RNA–Protein interactions for RNA: ENST00000521578.5

PTP4A3-204, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTP4A3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-204ENST00000521578 FDCSPQ8NFU4 85 aa20.22■□□□□ 0.83
PTP4A3-204ENST00000521578 OR8J1Q8NGP2 316 aa20.22■□□□□ 0.83
PTP4A3-204ENST00000521578 GNPDA2Q8TDQ7 276 aa20.22■□□□□ 0.83
PTP4A3-204ENST00000521578 CDCP1Q9H5V8 836 aa20.22■□□□□ 0.83
PTP4A3-204ENST00000521578 OCEL1Q9H607 264 aa20.22■□□□□ 0.83
PTP4A3-204ENST00000521578 FOLH1BQ9HBA9 442 aa20.22■□□□□ 0.83
PTP4A3-204ENST00000521578 CFL2Q9Y281 166 aa20.22■□□□□ 0.83
PTP4A3-204ENST00000521578 CNTRLQ7Z7A1 2325 aa20.22■□□□□ 0.83
PTP4A3-204ENST00000521578 AGAP5A6NIR3 686 aa20.22■□□□□ 0.83
PTP4A3-204ENST00000521578 TMEM200CA6NKL6 621 aa20.22■□□□□ 0.83
PTP4A3-204ENST00000521578 LARS2Q15031 903 aaKnown RBP20.22■□□□□ 0.83
PTP4A3-204ENST00000521578 NNATQ16517 81 aa20.22■□□□□ 0.83
PTP4A3-204ENST00000521578 OCLNQ16625 522 aa20.22■□□□□ 0.83
PTP4A3-204ENST00000521578 ZNF829Q3KNS6 432 aaPredicted RBP20.22■□□□□ 0.83
PTP4A3-204ENST00000521578 HLA-DQA1Q5Y7H0 255 aa20.22■□□□□ 0.83
PTP4A3-204ENST00000521578 H3F3CQ6NXT2 135 aa20.22■□□□□ 0.83
PTP4A3-204ENST00000521578 LINC00299Q6ZSB3 139 aa20.22■□□□□ 0.83
PTP4A3-204ENST00000521578 OR5L2Q8NGL0 311 aa20.22■□□□□ 0.83
PTP4A3-204ENST00000521578 OR8K3Q8NH51 312 aa20.22■□□□□ 0.83
PTP4A3-204ENST00000521578 PMM1Q92871 262 aa20.22■□□□□ 0.83
PTP4A3-204ENST00000521578 GPA33Q99795 319 aa20.22■□□□□ 0.83
PTP4A3-204ENST00000521578 CACYBPQ9HB71 228 aaKnown RBP20.22■□□□□ 0.83
PTP4A3-204ENST00000521578 EPG5Q9HCE0 2579 aa20.21■□□□□ 0.83
PTP4A3-204ENST00000521578 ITPR1Q14643 2758 aa20.21■□□□□ 0.83
PTP4A3-204ENST00000521578 WWP2O00308 870 aa20.21■□□□□ 0.83
PTP4A3-204ENST00000521578 ENTPD6O75354 484 aa20.21■□□□□ 0.83
PTP4A3-204ENST00000521578 RPS4Y1P22090 263 aaKnown RBP20.21■□□□□ 0.83
PTP4A3-204ENST00000521578 TRHRP34981 398 aaPredicted RBP20.21■□□□□ 0.83
PTP4A3-204ENST00000521578 LIPAP38571 399 aa20.21■□□□□ 0.83
PTP4A3-204ENST00000521578 EEF1A1P68104 462 aaKnown RBP20.21■□□□□ 0.83
PTP4A3-204ENST00000521578 CDK5Q00535 292 aa20.21■□□□□ 0.83
PTP4A3-204ENST00000521578 TIGD6Q17RP2 521 aa20.21■□□□□ 0.83
PTP4A3-204ENST00000521578 EIPR1Q53HC9 387 aa20.21■□□□□ 0.83
PTP4A3-204ENST00000521578 MEDAGQ5VYS4 303 aa20.21■□□□□ 0.83
PTP4A3-204ENST00000521578 RPS19BP1Q86WX3 136 aaKnown RBP20.21■□□□□ 0.83
PTP4A3-204ENST00000521578 TOR1AIP2Q8NFQ8 470 aa20.21■□□□□ 0.83
PTP4A3-204ENST00000521578 HOXB13Q92826 284 aaPredicted RBP20.21■□□□□ 0.83
PTP4A3-204ENST00000521578 VSTM2LQ96N03 204 aa20.21■□□□□ 0.83
PTP4A3-204ENST00000521578 PRR14Q9BWN1 585 aa20.21■□□□□ 0.83
PTP4A3-204ENST00000521578 POLDIP3Q9BY77 421 aaKnown RBP20.21■□□□□ 0.83
PTP4A3-204ENST00000521578 CTPS2Q9NRF8 586 aa20.21■□□□□ 0.83
PTP4A3-204ENST00000521578 MYOTQ9UBF9 498 aa20.21■□□□□ 0.83
PTP4A3-204ENST00000521578 AP3D1O14617 1153 aa20.2■□□□□ 0.82
PTP4A3-204ENST00000521578 FRS3O43559 492 aa20.2■□□□□ 0.82
PTP4A3-204ENST00000521578 OR5F1O95221 314 aa20.2■□□□□ 0.82
PTP4A3-204ENST00000521578 AK1P00568 194 aa20.2■□□□□ 0.82
PTP4A3-204ENST00000521578 ADORA3P0DMS8 318 aa20.2■□□□□ 0.82
PTP4A3-204ENST00000521578 GIPRP48546 466 aa20.2■□□□□ 0.82
PTP4A3-204ENST00000521578 RGS8P57771 180 aaPredicted RBP20.2■□□□□ 0.82
PTP4A3-204ENST00000521578 LSM11P83369 360 aaKnown RBP eCLIP20.2■□□□□ 0.826e-6■■□□□ 14.5
PTP4A3-204ENST00000521578 DECR1Q16698 335 aa20.2■□□□□ 0.82
PTP4A3-204ENST00000521578 AGAP7PQ5VUJ5 663 aa20.2■□□□□ 0.82
PTP4A3-204ENST00000521578 ZNF836Q6ZNA1 936 aa20.2■□□□□ 0.82
PTP4A3-204ENST00000521578 ZNF619Q8N2I2 560 aa20.2■□□□□ 0.82
PTP4A3-204ENST00000521578 FAM26EQ8N5C1 309 aa20.2■□□□□ 0.82
PTP4A3-204ENST00000521578 NUBPLQ8TB37 319 aa20.2■□□□□ 0.82
PTP4A3-204ENST00000521578 ADIPOR1Q96A54 375 aa20.2■□□□□ 0.82
PTP4A3-204ENST00000521578 AGAP4Q96P64 663 aa20.2■□□□□ 0.82
PTP4A3-204ENST00000521578 IL4I1Q96RQ9 567 aa20.2■□□□□ 0.82
PTP4A3-204ENST00000521578 ZNF552Q9H707 407 aaPredicted RBP20.2■□□□□ 0.82
PTP4A3-204ENST00000521578 STX11O75558 287 aa20.19■□□□□ 0.82
PTP4A3-204ENST00000521578 ITGB2P05107 769 aa20.19■□□□□ 0.82
PTP4A3-204ENST00000521578 CALRP27797 417 aaKnown RBP20.19■□□□□ 0.82
PTP4A3-204ENST00000521578 NR0B1P51843 470 aaKnown RBP20.19■□□□□ 0.82
PTP4A3-204ENST00000521578 MLLT10P55197 1068 aa20.19■□□□□ 0.82
PTP4A3-204ENST00000521578 EFNB1P98172 346 aa20.19■□□□□ 0.82
PTP4A3-204ENST00000521578 DCST2Q5T1A1 773 aa20.19■□□□□ 0.82
PTP4A3-204ENST00000521578 LINC00696Q6ZRV3 163 aa20.19■□□□□ 0.82
PTP4A3-204ENST00000521578 ZNF367Q7RTV3 350 aa20.19■□□□□ 0.82
PTP4A3-204ENST00000521578 SLC46A3Q7Z3Q1 461 aa20.19■□□□□ 0.82
PTP4A3-204ENST00000521578 BORCS5Q969J3 196 aa20.19■□□□□ 0.82
PTP4A3-204ENST00000521578 MCHR1Q99705 422 aa20.19■□□□□ 0.82
PTP4A3-204ENST00000521578 POLR2J2Q9GZM3 115 aaKnown RBP20.19■□□□□ 0.82
PTP4A3-204ENST00000521578 NXF5Q9H1B4 397 aaKnown RBP20.19■□□□□ 0.82
PTP4A3-204ENST00000521578 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP20.19■□□□□ 0.821e-6■■■■□ 24.8
PTP4A3-204ENST00000521578 CPSF4LA6NMK7 179 aaKnown RBP20.19■□□□□ 0.82
PTP4A3-204ENST00000521578 CEACAM4O75871 244 aa20.19■□□□□ 0.82
PTP4A3-204ENST00000521578 OR2J2O76002 312 aa20.19■□□□□ 0.82
PTP4A3-204ENST00000521578 PTHP01270 115 aa20.19■□□□□ 0.82
PTP4A3-204ENST00000521578 DBIP07108 87 aaKnown RBP20.19■□□□□ 0.82
PTP4A3-204ENST00000521578 MLF1P58340 268 aa20.19■□□□□ 0.82
PTP4A3-204ENST00000521578 TSPAN31Q12999 210 aa20.19■□□□□ 0.82
PTP4A3-204ENST00000521578 GINS1Q14691 196 aa20.19■□□□□ 0.82
PTP4A3-204ENST00000521578 ACER2Q5QJU3 275 aa20.19■□□□□ 0.82
PTP4A3-204ENST00000521578 PRICKLE2Q7Z3G6 844 aa20.19■□□□□ 0.82
PTP4A3-204ENST00000521578 ZNF441Q8N8Z8 693 aa20.19■□□□□ 0.82
PTP4A3-204ENST00000521578 NDNFQ8TB73 568 aa20.19■□□□□ 0.82
PTP4A3-204ENST00000521578 DYNC2LI1Q8TCX1 351 aa20.19■□□□□ 0.82
PTP4A3-204ENST00000521578 ACOT11Q8WXI4 607 aaPredicted RBP20.19■□□□□ 0.82
PTP4A3-204ENST00000521578 LGALS12Q96DT0 336 aa20.19■□□□□ 0.82
PTP4A3-204ENST00000521578 POLE3Q9NRF9 147 aa20.19■□□□□ 0.82
PTP4A3-204ENST00000521578 TEKT2Q9UIF3 430 aa20.19■□□□□ 0.82
PTP4A3-204ENST00000521578 RPL36Q9Y3U8 105 aaKnown RBP20.19■□□□□ 0.82
PTP4A3-204ENST00000521578 PIEZO2Q9H5I5 2752 aa20.18■□□□□ 0.82
PTP4A3-204ENST00000521578 M0R3G1 203 aa20.18■□□□□ 0.82
PTP4A3-204ENST00000521578 KIAA0513O60268 411 aa20.18■□□□□ 0.82
PTP4A3-204ENST00000521578 ITGA10O75578 1167 aa20.18■□□□□ 0.82
PTP4A3-204ENST00000521578 CT45A8P0DMV1 189 aa20.18■□□□□ 0.82
PTP4A3-204ENST00000521578 CT45A9P0DMV2 189 aa20.18■□□□□ 0.82
PTP4A3-204ENST00000521578 PPICP45877 212 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms