RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 HOXC8P31273 242 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 FOXK2Q01167 660 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 RAB11BQ15907 218 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 LRRC37A5PQ49AS3 106 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 KLHL26Q53HC5 615 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 NIPAL3Q6P499 406 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 ZNF765Q7L2R6 523 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 ASPGQ86U10 573 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 RTN4RL1Q86UN2 441 aaPredicted RBP6.2□□□□□ -1.42
CPNE3-203ENST00000517490 GTPBP8Q8N3Z3 284 aaPredicted RBP6.2□□□□□ -1.42
CPNE3-203ENST00000517490 C12orf45Q8N5I9 185 aaPredicted RBP6.2□□□□□ -1.42
CPNE3-203ENST00000517490 TMEM99Q8N816 258 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 ZNF417Q8TAU3 575 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 THEM6Q8WUY1 208 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 TMEM255BQ8WV15 326 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 ARL11Q969Q4 196 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 RAB7BQ96AH8 199 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 TRMT61AQ96FX7 289 aaKnown RBP6.2□□□□□ -1.42
CPNE3-203ENST00000517490 RNF170Q96K19 258 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 SCGB3A2Q96PL1 93 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 PLA2G12AQ9BZM1 189 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 B3GNT4Q9C0J1 378 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 WASH6PQ9NQA3 447 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 DLL4Q9NR61 685 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 SH3BGRL2Q9UJC5 107 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 FARSAQ9Y285 508 aaKnown RBP6.2□□□□□ -1.42
CPNE3-203ENST00000517490 POLR1DQ9Y2S0 133 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 ZNF281Q9Y2X9 895 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 TRAV18A0A075B6X5 111 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 A0A1W2PQ45 241 aaPredicted RBP6.2□□□□□ -1.42
CPNE3-203ENST00000517490 A0A1W2PQY0 241 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 SNRPGP15A8MWD9 76 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 MCIDASD6RGH6 385 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 ZNF593O00488 134 aaPredicted RBP6.2□□□□□ -1.42
CPNE3-203ENST00000517490 HLA-DQB1P01920 261 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 CERS1P27544 350 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 GABRA3P34903 492 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 IRS1P35568 1242 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 OR1Q1Q15612 314 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 SLC35F3Q8IY50 421 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 OR8K3Q8NH51 312 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 LHFPL5Q8TAF8 219 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 HMGB4Q8WW32 186 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 CDS1Q92903 461 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 SCLYQ96I15 445 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 LMLNQ96KR4 655 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 SLC22A12Q96S37 553 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 MRPS18AQ9NVS2 196 aaKnown RBP6.2□□□□□ -1.42
CPNE3-203ENST00000517490 TESQ9UGI8 421 aaKnown RBP6.2□□□□□ -1.42
CPNE3-203ENST00000517490 KCNK6Q9Y257 313 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 EXOGQ9Y2C4 368 aaKnown RBP6.2□□□□□ -1.42
CPNE3-203ENST00000517490 ETV7Q9Y603 341 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 A0A0G2JMZ2 1700 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 LRRC37A2A6NM11 1700 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 CIB4A0PJX0 185 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 D6RAR5 112 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 F8W036 122 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 FFAR1O14842 300 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 CD160O95971 181 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 MAS1P04201 325 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 BLOC1S1P78537 153 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 ACSM1Q08AH1 577 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 EIF2B5Q13144 721 aaKnown RBP6.2□□□□□ -1.42
CPNE3-203ENST00000517490 TEAD2Q15562 447 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 ALG10BQ5I7T1 473 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 C6orf132Q5T0Z8 1188 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 PRSS45Q7RTY3 260 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 ZNF546Q86UE3 836 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 ZNF584Q8IVC4 421 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 SLC43A2Q8N370 569 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 FBXL6Q8N531 539 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 OR10K1Q8NGX5 313 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 SMIM4Q8WVI0 70 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 S100A13Q99584 98 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 TEAD3Q99594 435 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 PRR14Q9BWN1 585 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 SYNPO2LQ9H987 977 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 GRHPRQ9UBQ7 328 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 PPIL1Q9Y3C6 166 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 OR51B4Q9Y5P0 310 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 MCM3APO60318 1980 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 CXorf51AA0A1B0GTR3 108 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 BLOC1S5-TXNDC5H3BN57 136 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 C1QCP02747 245 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 GYPBP06028 91 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 FCER2P06734 321 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 SBK2P0C263 348 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 PTGER1P34995 402 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 LIMS1P48059 325 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 ARL4DP49703 201 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 OR10A3P58181 314 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 RPS15AP62244 130 aaKnown RBP6.2□□□□□ -1.42
CPNE3-203ENST00000517490 SORDQ00796 357 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 ZMYND11Q15326 602 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.2□□□□□ -1.42
CPNE3-203ENST00000517490 ENPP7Q6UWV6 458 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 PARS2Q7L3T8 475 aaKnown RBP6.2□□□□□ -1.42
CPNE3-203ENST00000517490 OLIG3Q7RTU3 272 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 NKAIN4Q8IVV8 208 aa6.2□□□□□ -1.42
CPNE3-203ENST00000517490 CDRT4Q8N9R6 151 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms