RNA–Protein interactions for RNA: ENST00000516428.1

RNU4-54P-201, Transcript of RNA, U4 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU4-54P, Length 129 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-54P-201ENST00000516428 C3orf30Q96M34 536 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 TECTBQ96PL2 329 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 ALS2CR12Q96Q35 445 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 SLC38A2Q96QD8 506 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 XPO6Q96QU8 1125 aaKnown RBP0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 MCCC1Q96RQ3 725 aaPredicted RBP0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 CPXM1Q96SM3 734 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 MBOAT4Q96T53 435 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 NAPGQ99747 312 aaPredicted RBP0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 SLC6A7Q99884 636 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 CTRCQ99895 268 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 AGPAT1Q99943 283 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 P2RY13Q9BPV8 354 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 MAPKAP1Q9BPZ7 522 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 RBM4BQ9BQ04 359 aaKnown RBP0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 C19orf43Q9BQ61 176 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 MACROD1Q9BQ69 325 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 WDR77Q9BQA1 342 aaPredicted RBP0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 NEURL2Q9BR09 285 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 ZNF251Q9BRH9 671 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 PYGO2Q9BRQ0 406 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 NIPSNAP3BQ9BS92 247 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 SYT11Q9BT88 431 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 NAT9Q9BTE0 207 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 URM1Q9BTM9 101 aaKnown RBP0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 LRRC1Q9BTT6 524 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 MCRIP2Q9BUT9 160 aaKnown RBP0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 RBM4Q9BWF3 364 aaKnown RBP0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 CHID1Q9BWS9 393 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 HINT2Q9BX68 163 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 OSBPL10Q9BXB5 764 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 TEKT3Q9BXF9 490 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 DUSP16Q9BY84 665 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 PRRG3Q9BZD7 231 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 ULBP2Q9BZM5 246 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 TRIM15Q9C019 465 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR2B2Q9GZK3 357 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 DERL2Q9GZP9 239 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 MFFQ9GZY8 342 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 DRC3Q9H069 523 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 COMMD4Q9H0A8 199 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 RACGAP1Q9H0H5 632 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 SLITRK2Q9H156 845 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 SLC25A51Q9H1U9 297 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 WDR13Q9H1Z4 485 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 GBA3Q9H227 469 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 PORCNQ9H237 461 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 SYT4Q9H2B2 425 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR51V1Q9H2C8 321 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 ADNPQ9H2P0 1102 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 CPVLQ9H3G5 476 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 PIGUQ9H490 435 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 GOLPH3Q9H4A6 298 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 TUBB1Q9H4B7 451 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 RHOJQ9H4E5 214 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 ANKRD19PQ9H560 264 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 C5orf66Q9H5L9 145 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 ALG9Q9H6U8 611 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 KIR3DX1Q9H7L2 352 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 ZNF665Q9H7R5 613 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 PANK3Q9H999 370 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 ANKRA2Q9H9E1 313 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 NHEJ1Q9H9Q4 299 aaPredicted RBP0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 PLAC1Q9HBJ0 212 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 TMEM165Q9HC07 324 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 S100A14Q9HCY8 104 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 ZNF334Q9HCZ1 680 aaPredicted RBP0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 MRPL47Q9HD33 250 aaKnown RBP0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 CD209Q9NNX6 404 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 VCX3AQ9NNX9 186 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 MLXIPLQ9NP71 852 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 RAB18Q9NP72 206 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 RAB9BQ9NP90 201 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 CCNB1IP1Q9NPC3 277 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 UBE2TQ9NPD8 197 aaPredicted RBP0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 ADAP2Q9NPF8 381 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 SLC52A3Q9NQ40 469 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 ZC4H2Q9NQZ6 224 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 NANSQ9NR45 359 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 TUBG2Q9NRH3 451 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 OLFML3Q9NRN5 406 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 FGF21Q9NSA1 209 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 ZNF275Q9NSD4 429 aaPredicted RBP0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 TREX1Q9NSU2 369 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 STARD5Q9NSY2 213 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 TMEM30AQ9NV96 361 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 TMEM51Q9NW97 253 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 FKBP14Q9NWM8 211 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 GPATCH2LQ9NWQ4 482 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 C2orf42Q9NWW7 574 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 DUS2Q9NX74 493 aaKnown RBP0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 RNF186Q9NXI6 227 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 MRPL39Q9NYK5 338 aaKnown RBP0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 EURLQ9NYK6 297 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 GPR83Q9NYM4 423 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 TECRQ9NZ01 308 aaKnown RBP0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 USE1Q9NZ43 259 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 AHSPQ9NZD4 102 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 PTTG2Q9NZH5 202 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 IL36GQ9NZH8 169 aa0.51□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms