RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 PPP6CO00743 305 aa15.16■□□□□ 0.02
PCDHA3-201ENST00000522353 AP1G1O43747 822 aa15.16■□□□□ 0.02
PCDHA3-201ENST00000522353 SLCO2B1O94956 709 aa15.16■□□□□ 0.02
PCDHA3-201ENST00000522353 ZNF44P15621 663 aa15.16■□□□□ 0.02
PCDHA3-201ENST00000522353 RAB31Q13636 194 aa15.16■□□□□ 0.02
PCDHA3-201ENST00000522353 ADAMTS19Q8TE59 1207 aa15.16■□□□□ 0.02
PCDHA3-201ENST00000522353 ZNF566Q969W8 418 aa15.16■□□□□ 0.02
PCDHA3-201ENST00000522353 PDXPQ96GD0 296 aa15.16■□□□□ 0.02
PCDHA3-201ENST00000522353 TREX2Q9BQ50 279 aaPredicted RBP15.16■□□□□ 0.02
PCDHA3-201ENST00000522353 FGF22Q9HCT0 170 aa15.16■□□□□ 0.02
PCDHA3-201ENST00000522353 OR2S2Q9NQN1 319 aa15.16■□□□□ 0.02
PCDHA3-201ENST00000522353 THSD1Q9NS62 852 aa15.16■□□□□ 0.02
PCDHA3-201ENST00000522353 TM7SF3Q9NS93 570 aa15.16■□□□□ 0.02
PCDHA3-201ENST00000522353 COQ3Q9NZJ6 369 aa15.16■□□□□ 0.02
PCDHA3-201ENST00000522353 TPOP07202 933 aa15.16■□□□□ 0.02
PCDHA3-201ENST00000522353 MAGEA3P43357 314 aa15.16■□□□□ 0.02
PCDHA3-201ENST00000522353 LSM14AQ8ND56 463 aaKnown RBP15.16■□□□□ 0.02
PCDHA3-201ENST00000522353 C7orf34Q96L11 122 aa15.16■□□□□ 0.02
PCDHA3-201ENST00000522353 WBP1LQ9NX94 342 aa15.16■□□□□ 0.02
PCDHA3-201ENST00000522353 MEN1O00255 615 aa15.15■□□□□ 0.02
PCDHA3-201ENST00000522353 SUSD5O60279 629 aa15.15■□□□□ 0.02
PCDHA3-201ENST00000522353 NFATC3Q12968 1075 aa15.15■□□□□ 0.02
PCDHA3-201ENST00000522353 CDK5R2Q13319 367 aa15.15■□□□□ 0.02
PCDHA3-201ENST00000522353 HES5Q5TA89 166 aa15.15■□□□□ 0.02
PCDHA3-201ENST00000522353 PLCXD3Q63HM9 321 aa15.15■□□□□ 0.02
PCDHA3-201ENST00000522353 C6orf15Q6UXA7 325 aaPredicted RBP15.15■□□□□ 0.02
PCDHA3-201ENST00000522353 CHDHQ8NE62 594 aaPredicted RBP15.15■□□□□ 0.02
PCDHA3-201ENST00000522353 COG8Q96MW5 612 aa15.15■□□□□ 0.02
PCDHA3-201ENST00000522353 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.15■□□□□ 0.02
PCDHA3-201ENST00000522353 ASB4Q9Y574 426 aa15.15■□□□□ 0.02
PCDHA3-201ENST00000522353 TMEM269A0A1B0GVZ9 245 aa15.15■□□□□ 0.02
PCDHA3-201ENST00000522353 ZNF749O43361 778 aa15.15■□□□□ 0.02
PCDHA3-201ENST00000522353 SERPINE2P07093 398 aa15.15■□□□□ 0.02
PCDHA3-201ENST00000522353 AKR1C4P17516 323 aa15.15■□□□□ 0.02
PCDHA3-201ENST00000522353 HTR2AP28223 471 aa15.15■□□□□ 0.02
PCDHA3-201ENST00000522353 PKLRP30613 574 aa15.15■□□□□ 0.02
PCDHA3-201ENST00000522353 NKPD1Q17RQ9 610 aa15.15■□□□□ 0.02
PCDHA3-201ENST00000522353 OR8J2Q8NGG1 315 aa15.15■□□□□ 0.02
PCDHA3-201ENST00000522353 SLC30A3Q99726 388 aa15.15■□□□□ 0.02
PCDHA3-201ENST00000522353 KNL1Q8NG31 2342 aa15.15■□□□□ 0.02
PCDHA3-201ENST00000522353 IL7P13232 177 aa15.15■□□□□ 0.02
PCDHA3-201ENST00000522353 LSSP48449 732 aa15.15■□□□□ 0.02
PCDHA3-201ENST00000522353 PXKQ7Z7A4 578 aa15.15■□□□□ 0.02
PCDHA3-201ENST00000522353 OR6Q1Q8NGQ2 317 aa15.15■□□□□ 0.02
PCDHA3-201ENST00000522353 CXCL16Q9H2A7 254 aa15.15■□□□□ 0.02
PCDHA3-201ENST00000522353 AGPAT4Q9NRZ5 378 aa15.15■□□□□ 0.02
PCDHA3-201ENST00000522353 TAS2R3Q9NYW6 316 aa15.15■□□□□ 0.02
PCDHA3-201ENST00000522353 LHX6Q9UPM6 363 aa15.15■□□□□ 0.02
PCDHA3-201ENST00000522353 CORINQ9Y5Q5 1042 aa15.15■□□□□ 0.02
PCDHA3-201ENST00000522353 TRAV27A0A087WT01 109 aa15.15■□□□□ 0.02
PCDHA3-201ENST00000522353 DBHP09172 617 aa15.15■□□□□ 0.02
PCDHA3-201ENST00000522353 MTHFD2P13995 350 aa15.15■□□□□ 0.02
PCDHA3-201ENST00000522353 NCS1P62166 190 aa15.15■□□□□ 0.02
PCDHA3-201ENST00000522353 PGGHGQ32M88 737 aa15.15■□□□□ 0.02
PCDHA3-201ENST00000522353 PLAG1Q6DJT9 500 aa15.15■□□□□ 0.02
PCDHA3-201ENST00000522353 PODNL1Q6PEZ8 512 aa15.15■□□□□ 0.02
PCDHA3-201ENST00000522353 GTF2H4Q92759 462 aa15.15■□□□□ 0.02
PCDHA3-201ENST00000522353 MAELQ96JY0 434 aaKnown RBP15.15■□□□□ 0.02
PCDHA3-201ENST00000522353 B3GNT2Q9NY97 397 aa15.15■□□□□ 0.02
PCDHA3-201ENST00000522353 VSX1Q9NZR4 365 aaPredicted RBP15.15■□□□□ 0.02
PCDHA3-201ENST00000522353 TP53TG5Q9Y2B4 290 aa15.15■□□□□ 0.02
PCDHA3-201ENST00000522353 TMEM184BQ9Y519 407 aaPredicted RBP15.15■□□□□ 0.02
PCDHA3-201ENST00000522353 HTR5AP47898 357 aa15.14■□□□□ 0.01
PCDHA3-201ENST00000522353 LTB4RQ15722 352 aa15.14■□□□□ 0.01
PCDHA3-201ENST00000522353 NKAIN1Q4KMZ8 207 aa15.14■□□□□ 0.01
PCDHA3-201ENST00000522353 RTL6Q6ICC9 239 aa15.14■□□□□ 0.01
PCDHA3-201ENST00000522353 SLC41A2Q96JW4 573 aa15.14■□□□□ 0.01
PCDHA3-201ENST00000522353 ARL6Q9H0F7 186 aa15.14■□□□□ 0.01
PCDHA3-201ENST00000522353 ERVK13-1Q9NX77 482 aa15.14■□□□□ 0.01
PCDHA3-201ENST00000522353 A8MV72 311 aaPredicted RBP15.14■□□□□ 0.01
PCDHA3-201ENST00000522353 TRAPPC2LH3BP13 241 aa15.14■□□□□ 0.01
PCDHA3-201ENST00000522353 FOXD2O60548 495 aaPredicted RBP15.14■□□□□ 0.01
PCDHA3-201ENST00000522353 FBXO45P0C2W1 286 aa15.14■□□□□ 0.01
PCDHA3-201ENST00000522353 TACR3P29371 465 aa15.14■□□□□ 0.01
PCDHA3-201ENST00000522353 BMXP51813 675 aa15.14■□□□□ 0.01
PCDHA3-201ENST00000522353 SLC36A2Q495M3 483 aa15.14■□□□□ 0.01
PCDHA3-201ENST00000522353 METRNLQ641Q3 311 aa15.14■□□□□ 0.01
PCDHA3-201ENST00000522353 FAM111BQ6SJ93 734 aa15.14■□□□□ 0.01
PCDHA3-201ENST00000522353 KCTD20Q7Z5Y7 419 aa15.14■□□□□ 0.01
PCDHA3-201ENST00000522353 TMEM150AQ86TG1 271 aa15.14■□□□□ 0.01
PCDHA3-201ENST00000522353 RPS19BP1Q86WX3 136 aaKnown RBP15.14■□□□□ 0.01
PCDHA3-201ENST00000522353 LKAAEAR1Q8TD35 194 aa15.14■□□□□ 0.01
PCDHA3-201ENST00000522353 ASB12Q8WXK4 309 aa15.14■□□□□ 0.01
PCDHA3-201ENST00000522353 SLC19A3Q9BZV2 496 aa15.14■□□□□ 0.01
PCDHA3-201ENST00000522353 APMAPQ9HDC9 416 aa15.14■□□□□ 0.01
PCDHA3-201ENST00000522353 POLE4Q9NR33 117 aa15.14■□□□□ 0.01
PCDHA3-201ENST00000522353 TEX10Q9NXF1 929 aaPredicted RBP15.14■□□□□ 0.01
PCDHA3-201ENST00000522353 WDR37Q9Y2I8 494 aa15.14■□□□□ 0.01
PCDHA3-201ENST00000522353 EEF1E1-BLOC1S5C9J1V9 151 aa15.14■□□□□ 0.01
PCDHA3-201ENST00000522353 D6RAR5 112 aa15.14■□□□□ 0.01
PCDHA3-201ENST00000522353 ADGRG5Q8IZF4 528 aa15.14■□□□□ 0.01
PCDHA3-201ENST00000522353 DTX3Q8N9I9 347 aa15.14■□□□□ 0.01
PCDHA3-201ENST00000522353 ZBTB8BQ8NAP8 495 aaPredicted RBP15.14■□□□□ 0.01
PCDHA3-201ENST00000522353 TOMM40LQ969M1 308 aa15.14■□□□□ 0.01
PCDHA3-201ENST00000522353 EBF1Q9UH73 591 aa15.14■□□□□ 0.01
PCDHA3-201ENST00000522353 MYH9P35579 1960 aaKnown RBP15.14■□□□□ 0.01
PCDHA3-201ENST00000522353 NWD2Q9ULI1 1742 aa15.14■□□□□ 0.01
PCDHA3-201ENST00000522353 TARM1B6A8C7 271 aa15.14■□□□□ 0.01
PCDHA3-201ENST00000522353 CCDC58Q4VC31 144 aa15.14■□□□□ 0.01
PCDHA3-201ENST00000522353 HENMT1Q5T8I9 393 aaKnown RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms