RNA–Protein interactions for RNA: ENST00000518060.5

SPIDR-205, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SPIDR, Length 482 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-205ENST00000518060 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.41□□□□□ -0.9
SPIDR-205ENST00000518060 AP3D1O14617 1153 aa9.41□□□□□ -0.9
SPIDR-205ENST00000518060 SMAD9O15198 467 aaKnown RBP9.41□□□□□ -0.9
SPIDR-205ENST00000518060 CLOCKO15516 846 aa9.41□□□□□ -0.9
SPIDR-205ENST00000518060 ADAP00813 363 aa9.41□□□□□ -0.9
SPIDR-205ENST00000518060 THBDP07204 575 aa9.41□□□□□ -0.9
SPIDR-205ENST00000518060 CHRM4P08173 479 aa9.41□□□□□ -0.9
SPIDR-205ENST00000518060 IL7RP16871 459 aa9.41□□□□□ -0.9
SPIDR-205ENST00000518060 IDH2P48735 452 aaKnown RBP9.41□□□□□ -0.9
SPIDR-205ENST00000518060 DIO1P49895 249 aa9.41□□□□□ -0.9
SPIDR-205ENST00000518060 SLC18A1P54219 525 aa9.41□□□□□ -0.9
SPIDR-205ENST00000518060 OR2B6P58173 313 aa9.41□□□□□ -0.9
SPIDR-205ENST00000518060 ADAM8P78325 824 aa9.41□□□□□ -0.9
SPIDR-205ENST00000518060 NKX6-1P78426 367 aaPredicted RBP9.41□□□□□ -0.9
SPIDR-205ENST00000518060 KCNJ10P78508 379 aa9.41□□□□□ -0.9
SPIDR-205ENST00000518060 STK11Q15831 433 aa9.41□□□□□ -0.9
SPIDR-205ENST00000518060 ACKR1Q16570 336 aa9.41□□□□□ -0.9
SPIDR-205ENST00000518060 GSTA3Q16772 222 aa9.41□□□□□ -0.9
SPIDR-205ENST00000518060 C22orf34Q6ZV56 151 aa9.41□□□□□ -0.9
SPIDR-205ENST00000518060 GRINAQ7Z429 371 aa9.41□□□□□ -0.9
SPIDR-205ENST00000518060 MAVSQ7Z434 540 aa9.41□□□□□ -0.9
SPIDR-205ENST00000518060 PEX5LQ8IYB4 626 aa9.41□□□□□ -0.9
SPIDR-205ENST00000518060 ZNF100Q8IYN0 542 aa9.41□□□□□ -0.9
SPIDR-205ENST00000518060 UBE2J2Q8N2K1 259 aa9.41□□□□□ -0.9
SPIDR-205ENST00000518060 MIER2Q8N344 545 aa9.41□□□□□ -0.9
SPIDR-205ENST00000518060 GOLGA6L1Q8N7Z2 621 aa9.41□□□□□ -0.9
SPIDR-205ENST00000518060 FAM71CQ8NEG0 241 aa9.41□□□□□ -0.9
SPIDR-205ENST00000518060 OR9I1Q8NGQ6 314 aa9.41□□□□□ -0.9
SPIDR-205ENST00000518060 PIWIL2Q8TC59 973 aaKnown RBP9.41□□□□□ -0.9
SPIDR-205ENST00000518060 LRRC8CQ8TDW0 803 aa9.41□□□□□ -0.9
SPIDR-205ENST00000518060 CNOT9Q92600 299 aaKnown RBP9.41□□□□□ -0.9
SPIDR-205ENST00000518060 ZNF75CPQ92670 426 aaPredicted RBP9.41□□□□□ -0.9
SPIDR-205ENST00000518060 PIGTQ969N2 578 aa9.41□□□□□ -0.9
SPIDR-205ENST00000518060 ZG16BQ96DA0 208 aa9.41□□□□□ -0.9
SPIDR-205ENST00000518060 PERPQ96FX8 193 aa9.41□□□□□ -0.9
SPIDR-205ENST00000518060 PLPPR2Q96GM1 343 aa9.41□□□□□ -0.9
SPIDR-205ENST00000518060 ITCHQ96J02 903 aa9.41□□□□□ -0.9
SPIDR-205ENST00000518060 TRNT1Q96Q11 434 aaKnown RBP9.41□□□□□ -0.9
SPIDR-205ENST00000518060 OR52B2Q96RD2 323 aa9.41□□□□□ -0.9
SPIDR-205ENST00000518060 ZNF300Q96RE9 604 aaPredicted RBP9.41□□□□□ -0.9
SPIDR-205ENST00000518060 TMUB1Q9BVT8 246 aa9.41□□□□□ -0.9
SPIDR-205ENST00000518060 CTPS2Q9NRF8 586 aa9.41□□□□□ -0.9
SPIDR-205ENST00000518060 EMC3Q9P0I2 261 aa9.41□□□□□ -0.9
SPIDR-205ENST00000518060 P2RX2Q9UBL9 471 aa9.41□□□□□ -0.9
SPIDR-205ENST00000518060 CHRNA9Q9UGM1 479 aa9.41□□□□□ -0.9
SPIDR-205ENST00000518060 GPR52Q9Y2T5 361 aa9.41□□□□□ -0.9
SPIDR-205ENST00000518060 USH1CQ9Y6N9 552 aa9.41□□□□□ -0.9
SPIDR-205ENST00000518060 PCNX3Q9H6A9 2034 aa9.41□□□□□ -0.9
SPIDR-205ENST00000518060 PRAMEF27A3QJZ7 478 aa9.4□□□□□ -0.9
SPIDR-205ENST00000518060 TMEM247A6NEH6 219 aa9.4□□□□□ -0.9
SPIDR-205ENST00000518060 AGAP5A6NIR3 686 aa9.4□□□□□ -0.9
SPIDR-205ENST00000518060 POLR3GO15318 223 aaPredicted RBP9.4□□□□□ -0.9
SPIDR-205ENST00000518060 ARHGEF9O43307 516 aa9.4□□□□□ -0.9
SPIDR-205ENST00000518060 LYZL6O75951 148 aa9.4□□□□□ -0.9
SPIDR-205ENST00000518060 BCHEP06276 602 aa9.4□□□□□ -0.9
SPIDR-205ENST00000518060 DBIP07108 87 aaKnown RBP9.4□□□□□ -0.9
SPIDR-205ENST00000518060 ETFAP13804 333 aa9.4□□□□□ -0.9
SPIDR-205ENST00000518060 PSMB1P20618 241 aaKnown RBP9.4□□□□□ -0.9
SPIDR-205ENST00000518060 APOBEC1P41238 236 aaKnown RBP9.4□□□□□ -0.9
SPIDR-205ENST00000518060 POLR2JP52435 117 aaKnown RBP9.4□□□□□ -0.9
SPIDR-205ENST00000518060 NR1H2P55055 460 aa9.4□□□□□ -0.9
SPIDR-205ENST00000518060 TXNL4AP83876 142 aaKnown RBP9.4□□□□□ -0.9
SPIDR-205ENST00000518060 GTDC1Q4AE62 458 aa9.4□□□□□ -0.9
SPIDR-205ENST00000518060 Q5PR19 223 aa9.4□□□□□ -0.9
SPIDR-205ENST00000518060 AGBL2Q5U5Z8 902 aa9.4□□□□□ -0.9
SPIDR-205ENST00000518060 ZNF704Q6ZNC4 412 aaPredicted RBP9.4□□□□□ -0.9
SPIDR-205ENST00000518060 C20orf204Q6ZNR8 217 aa9.4□□□□□ -0.9
SPIDR-205ENST00000518060 LRRC74BQ6ZQY2 392 aa9.4□□□□□ -0.9
SPIDR-205ENST00000518060 TMPPEQ6ZT21 453 aa9.4□□□□□ -0.9
SPIDR-205ENST00000518060 GALNT5Q7Z7M9 940 aa9.4□□□□□ -0.9
SPIDR-205ENST00000518060 LSRQ86X29 649 aaPredicted RBP9.4□□□□□ -0.9
SPIDR-205ENST00000518060 CMIPQ8IY22 773 aa9.4□□□□□ -0.9
SPIDR-205ENST00000518060 CADM2Q8N3J6 435 aa9.4□□□□□ -0.9
SPIDR-205ENST00000518060 OIT3Q8WWZ8 545 aa9.4□□□□□ -0.9
SPIDR-205ENST00000518060 VPS33AQ96AX1 596 aa9.4□□□□□ -0.9
SPIDR-205ENST00000518060 AURKBQ96GD4 344 aaPredicted RBP9.4□□□□□ -0.9
SPIDR-205ENST00000518060 PSD2Q9BQI7 771 aa9.4□□□□□ -0.9
SPIDR-205ENST00000518060 OR11A1Q9GZK7 315 aa9.4□□□□□ -0.9
SPIDR-205ENST00000518060 SAP130Q9H0E3 1048 aa9.4□□□□□ -0.9
SPIDR-205ENST00000518060 GP6Q9HCN6 339 aa9.4□□□□□ -0.9
SPIDR-205ENST00000518060 SLC6A13Q9NSD5 602 aa9.4□□□□□ -0.9
SPIDR-205ENST00000518060 ZIM2Q9NZV7 527 aa9.4□□□□□ -0.9
SPIDR-205ENST00000518060 PRSS50Q9UI38 385 aa9.4□□□□□ -0.9
SPIDR-205ENST00000518060 FLNAP21333 2647 aaKnown RBP9.4□□□□□ -0.9
SPIDR-205ENST00000518060 TMED7-TICAM2A0A0A6YYA0 188 aa9.39□□□□□ -0.91
SPIDR-205ENST00000518060 CFAP73A6NFT4 308 aa9.39□□□□□ -0.91
SPIDR-205ENST00000518060 ETV2O00321 342 aaPredicted RBP9.39□□□□□ -0.91
SPIDR-205ENST00000518060 DYNC1I1O14576 645 aa9.39□□□□□ -0.91
SPIDR-205ENST00000518060 CYTIPO60759 359 aa9.39□□□□□ -0.91
SPIDR-205ENST00000518060 IGHV3-9P01782 118 aa9.39□□□□□ -0.91
SPIDR-205ENST00000518060 GUSBP08236 651 aa9.39□□□□□ -0.91
SPIDR-205ENST00000518060 NCF2P19878 526 aaPredicted RBP9.39□□□□□ -0.91
SPIDR-205ENST00000518060 TACR3P29371 465 aa9.39□□□□□ -0.91
SPIDR-205ENST00000518060 POLR2HP52434 150 aaKnown RBP9.39□□□□□ -0.91
SPIDR-205ENST00000518060 CRISP3P54108 245 aa9.39□□□□□ -0.91
SPIDR-205ENST00000518060 DSTNP60981 165 aa9.39□□□□□ -0.91
SPIDR-205ENST00000518060 LIN52Q52LA3 116 aa9.39□□□□□ -0.91
SPIDR-205ENST00000518060 RPS26P11Q5JNZ5 115 aaPredicted RBP9.39□□□□□ -0.91
SPIDR-205ENST00000518060 SFRP5Q5T4F7 317 aa9.39□□□□□ -0.91
SPIDR-205ENST00000518060 MRPL2Q5T653 305 aaKnown RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms