□□□ -0.18
USP47-207ENST00000527733 FOXD2O60548 495 aaPredicted RBP13.95□□□□□ -0.18
USP47-207ENST00000527733 FCMRO60667 390 aa13.95□□□□□ -0.18
USP47-207ENST00000527733 KDM4BO94953 1096 aa13.95□□□□□ -0.18
USP47-207ENST00000527733 KCNK2O95069 426 aa13.95□□□□□ -0.18
USP47-207ENST00000527733 MSX1P28360 303 aa13.95□□□□□ -0.18
USP47-207ENST00000527733 MRPL19P49406 292 aaKnown RBP13.95□□□□□ -0.18
USP47-207ENST00000527733 SELENOVP59797 346 aa13.95□□□□□ -0.18
USP47-207ENST00000527733 TRA2AQ13595 282 aaKnown RBP eCLIP13.95□□□□□ -0.18
USP47-207ENST00000527733 MOGQ16653 247 aa13.95□□□□□ -0.18
USP47-207ENST00000527733 FAM219BQ5XKK7 198 aa13.95□□□□□ -0.18
USP47-207ENST00000527733 Q6ZPB1 254 aaPredicted RBP13.95□□□□□ -0.18
USP47-207ENST00000527733 LINC00696Q6ZRV3 163 aa13.95□□□□□ -0.18
USP47-207ENST00000527733 CPEB2Q7Z5Q1 589 aaKnown RBP13.95□□□□□ -0.18
USP47-207ENST00000527733 SLC35F2Q8IXU6 374 aa13.95□□□□□ -0.18
USP47-207ENST00000527733 PRR14Q9BWN1 585 aa13.95□□□□□ -0.18
USP47-207ENST00000527733 ACOT13Q9NPJ3 140 aa13.95□□□□□ -0.18
USP47-207ENST00000527733 PCOLCE2Q9UKZ9 415 aa13.95□□□□□ -0.18
USP47-207ENST00000527733 TMED7-TICAM2A0A0A6YYA0 188 aa13.94□□□□□ -0.18
USP47-207ENST00000527733 CHP2O43745 196 aa13.94□□□□□ -0.18
USP47-207ENST00000527733 RAB25P57735 213 aa13.94□□□□□ -0.18
USP47-207ENST00000527733 POU3F1Q03052 451 aaPredicted RBP13.94□□□□□ -0.18
USP47-207ENST00000527733 ZNF425Q6IV72 752 aa13.94□□□□□ -0.18
USP47-207ENST00000527733 MARCH3Q86UD3 253 aa13.94□□□□□ -0.18
USP47-207ENST00000527733 RIMKLAQ8IXN7 391 aa13.94□□□□□ -0.18
USP47-207ENST00000527733 HAVCR2Q8TDQ0 301 aa13.94□□□□□ -0.18
USP47-207ENST00000527733 SLC30A2Q9BRI3 323 aa13.94□□□□□ -0.18
USP47-207ENST00000527733 PCDHB16Q9NRJ7 776 aa13.94□□□□□ -0.18
USP47-207ENST00000527733 AASSQ9UDR5 926 aa13.94□□□□□ -0.18
USP47-207ENST00000527733 TMED7Q9Y3B3 224 aa13.94□□□□□ -0.18
USP47-207ENST00000527733 A0A1W2PPK0 400 aa13.94□□□□□ -0.18
USP47-207ENST00000527733 TBX19O60806 448 aa13.94□□□□□ -0.18
USP47-207ENST00000527733 IGHV4-34P06331 123 aa13.94□□□□□ -0.18
USP47-207ENST00000527733 EIF1P41567 113 aaKnown RBP13.94□□□□□ -0.18
USP47-207ENST00000527733 OR3A3P47888 321 aa13.94□□□□□ -0.18
USP47-207ENST00000527733 OR3A2P47893 321 aa13.94□□□□□ -0.18
USP47-207ENST00000527733 CSNK1A1P48729 337 aa13.94□□□□□ -0.18
USP47-207ENST00000527733 SLC26A5P58743 744 aa13.94□□□□□ -0.18
USP47-207ENST00000527733 EEF1A1P68104 462 aaKnown RBP13.94□□□□□ -0.18
USP47-207ENST00000527733 CBX3Q13185 183 aa13.94□□□□□ -0.18
USP47-207ENST00000527733 SEC23BQ15437 767 aa13.94□□□□□ -0.18
USP47-207ENST00000527733 S100A16Q96FQ6 103 aaKnown RBP13.94□□□□□ -0.18
USP47-207ENST00000527733 TNFRSF13CQ96RJ3 184 aa13.94□□□□□ -0.18
USP47-207ENST00000527733 CCNL2Q96S94 520 aaPredicted RBP13.94□□□□□ -0.18
USP47-207ENST00000527733 ZPBPQ9BS86 351 aa13.94□□□□□ -0.18
USP47-207ENST00000527733 MED17Q9NVC6 651 aa13.94□□□□□ -0.18
USP47-207ENST00000527733 ZNF222Q9UK12 451 aa13.94□□□□□ -0.18
USP47-207ENST00000527733 PCDHGB6Q9Y5F9 930 aa13.94□□□□□ -0.18
USP47-207ENST00000527733 OR6C76A6NM76 312 aa13.94□□□□□ -0.18
USP47-207ENST00000527733 TNFRSF21O75509 655 aa13.94□□□□□ -0.18
USP47-207ENST00000527733 F13BP05160 661 aa13.94□□□□□ -0.18
USP47-207ENST00000527733 CRHBPP24387 322 aa13.94□□□□□ -0.18
USP47-207ENST00000527733 CYB561P49447 251 aa13.94□□□□□ -0.18
USP47-207ENST00000527733 PRKXP51817 358 aa13.94□□□□□ -0.18
USP47-207ENST00000527733 RAE1P78406 368 aaKnown RBP13.94□□□□□ -0.18
USP47-207ENST00000527733 PIWIL3Q7Z3Z3 882 aaKnown RBP13.94□□□□□ -0.18
USP47-207ENST00000527733 PTOV1Q86YD1 416 aa13.94□□□□□ -0.18
USP47-207ENST00000527733 RBM45Q8IUH3 476 aaKnown RBP13.94□□□□□ -0.18
USP47-207ENST00000527733 SPARTQ8N0X7 666 aa13.94□□□□□ -0.18
USP47-207ENST00000527733 LSM14AQ8ND56 463 aaKnown RBP13.94□□□□□ -0.18
USP47-207ENST00000527733 INTS14Q96SY0 518 aa13.94□□□□□ -0.18
USP47-207ENST00000527733 LHPPQ9H008 270 aa13.94□□□□□ -0.18
USP47-207ENST00000527733 CDCP1Q9H5V8 836 aa13.94□□□□□ -0.18
USP47-207ENST00000527733 TRAV36DV7A0A075B6V5 113 aa13.94□□□□□ -0.18
USP47-207ENST00000527733 G3V3Y1 287 aa13.94□□□□□ -0.18
USP47-207ENST00000527733 SLC16A7O60669 478 aa13.94□□□□□ -0.18
USP47-207ENST00000527733 SOD1P00441 154 aa13.94□□□□□ -0.18
USP47-207ENST00000527733 TFPTP0C1Z6 253 aa13.94□□□□□ -0.18
USP47-207ENST00000527733 DUSP8Q13202 625 aa13.94□□□□□ -0.18
USP47-207ENST00000527733 MEPCEQ7L2J0 689 aaKnown RBP13.94□□□□□ -0.18
USP47-207ENST00000527733 C8orf44Q96CB5 159 aa13.94□□□□□ -0.18
USP47-207ENST00000527733 HRASLS5Q96KN8 279 aa13.94□□□□□ -0.18
USP47-207ENST00000527733 IP6K3Q96PC2 410 aa13.94□□□□□ -0.18
USP47-207ENST00000527733 PALMDQ9NP74 551 aa13.94□□□□□ -0.18
USP47-207ENST00000527733 CD8B2A6NJW9 211 aa13.93□□□□□ -0.18
USP47-207ENST00000527733 P2RX6O15547 441 aa13.93□□□□□ -0.18
USP47-207ENST00000527733 GYPBP06028 91 aa13.93□□□□□ -0.18
USP47-207ENST00000527733 CDK1P06493 297 aa13.93□□□□□ -0.18
USP47-207ENST00000527733 CD8BP10966 210 aa13.93□□□□□ -0.18
USP47-207ENST00000527733 FPR3P25089 353 aa13.93□□□□□ -0.18
USP47-207ENST00000527733 UBE2NP61088 152 aaKnown RBP13.93□□□□□ -0.18
USP47-207ENST00000527733 MLC1Q15049 377 aa13.93□□□□□ -0.18
USP47-207ENST00000527733 VN1R4Q7Z5H5 301 aa13.93□□□□□ -0.18
USP47-207ENST00000527733 BCORP1Q8N888 145 aa13.93□□□□□ -0.18
USP47-207ENST00000527733 TMEM255BQ8WV15 326 aa13.93□□□□□ -0.18
USP47-207ENST00000527733 KATNB1Q9BVA0 655 aa13.93□□□□□ -0.18
USP47-207ENST00000527733 CORINQ9Y5Q5 1042 aa13.93□□□□□ -0.18
USP47-207ENST00000527733 RALGAPA2Q2PPJ7 1873 aa13.93□□□□□ -0.18
USP47-207ENST00000527733 CHRM4P08173 479 aa13.93□□□□□ -0.18
USP47-207ENST00000527733 PHC1P78364 1004 aa13.93□□□□□ -0.18
USP47-207ENST00000527733 ZNF91Q05481 1191 aa13.93□□□□□ -0.18
USP47-207ENST00000527733 SLC7A13Q8TCU3 470 aa13.93□□□□□ -0.18
USP47-207ENST00000527733 ING3Q9NXR8 418 aa13.93□□□□□ -0.18
USP47-207ENST00000527733 ARID1BQ8NFD5 2236 aaPredicted RBP13.93□□□□□ -0.18
USP47-207ENST00000527733 RGS9O75916 674 aaPredicted RBP13.93□□□□□ -0.18
USP47-207ENST00000527733 GOT1L1Q8NHS2 421 aaPredicted RBP13.93□□□□□ -0.18
USP47-207ENST00000527733 CHST8Q9H2A9 424 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms