RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 IDO1P14902 403 aa4.11□□□□□ -1.75
USP48-211ENST00000526044 IL1RNP18510 177 aa4.11□□□□□ -1.75
USP48-211ENST00000526044 IL10P22301 178 aa4.11□□□□□ -1.75
USP48-211ENST00000526044 CPN2P22792 545 aa4.11□□□□□ -1.75
USP48-211ENST00000526044 TIA1P31483 386 aaKnown RBP eCLIP4.11□□□□□ -1.753e-8■■■□□ 15.4
USP48-211ENST00000526044 DCTDP32321 178 aa4.11□□□□□ -1.75
USP48-211ENST00000526044 PGM1P36871 562 aa4.11□□□□□ -1.75
USP48-211ENST00000526044 RPL3P39023 403 aaKnown RBP4.11□□□□□ -1.75
USP48-211ENST00000526044 ASMTP46597 345 aa4.11□□□□□ -1.75
USP48-211ENST00000526044 OR1D4P47884 311 aa4.11□□□□□ -1.75
USP48-211ENST00000526044 MAPK12P53778 367 aa4.11□□□□□ -1.75
USP48-211ENST00000526044 DIO3P55073 304 aa4.11□□□□□ -1.75
USP48-211ENST00000526044 LIM2P55344 173 aa4.11□□□□□ -1.75
USP48-211ENST00000526044 CLDN8P56748 225 aa4.11□□□□□ -1.75
USP48-211ENST00000526044 STX1BP61266 288 aa4.11□□□□□ -1.75
USP48-211ENST00000526044 IRX1P78414 480 aaPredicted RBP4.11□□□□□ -1.75
USP48-211ENST00000526044 DCDP81605 110 aaKnown RBP4.11□□□□□ -1.75
USP48-211ENST00000526044 ADORA2A-AS1P86434 159 aa4.11□□□□□ -1.75
USP48-211ENST00000526044 ACTN3Q08043 901 aaPredicted RBP4.11□□□□□ -1.75
USP48-211ENST00000526044 MRPL28Q13084 256 aaKnown RBP4.11□□□□□ -1.75
USP48-211ENST00000526044 RUNX2Q13950 521 aa4.11□□□□□ -1.75
USP48-211ENST00000526044 HEPACAMQ14CZ8 416 aa4.11□□□□□ -1.75
USP48-211ENST00000526044 MLIPQ5VWP3 458 aa4.11□□□□□ -1.75
USP48-211ENST00000526044 TMEM198Q66K66 360 aa4.11□□□□□ -1.75
USP48-211ENST00000526044 RUSC1-AS1Q66K80 236 aa4.11□□□□□ -1.75
USP48-211ENST00000526044 RHBDD2Q6NTF9 364 aa4.11□□□□□ -1.75
USP48-211ENST00000526044 COMMD6Q7Z4G1 85 aa4.11□□□□□ -1.75
USP48-211ENST00000526044 MARCH9Q86YJ5 346 aa4.11□□□□□ -1.75
USP48-211ENST00000526044 ZCCHC7Q8N3Z6 543 aaKnown RBP4.11□□□□□ -1.75
USP48-211ENST00000526044 LIX1Q8N485 282 aa4.11□□□□□ -1.75
USP48-211ENST00000526044 METTL27Q8N6F8 245 aaPredicted RBP4.11□□□□□ -1.75
USP48-211ENST00000526044 TMCO5AQ8N6Q1 288 aa4.11□□□□□ -1.75
USP48-211ENST00000526044 SLC38A9Q8NBW4 561 aa4.11□□□□□ -1.75
USP48-211ENST00000526044 CCDC197Q8NCU1 140 aa4.11□□□□□ -1.75
USP48-211ENST00000526044 OR5T3Q8NGG3 340 aa4.11□□□□□ -1.75
USP48-211ENST00000526044 OR14A16Q8NHC5 309 aa4.11□□□□□ -1.75
USP48-211ENST00000526044 C10orf82Q8WW14 230 aa4.11□□□□□ -1.75
USP48-211ENST00000526044 MR1Q95460 341 aa4.11□□□□□ -1.75
USP48-211ENST00000526044 C11orf24Q96F05 449 aaPredicted RBP4.11□□□□□ -1.75
USP48-211ENST00000526044 EGLN2Q96KS0 407 aa4.11□□□□□ -1.75
USP48-211ENST00000526044 FCRL1Q96LA6 429 aa4.11□□□□□ -1.75
USP48-211ENST00000526044 C10orf90Q96M02 699 aa4.11□□□□□ -1.75
USP48-211ENST00000526044 LRFN5Q96NI6 719 aa4.11□□□□□ -1.75
USP48-211ENST00000526044 CATSPER2Q96P56 530 aa4.11□□□□□ -1.75
USP48-211ENST00000526044 C1orf50Q9BV19 199 aa4.11□□□□□ -1.75
USP48-211ENST00000526044 FAIM2Q9BWQ8 316 aa4.11□□□□□ -1.75
USP48-211ENST00000526044 EBPLQ9BY08 206 aa4.11□□□□□ -1.75
USP48-211ENST00000526044 ZNF717Q9BY31 904 aaPredicted RBP4.11□□□□□ -1.75
USP48-211ENST00000526044 ULBP3Q9BZM4 244 aa4.11□□□□□ -1.75
USP48-211ENST00000526044 DPY30Q9C005 99 aa4.11□□□□□ -1.75
USP48-211ENST00000526044 OPA3Q9H6K4 179 aa4.11□□□□□ -1.75
USP48-211ENST00000526044 WDR41Q9HAD4 459 aa4.11□□□□□ -1.75
USP48-211ENST00000526044 LYRM4Q9HD34 91 aa4.11□□□□□ -1.75
USP48-211ENST00000526044 LHX9Q9NQ69 397 aa4.11□□□□□ -1.75
USP48-211ENST00000526044 LYARQ9NX58 379 aaKnown RBP4.11□□□□□ -1.75
USP48-211ENST00000526044 PHF11Q9UIL8 331 aa4.11□□□□□ -1.75
USP48-211ENST00000526044 ZNF580Q9UK33 172 aa4.11□□□□□ -1.75
USP48-211ENST00000526044 FBXW2Q9UKT8 454 aa4.11□□□□□ -1.75
USP48-211ENST00000526044 PSME2Q9UL46 239 aa4.11□□□□□ -1.75
USP48-211ENST00000526044 DLGAP4Q9Y2H0 992 aa4.11□□□□□ -1.75
USP48-211ENST00000526044 MRPS2Q9Y399 296 aaKnown RBP4.11□□□□□ -1.75
USP48-211ENST00000526044 ATG4BQ9Y4P1 393 aa4.11□□□□□ -1.75
USP48-211ENST00000526044 POLR3HQ9Y535 204 aaPredicted RBP4.11□□□□□ -1.75
USP48-211ENST00000526044 ASB4Q9Y574 426 aa4.11□□□□□ -1.75
USP48-211ENST00000526044 MAU2Q9Y6X3 613 aa4.11□□□□□ -1.75
USP48-211ENST00000526044 OTOGLQ3ZCN5 2332 aa4.11□□□□□ -1.75
USP48-211ENST00000526044 SPTBP11277 2137 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 CLEC18AA5D8T8 446 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 ZNF860A6NHJ4 632 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 GABRR3A8MPY1 467 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 KDM4EB2RXH2 506 aaPredicted RBP4.1□□□□□ -1.75
USP48-211ENST00000526044 C4orf51C9J302 202 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 EBAG9O00559 213 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 PGRMC2O15173 223 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 B4GALT2O60909 372 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 CTNSO60931 367 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 RDH16O75452 317 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 DCTN3O75935 186 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 SCELO95171 688 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 LRATO95237 230 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 BMP10O95393 424 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 IL3P08700 152 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 QDPRP09417 244 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 CCDC159P0C7I6 412 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 RNH1P13489 461 aaKnown RBP4.1□□□□□ -1.75
USP48-211ENST00000526044 DDX5P17844 614 aaKnown RBP4.1□□□□□ -1.75
USP48-211ENST00000526044 SDC1P18827 310 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 TCN2P20062 427 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 PRPS1L1P21108 318 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 GPX3P22352 226 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 MYF6P23409 242 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 CD82P27701 267 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 PIK3R1P27986 724 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 S100A3P33764 101 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 TTKP33981 857 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 RORAP35398 523 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 AMTP48728 403 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 ATP4BP51164 291 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 HNRNPH2P55795 449 aaKnown RBP4.1□□□□□ -1.75
USP48-211ENST00000526044 NME5P56597 212 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms