RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 PLD3Q8IV08 490 aa3.54□□□□□ -1.84
CLK4-207ENST00000520909 SLC25A45Q8N413 288 aa3.54□□□□□ -1.84
CLK4-207ENST00000520909 TBC1D19Q8N5T2 526 aa3.54□□□□□ -1.84
CLK4-207ENST00000520909 CPSF7Q8N684 471 aaKnown RBP3.54□□□□□ -1.84
CLK4-207ENST00000520909 GBP7Q8N8V2 638 aaPredicted RBP3.54□□□□□ -1.84
CLK4-207ENST00000520909 Q8N9G6 341 aaPredicted RBP3.54□□□□□ -1.84
CLK4-207ENST00000520909 ZBTB44Q8NCP5 570 aa3.54□□□□□ -1.84
CLK4-207ENST00000520909 OR2L3Q8NG85 312 aa3.54□□□□□ -1.84
CLK4-207ENST00000520909 OR2A1Q8NGT9 310 aa3.54□□□□□ -1.84
CLK4-207ENST00000520909 OR2T11Q8NH01 316 aa3.54□□□□□ -1.84
CLK4-207ENST00000520909 MRGPRDQ8TDS7 321 aa3.54□□□□□ -1.84
CLK4-207ENST00000520909 SLC22A18Q96BI1 424 aa3.54□□□□□ -1.84
CLK4-207ENST00000520909 CMTM5Q96DZ9 223 aa3.54□□□□□ -1.84
CLK4-207ENST00000520909 WDR34Q96EX3 536 aa3.54□□□□□ -1.84
CLK4-207ENST00000520909 CMTM7Q96FZ5 175 aa3.54□□□□□ -1.84
CLK4-207ENST00000520909 GMPPAQ96IJ6 420 aaPredicted RBP3.54□□□□□ -1.84
CLK4-207ENST00000520909 C18orf12Q96KH6 178 aa3.54□□□□□ -1.84
CLK4-207ENST00000520909 OR2A14Q96R47 310 aa3.54□□□□□ -1.84
CLK4-207ENST00000520909 ZNF300Q96RE9 604 aaPredicted RBP3.54□□□□□ -1.84
CLK4-207ENST00000520909 DPH7Q9BTV6 452 aa3.54□□□□□ -1.84
CLK4-207ENST00000520909 C1orf50Q9BV19 199 aa3.54□□□□□ -1.84
CLK4-207ENST00000520909 CCDC106Q9BWC9 280 aa3.54□□□□□ -1.84
CLK4-207ENST00000520909 GTPBP2Q9BX10 602 aaKnown RBP3.54□□□□□ -1.84
CLK4-207ENST00000520909 ACPTQ9BZG2 426 aa3.54□□□□□ -1.84
CLK4-207ENST00000520909 ARRDC1-AS1Q9H2J1 176 aa3.54□□□□□ -1.84
CLK4-207ENST00000520909 SPNS1Q9H2V7 528 aa3.54□□□□□ -1.84
CLK4-207ENST00000520909 EHD1Q9H4M9 534 aa3.54□□□□□ -1.84
CLK4-207ENST00000520909 SEBOXQ9HB31 216 aaPredicted RBP3.54□□□□□ -1.84
CLK4-207ENST00000520909 ATAD3AQ9NVI7 634 aa3.54□□□□□ -1.84
CLK4-207ENST00000520909 NMRK1Q9NWW6 199 aa3.54□□□□□ -1.84
CLK4-207ENST00000520909 HRASLS2Q9NWW9 162 aa3.54□□□□□ -1.84
CLK4-207ENST00000520909 C1orf109Q9NX04 203 aa3.54□□□□□ -1.84
CLK4-207ENST00000520909 VPS29Q9UBQ0 182 aa3.54□□□□□ -1.84
CLK4-207ENST00000520909 HSPB7Q9UBY9 170 aa3.54□□□□□ -1.84
CLK4-207ENST00000520909 GMEB2Q9UKD1 530 aa3.54□□□□□ -1.84
CLK4-207ENST00000520909 TP53TG3Q9ULZ0 132 aa3.54□□□□□ -1.84
CLK4-207ENST00000520909 SNX7Q9UNH6 387 aa3.54□□□□□ -1.84
CLK4-207ENST00000520909 EIF3LQ9Y262 564 aaKnown RBP3.54□□□□□ -1.84
CLK4-207ENST00000520909 CCL27Q9Y4X3 112 aa3.54□□□□□ -1.84
CLK4-207ENST00000520909 CSNK1G3Q9Y6M4 447 aa3.54□□□□□ -1.84
CLK4-207ENST00000520909 CACNA1EQ15878 2313 aa3.54□□□□□ -1.84
CLK4-207ENST00000520909 LAMA1P25391 3075 aa3.54□□□□□ -1.84
CLK4-207ENST00000520909 VPS13AQ96RL7 3174 aa3.54□□□□□ -1.84
CLK4-207ENST00000520909 PI4KAP42356 2102 aa3.53□□□□□ -1.84
CLK4-207ENST00000520909 IGKV1-8A0A0C4DH67 115 aa3.53□□□□□ -1.84
CLK4-207ENST00000520909 A0A0J9YY10 115 aa3.53□□□□□ -1.84
CLK4-207ENST00000520909 TRBC2A0A5B9 178 aa3.53□□□□□ -1.84
CLK4-207ENST00000520909 OR5K3A6NET4 321 aa3.53□□□□□ -1.84
CLK4-207ENST00000520909 C9JVG2 144 aa3.53□□□□□ -1.84
CLK4-207ENST00000520909 TAF4O00268 1085 aa3.53□□□□□ -1.84
CLK4-207ENST00000520909 FOXE1O00358 373 aaPredicted RBP3.53□□□□□ -1.84
CLK4-207ENST00000520909 SAP18O00422 153 aaKnown RBP3.53□□□□□ -1.84
CLK4-207ENST00000520909 HS3ST1O14792 307 aa3.53□□□□□ -1.84
CLK4-207ENST00000520909 SLC22A2O15244 555 aa3.53□□□□□ -1.84
CLK4-207ENST00000520909 YKT6O15498 198 aa3.53□□□□□ -1.84
CLK4-207ENST00000520909 TNFSF14O43557 240 aa3.53□□□□□ -1.84
CLK4-207ENST00000520909 LCMT2O60294 686 aaKnown RBP3.53□□□□□ -1.84
CLK4-207ENST00000520909 ATP5HO75947 161 aa3.53□□□□□ -1.84
CLK4-207ENST00000520909 RSL1D1O76021 490 aaKnown RBP3.53□□□□□ -1.84
CLK4-207ENST00000520909 MYO1DO94832 1006 aa3.53□□□□□ -1.84
CLK4-207ENST00000520909 ETHE1O95571 254 aa3.53□□□□□ -1.84
CLK4-207ENST00000520909 DNAH10OSP0CZ25 163 aa3.53□□□□□ -1.84
CLK4-207ENST00000520909 GIMD1P0DJR0 217 aa3.53□□□□□ -1.84
CLK4-207ENST00000520909 IGHV4-38-2P0DP08 117 aa3.53□□□□□ -1.84
CLK4-207ENST00000520909 ALPPL2P10696 532 aa3.53□□□□□ -1.84
CLK4-207ENST00000520909 THRAP10827 490 aa3.53□□□□□ -1.84
CLK4-207ENST00000520909 BCKDHAP12694 445 aa3.53□□□□□ -1.84
CLK4-207ENST00000520909 COX4I1P13073 169 aa3.53□□□□□ -1.84
CLK4-207ENST00000520909 HSD3B1P14060 373 aa3.53□□□□□ -1.84
CLK4-207ENST00000520909 PVRP15151 417 aa3.53□□□□□ -1.84
CLK4-207ENST00000520909 CD1EP15812 388 aa3.53□□□□□ -1.84
CLK4-207ENST00000520909 GPX3P22352 226 aa3.53□□□□□ -1.84
CLK4-207ENST00000520909 GATA2P23769 480 aaPredicted RBP3.53□□□□□ -1.84
CLK4-207ENST00000520909 HRH2P25021 359 aa3.53□□□□□ -1.84
CLK4-207ENST00000520909 EPHA8P29322 1005 aaPredicted RBP3.53□□□□□ -1.84
CLK4-207ENST00000520909 SERPINB1P30740 379 aa3.53□□□□□ -1.84
CLK4-207ENST00000520909 ATP4BP51164 291 aa3.53□□□□□ -1.84
CLK4-207ENST00000520909 MNAT1P51948 309 aa3.53□□□□□ -1.84
CLK4-207ENST00000520909 ATXN3P54252 364 aaPredicted RBP3.53□□□□□ -1.84
CLK4-207ENST00000520909 DIO3P55073 304 aa3.53□□□□□ -1.84
CLK4-207ENST00000520909 OR1D5P58170 312 aa3.53□□□□□ -1.84
CLK4-207ENST00000520909 UFM1P61960 85 aa3.53□□□□□ -1.84
CLK4-207ENST00000520909 RPL38P63173 70 aaKnown RBP3.53□□□□□ -1.84
CLK4-207ENST00000520909 RPP30P78346 268 aaKnown RBP3.53□□□□□ -1.84
CLK4-207ENST00000520909 ZNF33BQ06732 778 aa3.53□□□□□ -1.84
CLK4-207ENST00000520909 BNIP1Q12981 228 aa3.53□□□□□ -1.84
CLK4-207ENST00000520909 CSTF3Q12996 717 aaKnown RBP3.53□□□□□ -1.84
CLK4-207ENST00000520909 MAD2L1Q13257 205 aaPredicted RBP3.53□□□□□ -1.84
CLK4-207ENST00000520909 CYLC2Q14093 348 aaPredicted RBP3.53□□□□□ -1.84
CLK4-207ENST00000520909 HERC3Q15034 1050 aa3.53□□□□□ -1.84
CLK4-207ENST00000520909 SLC5A12Q1EHB4 618 aa3.53□□□□□ -1.84
CLK4-207ENST00000520909 SMU1Q2TAY7 513 aa3.53□□□□□ -1.84
CLK4-207ENST00000520909 SNAI3Q3KNW1 292 aa3.53□□□□□ -1.84
CLK4-207ENST00000520909 RFTN2Q52LD8 501 aaPredicted RBP3.53□□□□□ -1.84
CLK4-207ENST00000520909 ZNF766Q5HY98 468 aa3.53□□□□□ -1.84
CLK4-207ENST00000520909 NKAIN2Q5VXU1 208 aa3.53□□□□□ -1.84
CLK4-207ENST00000520909 FAM91A1Q658Y4 838 aa3.53□□□□□ -1.84
CLK4-207ENST00000520909 ACSM2BQ68CK6 577 aa3.53□□□□□ -1.84
CLK4-207ENST00000520909 NOXRED1Q6NXP6 359 aa3.53□□□□□ -1.84
CLK4-207ENST00000520909 IRGCQ6NXR0 463 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms