RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 MPDZO75970 2070 aa16.17■□□□□ 0.18
USH1C-205ENST00000527020 A0A1W2PPC4 97 aa16.17■□□□□ 0.18
USH1C-205ENST00000527020 MT-ND5P03915 603 aa16.17■□□□□ 0.18
USH1C-205ENST00000527020 CSF2P04141 144 aa16.17■□□□□ 0.18
USH1C-205ENST00000527020 SLC2A2P11168 524 aaPredicted RBP16.17■□□□□ 0.18
USH1C-205ENST00000527020 SHC1P29353 583 aa16.17■□□□□ 0.18
USH1C-205ENST00000527020 GPR3P46089 330 aa16.17■□□□□ 0.18
USH1C-205ENST00000527020 ZNF267Q14586 743 aaPredicted RBP16.17■□□□□ 0.18
USH1C-205ENST00000527020 NNATQ16517 81 aa16.17■□□□□ 0.18
USH1C-205ENST00000527020 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.17■□□□□ 0.18
USH1C-205ENST00000527020 LCN1P1Q5VSP4 162 aa16.17■□□□□ 0.18
USH1C-205ENST00000527020 FAAH2Q6GMR7 532 aa16.17■□□□□ 0.18
USH1C-205ENST00000527020 VASH1Q7L8A9 365 aaPredicted RBP16.17■□□□□ 0.18
USH1C-205ENST00000527020 UBE2J2Q8N2K1 259 aa16.17■□□□□ 0.18
USH1C-205ENST00000527020 CADM2Q8N3J6 435 aa16.17■□□□□ 0.18
USH1C-205ENST00000527020 RFLNBQ8N5W9 214 aa16.17■□□□□ 0.18
USH1C-205ENST00000527020 FAM160A2Q8N612 972 aaPredicted RBP16.17■□□□□ 0.18
USH1C-205ENST00000527020 SMPDL3BQ92485 455 aa16.17■□□□□ 0.18
USH1C-205ENST00000527020 RBM18Q96H35 190 aaKnown RBP16.17■□□□□ 0.18
USH1C-205ENST00000527020 ZNF486Q96H40 463 aaPredicted RBP16.17■□□□□ 0.18
USH1C-205ENST00000527020 C4orf36Q96KX1 117 aa16.17■□□□□ 0.18
USH1C-205ENST00000527020 NDC1Q9BTX1 674 aa16.17■□□□□ 0.18
USH1C-205ENST00000527020 ERVMER34-1Q9H9K5 563 aa16.17■□□□□ 0.18
USH1C-205ENST00000527020 LRIT1Q9P2V4 623 aa16.17■□□□□ 0.18
USH1C-205ENST00000527020 CHRNA9Q9UGM1 479 aa16.17■□□□□ 0.18
USH1C-205ENST00000527020 SERTAD3Q9UJW9 196 aa16.17■□□□□ 0.18
USH1C-205ENST00000527020 GNB5O14775 395 aa16.16■□□□□ 0.18
USH1C-205ENST00000527020 PTBP1P26599 531 aaKnown RBP eCLIP16.16■□□□□ 0.18
USH1C-205ENST00000527020 SLC6A6P31641 620 aa16.16■□□□□ 0.18
USH1C-205ENST00000527020 OR12D2P58182 307 aa16.16■□□□□ 0.18
USH1C-205ENST00000527020 IL18Q14116 193 aa16.16■□□□□ 0.18
USH1C-205ENST00000527020 BCL2A1Q16548 175 aa16.16■□□□□ 0.18
USH1C-205ENST00000527020 MZT2AQ6P582 158 aa16.16■□□□□ 0.18
USH1C-205ENST00000527020 RPTNQ6XPR3 784 aa16.16■□□□□ 0.18
USH1C-205ENST00000527020 ZNF595Q8IYB9 648 aa16.16■□□□□ 0.18
USH1C-205ENST00000527020 OR5M3Q8NGP4 307 aa16.16■□□□□ 0.18
USH1C-205ENST00000527020 KLHDC7BQ96G42 594 aa16.16■□□□□ 0.18
USH1C-205ENST00000527020 PGLYRP3Q96LB9 341 aa16.16■□□□□ 0.18
USH1C-205ENST00000527020 N6AMT1Q9Y5N5 214 aa16.16■□□□□ 0.18
USH1C-205ENST00000527020 J3QLW9 94 aa16.16■□□□□ 0.18
USH1C-205ENST00000527020 SRPX2O60687 465 aaPredicted RBP16.16■□□□□ 0.18
USH1C-205ENST00000527020 SC5DO75845 299 aa16.16■□□□□ 0.18
USH1C-205ENST00000527020 ZNF19P17023 458 aa16.16■□□□□ 0.18
USH1C-205ENST00000527020 CD53P19397 219 aa16.16■□□□□ 0.18
USH1C-205ENST00000527020 ELK1P19419 428 aa16.16■□□□□ 0.18
USH1C-205ENST00000527020 MAOAP21397 527 aa16.16■□□□□ 0.18
USH1C-205ENST00000527020 THBS2P35442 1172 aa16.16■□□□□ 0.18
USH1C-205ENST00000527020 GABRA4P48169 554 aa16.16■□□□□ 0.18
USH1C-205ENST00000527020 ATP12AP54707 1039 aa16.16■□□□□ 0.18
USH1C-205ENST00000527020 ARHGAP11AQ6P4F7 1023 aa16.16■□□□□ 0.18
USH1C-205ENST00000527020 ULK3Q6PHR2 472 aa16.16■□□□□ 0.18
USH1C-205ENST00000527020 TRILQ7L0X0 811 aa16.16■□□□□ 0.18
USH1C-205ENST00000527020 GPALPP1Q8IXQ4 340 aa16.16■□□□□ 0.18
USH1C-205ENST00000527020 C16orf52Q8NHV5 167 aa16.16■□□□□ 0.18
USH1C-205ENST00000527020 SLC2A12Q8TD20 617 aa16.16■□□□□ 0.18
USH1C-205ENST00000527020 SLC35B4Q969S0 331 aa16.16■□□□□ 0.18
USH1C-205ENST00000527020 ERMAPQ96PL5 475 aaPredicted RBP16.16■□□□□ 0.18
USH1C-205ENST00000527020 TMEM43Q9BTV4 400 aa16.16■□□□□ 0.18
USH1C-205ENST00000527020 MOV10Q9HCE1 1003 aaKnown RBP16.16■□□□□ 0.18
USH1C-205ENST00000527020 PRTFDC1Q9NRG1 225 aa16.16■□□□□ 0.18
USH1C-205ENST00000527020 TMEM184BQ9Y519 407 aaPredicted RBP16.16■□□□□ 0.18
USH1C-205ENST00000527020 PCDHGB7Q9Y5F8 929 aa16.16■□□□□ 0.18
USH1C-205ENST00000527020 HMX3A6NHT5 357 aa16.15■□□□□ 0.18
USH1C-205ENST00000527020 A8MV72 311 aaPredicted RBP16.15■□□□□ 0.18
USH1C-205ENST00000527020 AGRPO00253 132 aa16.15■□□□□ 0.18
USH1C-205ENST00000527020 PRAMEF2O60811 474 aa16.15■□□□□ 0.18
USH1C-205ENST00000527020 CLPSP04118 112 aa16.15■□□□□ 0.18
USH1C-205ENST00000527020 FAM157BP0CG42 384 aa16.15■□□□□ 0.18
USH1C-205ENST00000527020 DDOSTP39656 456 aa16.15■□□□□ 0.18
USH1C-205ENST00000527020 BLKP51451 505 aa16.15■□□□□ 0.18
USH1C-205ENST00000527020 SLC3A1Q07837 685 aa16.15■□□□□ 0.18
USH1C-205ENST00000527020 SF3B4Q15427 424 aaKnown RBP eCLIP16.15■□□□□ 0.18
USH1C-205ENST00000527020 IDNKQ5T6J7 187 aa16.15■□□□□ 0.18
USH1C-205ENST00000527020 HBMQ6B0K9 141 aa16.15■□□□□ 0.18
USH1C-205ENST00000527020 ZNF550Q7Z398 422 aa16.15■□□□□ 0.18
USH1C-205ENST00000527020 ARL14Q8N4G2 192 aa16.15■□□□□ 0.18
USH1C-205ENST00000527020 LRRC17Q8N6Y2 441 aa16.15■□□□□ 0.18
USH1C-205ENST00000527020 OR52E2Q8NGJ4 325 aa16.15■□□□□ 0.18
USH1C-205ENST00000527020 OR5J2Q8NH18 312 aa16.15■□□□□ 0.18
USH1C-205ENST00000527020 OR4C3Q8NH37 302 aa16.15■□□□□ 0.18
USH1C-205ENST00000527020 RLN3Q8WXF3 142 aa16.15■□□□□ 0.18
USH1C-205ENST00000527020 RNF121Q9H920 327 aa16.15■□□□□ 0.18
USH1C-205ENST00000527020 ERVK-19Q9WJR5 959 aa16.15■□□□□ 0.18
USH1C-205ENST00000527020 MCIDASD6RGH6 385 aa16.14■□□□□ 0.17
USH1C-205ENST00000527020 LRRN3E7EW58 273 aa16.14■□□□□ 0.17
USH1C-205ENST00000527020 NSA2O95478 260 aaKnown RBP16.14■□□□□ 0.17
USH1C-205ENST00000527020 TFP02787 698 aa16.14■□□□□ 0.17
USH1C-205ENST00000527020 KRT8P05787 483 aa16.14■□□□□ 0.17
USH1C-205ENST00000527020 HIST1H1CP16403 213 aaKnown RBP16.14■□□□□ 0.17
USH1C-205ENST00000527020 F8A1P23610 371 aa16.14■□□□□ 0.17
USH1C-205ENST00000527020 HCCSP53701 268 aa16.14■□□□□ 0.17
USH1C-205ENST00000527020 FUT7Q11130 342 aa16.14■□□□□ 0.17
USH1C-205ENST00000527020 DMKNQ6E0U4 476 aaPredicted RBP16.14■□□□□ 0.17
USH1C-205ENST00000527020 PXKQ7Z7A4 578 aa16.14■□□□□ 0.17
USH1C-205ENST00000527020 GLCCI1Q86VQ1 547 aa16.14■□□□□ 0.17
USH1C-205ENST00000527020 SLC43A2Q8N370 569 aa16.14■□□□□ 0.17
USH1C-205ENST00000527020 BCORP1Q8N888 145 aa16.14■□□□□ 0.17
USH1C-205ENST00000527020 ZSCAN1Q8NBB4 408 aa16.14■□□□□ 0.17
USH1C-205ENST00000527020 SDR9C7Q8NEX9 313 aa16.14■□□□□ 0.17
USH1C-205ENST00000527020 ABHD4Q8TB40 342 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms