RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 SOHLH2Q9NX45 425 aa1.06□□□□□ -2.24
ECHDC1-219ENST00000526299 NINJ2Q9NZG7 142 aa1.06□□□□□ -2.24
ECHDC1-219ENST00000526299 OR1A1Q9P1Q5 309 aa1.06□□□□□ -2.24
ECHDC1-219ENST00000526299 GHRLQ9UBU3 117 aa1.06□□□□□ -2.24
ECHDC1-219ENST00000526299 OPN4Q9UHM6 478 aa1.06□□□□□ -2.24
ECHDC1-219ENST00000526299 CYTH4Q9UIA0 394 aa1.06□□□□□ -2.24
ECHDC1-219ENST00000526299 RABL2BQ9UNT1 228 aa1.06□□□□□ -2.24
ECHDC1-219ENST00000526299 FOXJ3Q9UPW0 622 aa1.06□□□□□ -2.24
ECHDC1-219ENST00000526299 AP4B1Q9Y6B7 739 aa1.06□□□□□ -2.24
ECHDC1-219ENST00000526299 SPACA6W5XKT8 324 aa1.06□□□□□ -2.24
ECHDC1-219ENST00000526299 KIF16BQ96L93 1317 aa1.06□□□□□ -2.24
ECHDC1-219ENST00000526299 GPR179Q6PRD1 2367 aa1.06□□□□□ -2.24
ECHDC1-219ENST00000526299 NID2Q14112 1375 aa1.06□□□□□ -2.24
ECHDC1-219ENST00000526299 CCDC7Q96M83 1385 aa1.06□□□□□ -2.24
ECHDC1-219ENST00000526299 PPIAL4CA0A0B4J2A2 164 aa1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 IGHV3-64DA0A0J9YX35 117 aa1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 SMIM28A0A1B0GU29 152 aa1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 A0A1W2PNV4 684 aa1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 PCP4L1A6NKN8 68 aa1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 JAK2O60674 1132 aa1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 UGT2B17O75795 530 aa1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 IGSF6O95976 241 aa1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 AK1P00568 194 aa1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 CA3P07451 260 aa1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 HSMCR30P0CW71 290 aa1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 PPIAL4GP0DN37 164 aa1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 CLUP10909 449 aa1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 PDHBP11177 359 aa1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 DBTP11182 482 aaKnown RBP1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 ANXA3P12429 323 aa1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 IGLL1P15814 213 aa1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 PAICSP22234 425 aaKnown RBP1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 ATP5A1P25705 553 aaKnown RBP1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 ADORA2BP29275 332 aa1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 NMT1P30419 496 aaKnown RBP1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 YWHABP31946 246 aaKnown RBP1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 RFC2P35250 354 aa1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 MDH1P40925 334 aaKnown RBP1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 HTR5AP47898 357 aa1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 TFPI2P48307 235 aa1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 SGSHP51688 502 aa1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 YBEYP58557 167 aaPredicted RBP1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 RND3P61587 244 aa1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 NTHL1P78549 312 aa1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 MRPS6P82932 125 aaKnown RBP1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 SPP2Q13103 211 aa1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 EXOSC2Q13868 293 aaKnown RBP1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 KARSQ15046 597 aaKnown RBP1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 PDK3Q15120 406 aa1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 RAB35Q15286 201 aa1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 ZSWIM7Q19AV6 140 aa1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 FAM83EQ2M2I3 478 aa1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 CCDC57Q2TAC2 916 aa1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 LRIT3Q3SXY7 679 aa1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 SLC36A3Q495N2 470 aa1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 ABCA11PQ4W5N1 156 aa1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 EPC2Q52LR7 807 aa1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 TEX44Q53QW1 395 aa1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 LDLRAP1Q5SW96 308 aa1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 ATAD3BQ5T9A4 648 aa1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 OR8G2PQ6IF36 304 aa1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 NIPAL3Q6P499 406 aa1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 ZNF562Q6V9R5 426 aa1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 TMEM184AQ6ZMB5 413 aa1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 DNM1P46Q6ZS02 220 aa1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 TMEM26Q6ZUK4 368 aa1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 C1orf186Q6ZWK4 172 aa1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 LPCAT2Q7L5N7 544 aa1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 AMZ2Q86W34 360 aa1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 CBWD2Q8IUF1 395 aa1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 CCDC36Q8IYA8 594 aa1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 GCNT2Q8N0V5 402 aa1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 MTURNQ8N3F0 131 aa1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 ARFGAP2Q8N6H7 521 aa1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 ARL6IP6Q8N6S5 226 aa1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 FADS6Q8N9I5 356 aa1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 MINDY2Q8NBR6 621 aa1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 OR10G2Q8NGC3 310 aa1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 OR6X1Q8NH79 312 aa1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 CTNNBL1Q8WYA6 563 aaPredicted RBP1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 RSPH1Q8WYR4 309 aa1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 TMEM158Q8WZ71 300 aa1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 P3H4Q92791 437 aa1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 DLX4Q92988 240 aaPredicted RBP1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 MYLPFQ96A32 169 aa1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 CCDC51Q96ER9 411 aa1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 VSTM2LQ96N03 204 aa1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 SPATA13Q96N96 652 aa1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 SLC39A3Q9BRY0 314 aa1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 TBC1D10AQ9BXI6 508 aa1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 ZDHHC11Q9H8X9 412 aa1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 YAE1D1Q9NRH1 226 aa1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 SLC35D1Q9NTN3 355 aa1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 NUDT15Q9NV35 164 aa1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 ZNF586Q9NXT0 402 aa1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 AATFQ9NY61 560 aaKnown RBP eCLIP1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 MRPL39Q9NYK5 338 aaKnown RBP1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 EHFQ9NZC4 300 aa1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 CNOT2Q9NZN8 540 aaKnown RBP1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 ATXN10Q9UBB4 475 aa1.05□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 188.6 ms