RNA–Protein interactions for RNA: ENST00000518877.1

PCM1-208, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-208ENST00000518877 CUX2O14529 1486 aa1.26□□□□□ -2.21
PCM1-208ENST00000518877 FAM170AA1A519 330 aa1.26□□□□□ -2.21
PCM1-208ENST00000518877 NKX2-6A6NCS4 301 aa1.26□□□□□ -2.21
PCM1-208ENST00000518877 E9PBE3 544 aa1.26□□□□□ -2.21
PCM1-208ENST00000518877 PES1O00541 588 aaKnown RBP1.26□□□□□ -2.21
PCM1-208ENST00000518877 HCRTR1O43613 425 aa1.26□□□□□ -2.21
PCM1-208ENST00000518877 TPST2O60704 377 aa1.26□□□□□ -2.21
PCM1-208ENST00000518877 KIAA0754O94854 1291 aa1.26□□□□□ -2.21
PCM1-208ENST00000518877 SNAPINO95295 136 aa1.26□□□□□ -2.21
PCM1-208ENST00000518877 GNA14O95837 355 aa1.26□□□□□ -2.21
PCM1-208ENST00000518877 LGI1O95970 557 aa1.26□□□□□ -2.21
PCM1-208ENST00000518877 MBD3O95983 291 aa1.26□□□□□ -2.21
PCM1-208ENST00000518877 PCCBP05166 539 aa1.26□□□□□ -2.21
PCM1-208ENST00000518877 RRASP10301 218 aa1.26□□□□□ -2.21
PCM1-208ENST00000518877 ETS1P14921 441 aa1.26□□□□□ -2.21
PCM1-208ENST00000518877 PAICSP22234 425 aaKnown RBP1.26□□□□□ -2.21
PCM1-208ENST00000518877 PRDX3P30048 256 aaKnown RBP1.26□□□□□ -2.21
PCM1-208ENST00000518877 LEPP41159 167 aa1.26□□□□□ -2.21
PCM1-208ENST00000518877 CSNK1DP48730 415 aa1.26□□□□□ -2.21
PCM1-208ENST00000518877 EFNB2P52799 333 aa1.26□□□□□ -2.21
PCM1-208ENST00000518877 HSPA2P54652 639 aa1.26□□□□□ -2.21
PCM1-208ENST00000518877 EWSR1Q01844 656 aaKnown RBP eCLIP1.26□□□□□ -2.21
PCM1-208ENST00000518877 REG3AQ06141 175 aa1.26□□□□□ -2.21
PCM1-208ENST00000518877 SLC10A7Q0GE19 358 aa1.26□□□□□ -2.21
PCM1-208ENST00000518877 SPP2Q13103 211 aa1.26□□□□□ -2.21
PCM1-208ENST00000518877 GGTLC2Q14390 218 aa1.26□□□□□ -2.21
PCM1-208ENST00000518877 TRIP10Q15642 601 aa1.26□□□□□ -2.21
PCM1-208ENST00000518877 RSPO1Q2MKA7 263 aaPredicted RBP1.26□□□□□ -2.21
PCM1-208ENST00000518877 CCDC57Q2TAC2 916 aa1.26□□□□□ -2.21
PCM1-208ENST00000518877 LINC00483Q53H64 154 aa1.26□□□□□ -2.21
PCM1-208ENST00000518877 C1orf146Q5VVC0 180 aa1.26□□□□□ -2.21
PCM1-208ENST00000518877 FAM71E1Q6IPT2 247 aa1.26□□□□□ -2.21
PCM1-208ENST00000518877 ZSCAN25Q6NSZ9 544 aa1.26□□□□□ -2.21
PCM1-208ENST00000518877 FAHD2BQ6P2I3 314 aaPredicted RBP1.26□□□□□ -2.21
PCM1-208ENST00000518877 Q6ZR03 302 aa1.26□□□□□ -2.21
PCM1-208ENST00000518877 PRSS41Q7RTY9 318 aa1.26□□□□□ -2.21
PCM1-208ENST00000518877 LRRC70Q7Z2Q7 622 aa1.26□□□□□ -2.21
PCM1-208ENST00000518877 MIER3Q7Z3K6 550 aa1.26□□□□□ -2.21
PCM1-208ENST00000518877 NRMQ8IXM6 262 aa1.26□□□□□ -2.21
PCM1-208ENST00000518877 CATSPER1Q8NEC5 780 aa1.26□□□□□ -2.21
PCM1-208ENST00000518877 FAM71CQ8NEG0 241 aa1.26□□□□□ -2.21
PCM1-208ENST00000518877 OR10G2Q8NGC3 310 aa1.26□□□□□ -2.21
PCM1-208ENST00000518877 DNAJA4Q8WW22 397 aaPredicted RBP1.26□□□□□ -2.21
PCM1-208ENST00000518877 PIGCQ92535 297 aa1.26□□□□□ -2.21
PCM1-208ENST00000518877 ARPC1AQ92747 370 aa1.26□□□□□ -2.21
PCM1-208ENST00000518877 ATP6V0A1Q93050 837 aa1.26□□□□□ -2.21
PCM1-208ENST00000518877 UCN3Q969E3 161 aa1.26□□□□□ -2.21
PCM1-208ENST00000518877 FAHD2AQ96GK7 314 aa1.26□□□□□ -2.21
PCM1-208ENST00000518877 CEP170P1Q96L14 293 aa1.26□□□□□ -2.21
PCM1-208ENST00000518877 CCDC43Q96MW1 224 aaKnown RBP1.26□□□□□ -2.21
PCM1-208ENST00000518877 GAL3ST1Q99999 423 aa1.26□□□□□ -2.21
PCM1-208ENST00000518877 HDHD3Q9BSH5 251 aaPredicted RBP1.26□□□□□ -2.21
PCM1-208ENST00000518877 SPATA16Q9BXB7 569 aa1.26□□□□□ -2.21
PCM1-208ENST00000518877 DUSP16Q9BY84 665 aa1.26□□□□□ -2.21
PCM1-208ENST00000518877 CRNKL1Q9BZJ0 848 aaKnown RBP1.26□□□□□ -2.21
PCM1-208ENST00000518877 ATG10Q9H0Y0 220 aa1.26□□□□□ -2.21
PCM1-208ENST00000518877 VCPKMTQ9H867 229 aa1.26□□□□□ -2.21
PCM1-208ENST00000518877 INPP5EQ9NRR6 644 aa1.26□□□□□ -2.21
PCM1-208ENST00000518877 TREM2Q9NZC2 230 aa1.26□□□□□ -2.21
PCM1-208ENST00000518877 BTNL2Q9UIR0 455 aa1.26□□□□□ -2.21
PCM1-208ENST00000518877 TRAPPC4Q9Y296 219 aa1.26□□□□□ -2.21
PCM1-208ENST00000518877 ZNF835Q9Y2P0 537 aa1.26□□□□□ -2.21
PCM1-208ENST00000518877 WIF1Q9Y5W5 379 aa1.26□□□□□ -2.21
PCM1-208ENST00000518877 DOCK9Q9BZ29 2069 aa1.26□□□□□ -2.21
PCM1-208ENST00000518877 PIKFYVEQ9Y2I7 2098 aa1.26□□□□□ -2.21
PCM1-208ENST00000518877 CABIN1Q9Y6J0 2220 aa1.25□□□□□ -2.21
PCM1-208ENST00000518877 GPR179Q6PRD1 2367 aa1.25□□□□□ -2.21
PCM1-208ENST00000518877 IGHV3OR16-13A0A075B7E8 117 aa1.25□□□□□ -2.21
PCM1-208ENST00000518877 FAM230AA0A1W2PPH8 454 aa1.25□□□□□ -2.21
PCM1-208ENST00000518877 PRKYO43930 277 aa1.25□□□□□ -2.21
PCM1-208ENST00000518877 GIPP09681 153 aaPredicted RBP1.25□□□□□ -2.21
PCM1-208ENST00000518877 HLA-DPA1P20036 260 aa1.25□□□□□ -2.21
PCM1-208ENST00000518877 ATP6V1B2P21281 511 aa1.25□□□□□ -2.21
PCM1-208ENST00000518877 OAS2P29728 719 aaKnown RBP1.25□□□□□ -2.21
PCM1-208ENST00000518877 NMT1P30419 496 aaKnown RBP1.25□□□□□ -2.21
PCM1-208ENST00000518877 ADRA1AP35348 466 aa1.25□□□□□ -2.21
PCM1-208ENST00000518877 LONP1P36776 959 aaKnown RBP1.25□□□□□ -2.21
PCM1-208ENST00000518877 PRKXP51817 358 aa1.25□□□□□ -2.21
PCM1-208ENST00000518877 SH3BGRP55822 239 aaPredicted RBP1.25□□□□□ -2.21
PCM1-208ENST00000518877 CCDC173Q0VFZ6 552 aa1.25□□□□□ -2.21
PCM1-208ENST00000518877 WASHC5Q12768 1159 aa1.25□□□□□ -2.21
PCM1-208ENST00000518877 ARFRP1Q13795 201 aa1.25□□□□□ -2.21
PCM1-208ENST00000518877 FAM83EQ2M2I3 478 aa1.25□□□□□ -2.21
PCM1-208ENST00000518877 NSUN5P1Q3KNT7 163 aa1.25□□□□□ -2.21
PCM1-208ENST00000518877 KLF17Q5JT82 389 aaPredicted RBP1.25□□□□□ -2.21
PCM1-208ENST00000518877 RABGAP1LQ5R372 815 aa1.25□□□□□ -2.21
PCM1-208ENST00000518877 C1orf100Q5SVJ3 147 aa1.25□□□□□ -2.21
PCM1-208ENST00000518877 ISLR2Q6UXK2 745 aa1.25□□□□□ -2.21
PCM1-208ENST00000518877 ZNF621Q6ZSS3 439 aa1.25□□□□□ -2.21
PCM1-208ENST00000518877 ACOT7LQ6ZUV0 252 aa1.25□□□□□ -2.21
PCM1-208ENST00000518877 VPS36Q86VN1 386 aa1.25□□□□□ -2.21
PCM1-208ENST00000518877 CBWD2Q8IUF1 395 aa1.25□□□□□ -2.21
PCM1-208ENST00000518877 C12orf56Q8IXR9 622 aa1.25□□□□□ -2.21
PCM1-208ENST00000518877 NPBQ8NG41 125 aa1.25□□□□□ -2.21
PCM1-208ENST00000518877 OR52B4Q8NGK2 314 aa1.25□□□□□ -2.21
PCM1-208ENST00000518877 SLC22A8Q8TCC7 542 aa1.25□□□□□ -2.21
PCM1-208ENST00000518877 MGARPQ8TDB4 240 aa1.25□□□□□ -2.21
PCM1-208ENST00000518877 AENQ8WTP8 325 aaKnown RBP1.25□□□□□ -2.21
PCM1-208ENST00000518877 HPDLQ96IR7 371 aa1.25□□□□□ -2.21
PCM1-208ENST00000518877 TMEM237Q96Q45 408 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms