RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 TBC1D3DA0A087WVF3 549 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 TBC1D3IA0A087WXS9 549 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 TBC1D3EA0A087X179 549 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 TCRBV7S3A2A0A539 114 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 ELOVL7A1L3X0 281 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 FAM171A2A8MVW0 826 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 TBC1D3LB9A6J9 549 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 F8VP50 259 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 FZD9O00144 591 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 GPR31O00270 319 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 SYT5O00445 386 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 OR7A17O14581 309 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 CLIC2O15247 247 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 OGG1O15527 345 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 KCNAB3O43448 404 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 GALR3O60755 368 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 ICOSLGO75144 302 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 STK16O75716 305 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 DFFBO76075 338 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 ENDOD1O94919 500 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 PRAMEF12O95522 483 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 AIFM1O95831 613 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 GLP2RO95838 553 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 SLC25A27O95847 323 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 IFNA21P01568 189 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 PRKCGP05129 697 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 CKMP06732 381 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 UCHL1P09936 223 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 CTXN2P0C2S0 81 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 OR5AC1P0C628 307 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 SCGB1A1P11684 91 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 ZNF37AP17032 561 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 CD82P27701 267 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 PCSK1P29120 753 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 PRDX5P30044 214 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 ARRB2P32121 409 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 CD200P41217 278 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 ACAA2P42765 397 aaKnown RBP4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 ALDH3B1P43353 468 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 PITPNBP48739 271 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 CDC34P49427 236 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 TAF6P49848 677 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 CCR5P51681 352 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 SESN2P58004 480 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 VSX2P58304 361 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 SELENOVP59797 346 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 ERVFC1-1P60608 527 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 SIM1P81133 766 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 HSF1Q00613 529 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 NHLH1Q02575 133 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 HNRNPA0Q13151 305 aaKnown RBP4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 TUSC3Q13454 348 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 TPBGQ13641 420 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 GTF2H2Q13888 395 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 RCAN2Q14206 197 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 GBX1Q14549 363 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 ZNF345Q14585 488 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 SPHARQ15513 63 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 ISXQ2M1V0 245 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 PYCR3Q53H96 274 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 ZRANB3Q5FWF4 1079 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 ELFN2Q5R3F8 820 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 PRR31Q5SQ13 230 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 C10orf120Q5SQS8 335 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 FBXW9Q5XUX1 488 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 ATG9BQ674R7 924 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 ZNF660Q6AZW8 331 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 OR8G2PQ6IF36 304 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 OR10K2Q6IF99 312 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 TBC1D3CQ6IPX1 549 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 SLC30A6Q6NXT4 461 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 GTF2H2CQ6P1K8 395 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 SLC39A4Q6P5W5 647 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 ZCCHC12Q6PEW1 402 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 CNIH2Q6PI25 160 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 TSSK4Q6SA08 328 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 TEPPQ6URK8 271 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 B3GNT9Q6UX72 402 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 ALKAL1Q6UXT8 129 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 GDPD4Q6W3E5 623 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 LANCL3Q6ZV70 420 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 SLC35D2Q76EJ3 337 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 TECPR1Q7Z6L1 1165 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 NUDT13Q86X67 352 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 COMMD2Q86X83 199 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 CBWD2Q8IUF1 395 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 CBLN2Q8IUK8 224 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 CNTN4Q8IWV2 1026 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 TBC1D3Q8IZP1 549 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 ZNF444Q8N0Y2 327 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 LRRC18Q8N456 261 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 FSTL5Q8N475 847 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 COMMD1Q8N668 190 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 MYCT1Q8N699 235 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 DNAJC5GQ8N7S2 189 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 POGLUT1Q8NBL1 392 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 OR2T12Q8NG77 320 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 OR6J1Q8NGC5 347 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 OR1N1Q8NGS0 311 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 OR13C8Q8NGS7 320 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms