RNA–Protein interactions for RNA: ENST00000519661.5

SPIDR-212, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,035 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-212ENST00000519661 CPNE4Q96A23 557 aaPredicted RBP10.34□□□□□ -0.75
SPIDR-212ENST00000519661 ZNF583Q96ND8 569 aa10.34□□□□□ -0.75
SPIDR-212ENST00000519661 TRIB1Q96RU8 372 aa10.34□□□□□ -0.75
SPIDR-212ENST00000519661 ELAC2Q9BQ52 826 aaKnown RBP10.34□□□□□ -0.75
SPIDR-212ENST00000519661 PCDHAC1Q9H158 963 aa10.34□□□□□ -0.75
SPIDR-212ENST00000519661 PIGMQ9H3S5 423 aa10.34□□□□□ -0.75
SPIDR-212ENST00000519661 SLC24A3Q9HC58 644 aa10.34□□□□□ -0.75
SPIDR-212ENST00000519661 GID8Q9NWU2 228 aa10.34□□□□□ -0.75
SPIDR-212ENST00000519661 ARMCX1Q9P291 453 aa10.34□□□□□ -0.75
SPIDR-212ENST00000519661 ABCD2Q9UBJ2 740 aa10.34□□□□□ -0.75
SPIDR-212ENST00000519661 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.34□□□□□ -0.75
SPIDR-212ENST00000519661 CHRNA9Q9UGM1 479 aa10.34□□□□□ -0.75
SPIDR-212ENST00000519661 ZNF232Q9UNY5 417 aa10.34□□□□□ -0.75
SPIDR-212ENST00000519661 TRAPPC4Q9Y296 219 aa10.34□□□□□ -0.75
SPIDR-212ENST00000519661 HDGFL3Q9Y3E1 203 aa10.34□□□□□ -0.75
SPIDR-212ENST00000519661 NOTCH2Q04721 2471 aa10.34□□□□□ -0.75
SPIDR-212ENST00000519661 DOCK7Q96N67 2140 aa10.34□□□□□ -0.75
SPIDR-212ENST00000519661 CRYBG3Q68DQ2 2970 aa10.34□□□□□ -0.75
SPIDR-212ENST00000519661 A0A1W2PNV4 684 aa10.33□□□□□ -0.76
SPIDR-212ENST00000519661 TMEM229AB2RXF0 380 aa10.33□□□□□ -0.76
SPIDR-212ENST00000519661 SHISA8B8ZZ34 492 aa10.33□□□□□ -0.76
SPIDR-212ENST00000519661 H3BML4 177 aa10.33□□□□□ -0.76
SPIDR-212ENST00000519661 SS18L1O75177 396 aaPredicted RBP10.33□□□□□ -0.76
SPIDR-212ENST00000519661 SERPINB7O75635 380 aa10.33□□□□□ -0.76
SPIDR-212ENST00000519661 FAM107AO95990 144 aa10.33□□□□□ -0.76
SPIDR-212ENST00000519661 COX4I1P13073 169 aa10.33□□□□□ -0.76
SPIDR-212ENST00000519661 SHC1P29353 583 aa10.33□□□□□ -0.76
SPIDR-212ENST00000519661 ASCL1P50553 236 aa10.33□□□□□ -0.76
SPIDR-212ENST00000519661 AGFG1P52594 562 aaKnown RBP10.33□□□□□ -0.76
SPIDR-212ENST00000519661 SORDQ00796 357 aa10.33□□□□□ -0.76
SPIDR-212ENST00000519661 PDK3Q15120 406 aa10.33□□□□□ -0.76
SPIDR-212ENST00000519661 VMACQ2NL98 169 aa10.33□□□□□ -0.76
SPIDR-212ENST00000519661 SYT14P1Q58G82 188 aa10.33□□□□□ -0.76
SPIDR-212ENST00000519661 ZNF311Q5JNZ3 666 aa10.33□□□□□ -0.76
SPIDR-212ENST00000519661 RPS26P11Q5JNZ5 115 aaPredicted RBP10.33□□□□□ -0.76
SPIDR-212ENST00000519661 PDSS1Q5T2R2 415 aa10.33□□□□□ -0.76
SPIDR-212ENST00000519661 SWT1Q5T5J6 900 aaKnown RBP10.33□□□□□ -0.76
SPIDR-212ENST00000519661 INTS11Q5TA45 600 aaKnown RBP10.33□□□□□ -0.76
SPIDR-212ENST00000519661 WBP2NLQ6ICG8 309 aa10.33□□□□□ -0.76
SPIDR-212ENST00000519661 ERICH5Q6P6B1 374 aa10.33□□□□□ -0.76
SPIDR-212ENST00000519661 PATL1Q86TB9 770 aaKnown RBP10.33□□□□□ -0.76
SPIDR-212ENST00000519661 VRK2Q86Y07 508 aa10.33□□□□□ -0.76
SPIDR-212ENST00000519661 CLIP4Q8N3C7 705 aa10.33□□□□□ -0.76
SPIDR-212ENST00000519661 OR5M1Q8NGP8 315 aa10.33□□□□□ -0.76
SPIDR-212ENST00000519661 NFKBIDQ8NI38 313 aa10.33□□□□□ -0.76
SPIDR-212ENST00000519661 FNDC9Q8TBE3 224 aa10.33□□□□□ -0.76
SPIDR-212ENST00000519661 FIG4Q92562 907 aa10.33□□□□□ -0.76
SPIDR-212ENST00000519661 CMTM5Q96DZ9 223 aa10.33□□□□□ -0.76
SPIDR-212ENST00000519661 GMPPAQ96IJ6 420 aaPredicted RBP10.33□□□□□ -0.76
SPIDR-212ENST00000519661 ZNF607Q96SK3 696 aa10.33□□□□□ -0.76
SPIDR-212ENST00000519661 HOPXQ9BPY8 73 aaPredicted RBP10.33□□□□□ -0.76
SPIDR-212ENST00000519661 TACO1Q9BSH4 297 aaKnown RBP10.33□□□□□ -0.76
SPIDR-212ENST00000519661 PINK1Q9BXM7 581 aa10.33□□□□□ -0.76
SPIDR-212ENST00000519661 BCO1Q9HAY6 547 aa10.33□□□□□ -0.76
SPIDR-212ENST00000519661 KCNJ16Q9NPI9 418 aa10.33□□□□□ -0.76
SPIDR-212ENST00000519661 SERINC1Q9NRX5 453 aa10.33□□□□□ -0.76
SPIDR-212ENST00000519661 RLIMQ9NVW2 624 aa10.33□□□□□ -0.76
SPIDR-212ENST00000519661 OSGIN1Q9UJX0 560 aa10.33□□□□□ -0.76
SPIDR-212ENST00000519661 ANGPT4Q9Y264 503 aa10.33□□□□□ -0.76
SPIDR-212ENST00000519661 ARL2BPQ9Y2Y0 163 aa10.33□□□□□ -0.76
SPIDR-212ENST00000519661 SPIN1Q9Y657 262 aaPredicted RBP10.33□□□□□ -0.76
SPIDR-212ENST00000519661 FBN2P35556 2912 aa10.33□□□□□ -0.76
SPIDR-212ENST00000519661 IGKV3D-15A0A087WSY6 115 aa10.32□□□□□ -0.76
SPIDR-212ENST00000519661 C5orf58C9J3I9 102 aa10.32□□□□□ -0.76
SPIDR-212ENST00000519661 NDUFAB1O14561 156 aa10.32□□□□□ -0.76
SPIDR-212ENST00000519661 AP3D1O14617 1153 aa10.32□□□□□ -0.76
SPIDR-212ENST00000519661 MSTNO14793 375 aa10.32□□□□□ -0.76
SPIDR-212ENST00000519661 AQP8O94778 261 aa10.32□□□□□ -0.76
SPIDR-212ENST00000519661 PMS2P2O95744 297 aa10.32□□□□□ -0.76
SPIDR-212ENST00000519661 NUDT14O95848 222 aa10.32□□□□□ -0.76
SPIDR-212ENST00000519661 LGI1O95970 557 aa10.32□□□□□ -0.76
SPIDR-212ENST00000519661 TMIGD3P0DMS9 266 aaPredicted RBP10.32□□□□□ -0.76
SPIDR-212ENST00000519661 GRNP28799 593 aaKnown RBP10.32□□□□□ -0.76
SPIDR-212ENST00000519661 KIR2DL2P43627 348 aaPredicted RBP10.32□□□□□ -0.76
SPIDR-212ENST00000519661 KCNJ5P48544 419 aa10.32□□□□□ -0.76
SPIDR-212ENST00000519661 POLR2HP52434 150 aaKnown RBP10.32□□□□□ -0.76
SPIDR-212ENST00000519661 GNGT1P63211 74 aa10.32□□□□□ -0.76
SPIDR-212ENST00000519661 FOXF2Q12947 444 aa10.32□□□□□ -0.76
SPIDR-212ENST00000519661 PON3Q15166 354 aa10.32□□□□□ -0.76
SPIDR-212ENST00000519661 RNPS1Q15287 305 aaKnown RBP10.32□□□□□ -0.76
SPIDR-212ENST00000519661 NRF1Q16656 503 aa10.32□□□□□ -0.76
SPIDR-212ENST00000519661 RABL3Q5HYI8 236 aa10.32□□□□□ -0.76
SPIDR-212ENST00000519661 TMPPEQ6ZT21 453 aa10.32□□□□□ -0.76
SPIDR-212ENST00000519661 FAM214BQ7L5A3 538 aa10.32□□□□□ -0.76
SPIDR-212ENST00000519661 CPLX4Q7Z7G2 160 aa10.32□□□□□ -0.76
SPIDR-212ENST00000519661 ATG4DQ86TL0 474 aaPredicted RBP10.32□□□□□ -0.76
SPIDR-212ENST00000519661 COMTD1Q86VU5 262 aa10.32□□□□□ -0.76
SPIDR-212ENST00000519661 SLC15A3Q8IY34 581 aa10.32□□□□□ -0.76
SPIDR-212ENST00000519661 SLC43A2Q8N370 569 aa10.32□□□□□ -0.76
SPIDR-212ENST00000519661 TMCO5AQ8N6Q1 288 aa10.32□□□□□ -0.76
SPIDR-212ENST00000519661 RASSF5Q8WWW0 418 aa10.32□□□□□ -0.76
SPIDR-212ENST00000519661 STARD4Q96DR4 205 aa10.32□□□□□ -0.76
SPIDR-212ENST00000519661 ZNF845Q96IR2 970 aaPredicted RBP10.32□□□□□ -0.76
SPIDR-212ENST00000519661 SLC39A3Q9BRY0 314 aa10.32□□□□□ -0.76
SPIDR-212ENST00000519661 POTEKPQ9BYX7 375 aa10.32□□□□□ -0.76
SPIDR-212ENST00000519661 EFCAB1Q9HAE3 211 aa10.32□□□□□ -0.76
SPIDR-212ENST00000519661 TIGARQ9NQ88 270 aa10.32□□□□□ -0.76
SPIDR-212ENST00000519661 TESQ9UGI8 421 aaKnown RBP10.32□□□□□ -0.76
SPIDR-212ENST00000519661 ING1Q9UK53 422 aaPredicted RBP10.32□□□□□ -0.76
SPIDR-212ENST00000519661 PACSIN3Q9UKS6 424 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms