RNA–Protein interactions for RNA: ENST00000527469.1

CAPN1-209, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-209ENST00000527469 SCARB2Q14108 478 aa12□□□□□ -0.49
CAPN1-209ENST00000527469 MAPK11Q15759 364 aa12□□□□□ -0.49
CAPN1-209ENST00000527469 CTU2Q2VPK5 515 aaKnown RBP12□□□□□ -0.49
CAPN1-209ENST00000527469 TRMT5Q32P41 509 aaKnown RBP12□□□□□ -0.49
CAPN1-209ENST00000527469 RUNDC3AQ59EK9 446 aa12□□□□□ -0.49
CAPN1-209ENST00000527469 RNF220Q5VTB9 566 aa12□□□□□ -0.49
CAPN1-209ENST00000527469 DLEU7Q6UYE1 221 aa12□□□□□ -0.49
CAPN1-209ENST00000527469 DMRTC2Q8IXT2 367 aaPredicted RBP12□□□□□ -0.49
CAPN1-209ENST00000527469 CADM2Q8N3J6 435 aa12□□□□□ -0.49
CAPN1-209ENST00000527469 PCYOX1LQ8NBM8 494 aa12□□□□□ -0.49
CAPN1-209ENST00000527469 C11orf65Q8NCR3 313 aa12□□□□□ -0.49
CAPN1-209ENST00000527469 ZHX1-C8orf76Q96EF9 292 aa12□□□□□ -0.49
CAPN1-209ENST00000527469 GMPPAQ96IJ6 420 aaPredicted RBP12□□□□□ -0.49
CAPN1-209ENST00000527469 ADGRG7Q96K78 797 aa12□□□□□ -0.49
CAPN1-209ENST00000527469 ANKRD27Q96NW4 1050 aa12□□□□□ -0.49
CAPN1-209ENST00000527469 SH3GL1Q99961 368 aa12□□□□□ -0.49
CAPN1-209ENST00000527469 ZNF559Q9BR84 538 aa12□□□□□ -0.49
CAPN1-209ENST00000527469 CPPED1Q9BRF8 314 aaPredicted RBP12□□□□□ -0.49
CAPN1-209ENST00000527469 SPATA9Q9BWV2 254 aa12□□□□□ -0.49
CAPN1-209ENST00000527469 TRIM8Q9BZR9 551 aa12□□□□□ -0.49
CAPN1-209ENST00000527469 BCL2L10Q9HD36 194 aa12□□□□□ -0.49
CAPN1-209ENST00000527469 SAR1AQ9NR31 198 aa12□□□□□ -0.49
CAPN1-209ENST00000527469 CTPS2Q9NRF8 586 aa12□□□□□ -0.49
CAPN1-209ENST00000527469 GLRX2Q9NS18 164 aa12□□□□□ -0.49
CAPN1-209ENST00000527469 RLIMQ9NVW2 624 aa12□□□□□ -0.49
CAPN1-209ENST00000527469 CHRNA9Q9UGM1 479 aa12□□□□□ -0.49
CAPN1-209ENST00000527469 CLEC4AQ9UMR7 237 aa12□□□□□ -0.49
CAPN1-209ENST00000527469 PROCRQ9UNN8 238 aa12□□□□□ -0.49
CAPN1-209ENST00000527469 CACNA1DQ01668 2161 aa11.99□□□□□ -0.49
CAPN1-209ENST00000527469 ADGRG4Q8IZF6 3080 aa11.99□□□□□ -0.49
CAPN1-209ENST00000527469 TRBV5-3A0A0A0MS03 114 aa11.99□□□□□ -0.49
CAPN1-209ENST00000527469 LOC100653049A0A140TA62 436 aa11.99□□□□□ -0.49
CAPN1-209ENST00000527469 A0A1W2PNR3 127 aa11.99□□□□□ -0.49
CAPN1-209ENST00000527469 PRORSD1PA6NEY8 169 aa11.99□□□□□ -0.49
CAPN1-209ENST00000527469 BBIP1A8MTZ0 92 aa11.99□□□□□ -0.49
CAPN1-209ENST00000527469 SULT2B1O00204 365 aa11.99□□□□□ -0.49
CAPN1-209ENST00000527469 DYNC1I1O14576 645 aa11.99□□□□□ -0.49
CAPN1-209ENST00000527469 AP3D1O14617 1153 aa11.99□□□□□ -0.49
CAPN1-209ENST00000527469 MSTNO14793 375 aa11.99□□□□□ -0.49
CAPN1-209ENST00000527469 MRASO14807 208 aa11.99□□□□□ -0.49
CAPN1-209ENST00000527469 EFNA2O43921 213 aa11.99□□□□□ -0.49
CAPN1-209ENST00000527469 CCDC22O60826 627 aa11.99□□□□□ -0.49
CAPN1-209ENST00000527469 SERPINB7O75635 380 aa11.99□□□□□ -0.49
CAPN1-209ENST00000527469 TNFSF13O75888 250 aa11.99□□□□□ -0.49
CAPN1-209ENST00000527469 KRT34O76011 436 aa11.99□□□□□ -0.49
CAPN1-209ENST00000527469 AQP8O94778 261 aa11.99□□□□□ -0.49
CAPN1-209ENST00000527469 GKN3PP0CG01 181 aa11.99□□□□□ -0.49
CAPN1-209ENST00000527469 ETS2P15036 469 aa11.99□□□□□ -0.49
CAPN1-209ENST00000527469 GPX2P18283 190 aa11.99□□□□□ -0.49
CAPN1-209ENST00000527469 CXCR1P25024 350 aa11.99□□□□□ -0.49
CAPN1-209ENST00000527469 AQP1P29972 269 aa11.99□□□□□ -0.49
CAPN1-209ENST00000527469 SLC1A3P43003 542 aa11.99□□□□□ -0.49
CAPN1-209ENST00000527469 EPS8Q12929 822 aa11.99□□□□□ -0.49
CAPN1-209ENST00000527469 CAPRIN1Q14444 709 aaKnown RBP11.99□□□□□ -0.49
CAPN1-209ENST00000527469 RNPS1Q15287 305 aaKnown RBP11.99□□□□□ -0.49
CAPN1-209ENST00000527469 ZNF239Q16600 458 aaKnown RBP11.99□□□□□ -0.49
CAPN1-209ENST00000527469 FBXL19-AS1Q494R0 122 aa11.99□□□□□ -0.49
CAPN1-209ENST00000527469 SYT14P1Q58G82 188 aa11.99□□□□□ -0.49
CAPN1-209ENST00000527469 TMEM201Q5SNT2 666 aa11.99□□□□□ -0.49
CAPN1-209ENST00000527469 FCRLAQ7L513 359 aa11.99□□□□□ -0.49
CAPN1-209ENST00000527469 FAM214BQ7L5A3 538 aa11.99□□□□□ -0.49
CAPN1-209ENST00000527469 CPLX4Q7Z7G2 160 aa11.99□□□□□ -0.49
CAPN1-209ENST00000527469 STK32CQ86UX6 486 aa11.99□□□□□ -0.49
CAPN1-209ENST00000527469 RETREG3Q86VR2 466 aa11.99□□□□□ -0.49
CAPN1-209ENST00000527469 SNX32Q86XE0 403 aa11.99□□□□□ -0.49
CAPN1-209ENST00000527469 HIPK4Q8NE63 616 aa11.99□□□□□ -0.49
CAPN1-209ENST00000527469 ROBO4Q8WZ75 1007 aa11.99□□□□□ -0.49
CAPN1-209ENST00000527469 DDIT4LQ96D03 193 aa11.99□□□□□ -0.49
CAPN1-209ENST00000527469 ZNF317Q96PQ6 595 aaPredicted RBP11.99□□□□□ -0.49
CAPN1-209ENST00000527469 SLC39A3Q9BRY0 314 aa11.99□□□□□ -0.49
CAPN1-209ENST00000527469 IKZF5Q9H5V7 419 aa11.99□□□□□ -0.49
CAPN1-209ENST00000527469 TMEM38AQ9H6F2 299 aa11.99□□□□□ -0.49
CAPN1-209ENST00000527469 FANCFQ9NPI8 374 aa11.99□□□□□ -0.49
CAPN1-209ENST00000527469 GID8Q9NWU2 228 aa11.99□□□□□ -0.49
CAPN1-209ENST00000527469 KLHL28Q9NXS3 571 aa11.99□□□□□ -0.49
CAPN1-209ENST00000527469 RPS6KB2Q9UBS0 482 aa11.99□□□□□ -0.49
CAPN1-209ENST00000527469 KCNN3Q9UGI6 736 aa11.99□□□□□ -0.49
CAPN1-209ENST00000527469 GMEB1Q9Y692 573 aa11.99□□□□□ -0.49
CAPN1-209ENST00000527469 HEATR5AQ86XA9 2040 aa11.99□□□□□ -0.49
CAPN1-209ENST00000527469 MED12LQ86YW9 2145 aa11.99□□□□□ -0.49
CAPN1-209ENST00000527469 TMED7-TICAM2A0A0A6YYA0 188 aa11.98□□□□□ -0.49
CAPN1-209ENST00000527469 TUBAL3A6NHL2 446 aa11.98□□□□□ -0.49
CAPN1-209ENST00000527469 CYSRT1A8MQ03 144 aa11.98□□□□□ -0.49
CAPN1-209ENST00000527469 FAAHO00519 579 aa11.98□□□□□ -0.49
CAPN1-209ENST00000527469 SLC22A2O15244 555 aa11.98□□□□□ -0.49
CAPN1-209ENST00000527469 PRKD3O94806 890 aa11.98□□□□□ -0.49
CAPN1-209ENST00000527469 IGFBP2P18065 325 aa11.98□□□□□ -0.49
CAPN1-209ENST00000527469 ENPP1P22413 925 aa11.98□□□□□ -0.49
CAPN1-209ENST00000527469 TACR3P29371 465 aa11.98□□□□□ -0.49
CAPN1-209ENST00000527469 ADSLP30566 484 aaPredicted RBP11.98□□□□□ -0.49
CAPN1-209ENST00000527469 DLX5P56178 289 aa11.98□□□□□ -0.49
CAPN1-209ENST00000527469 RAC3P60763 192 aa11.98□□□□□ -0.49
CAPN1-209ENST00000527469 NCALDP61601 193 aa11.98□□□□□ -0.49
CAPN1-209ENST00000527469 TLE4Q04727 773 aa11.98□□□□□ -0.49
CAPN1-209ENST00000527469 RBBP4Q09028 425 aa11.98□□□□□ -0.49
CAPN1-209ENST00000527469 SNTB1Q13884 538 aaKnown RBP11.98□□□□□ -0.49
CAPN1-209ENST00000527469 COQ5Q5HYK3 327 aa11.98□□□□□ -0.49
CAPN1-209ENST00000527469 WBP2NLQ6ICG8 309 aa11.98□□□□□ -0.49
CAPN1-209ENST00000527469 VWA1Q6PCB0 445 aa11.98□□□□□ -0.49
CAPN1-209ENST00000527469 SPATA21Q7Z572 469 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms