RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 ARFIP1P53367 373 aa-1.8□□□□□ -2.7
RNU6-542P-201ENST00000516405 RPP38P78345 283 aaKnown RBP-1.8□□□□□ -2.7
RNU6-542P-201ENST00000516405 HOXC5Q00444 222 aa-1.8□□□□□ -2.7
RNU6-542P-201ENST00000516405 BIKQ13323 160 aa-1.8□□□□□ -2.7
RNU6-542P-201ENST00000516405 MAD2L1BPQ15013 274 aaPredicted RBP-1.8□□□□□ -2.7
RNU6-542P-201ENST00000516405 GUCA2BQ16661 112 aa-1.8□□□□□ -2.7
RNU6-542P-201ENST00000516405 CBWD6Q4V339 395 aa-1.8□□□□□ -2.7
RNU6-542P-201ENST00000516405 LRRC10Q5BKY1 277 aa-1.8□□□□□ -2.7
RNU6-542P-201ENST00000516405 CBWD3Q5JTY5 395 aa-1.8□□□□□ -2.7
RNU6-542P-201ENST00000516405 FAM222AQ5U5X8 452 aa-1.8□□□□□ -2.7
RNU6-542P-201ENST00000516405 STEAP1BQ6NZ63 245 aa-1.8□□□□□ -2.7
RNU6-542P-201ENST00000516405 PLBD1Q6P4A8 553 aa-1.8□□□□□ -2.7
RNU6-542P-201ENST00000516405 SARM1Q6SZW1 724 aa-1.8□□□□□ -2.7
RNU6-542P-201ENST00000516405 NCCRP1Q6ZVX7 275 aaPredicted RBP-1.8□□□□□ -2.7
RNU6-542P-201ENST00000516405 GPR142Q7Z601 462 aa-1.8□□□□□ -2.7
RNU6-542P-201ENST00000516405 PRPF39Q86UA1 669 aaKnown RBP-1.8□□□□□ -2.7
RNU6-542P-201ENST00000516405 CCDC197Q8NCU1 140 aa-1.8□□□□□ -2.7
RNU6-542P-201ENST00000516405 FANK1Q8TC84 345 aa-1.8□□□□□ -2.7
RNU6-542P-201ENST00000516405 ART4Q93070 314 aa-1.8□□□□□ -2.7
RNU6-542P-201ENST00000516405 ZFP3Q96NJ6 502 aa-1.8□□□□□ -2.7
RNU6-542P-201ENST00000516405 PRMT1Q99873 361 aaKnown RBP-1.8□□□□□ -2.7
RNU6-542P-201ENST00000516405 NACAP1Q9BZK3 213 aa-1.8□□□□□ -2.7
RNU6-542P-201ENST00000516405 RNPEPL1Q9HAU8 725 aa-1.8□□□□□ -2.7
RNU6-542P-201ENST00000516405 STARD5Q9NSY2 213 aa-1.8□□□□□ -2.7
RNU6-542P-201ENST00000516405 SEPT11Q9NVA2 429 aaKnown RBP-1.8□□□□□ -2.7
RNU6-542P-201ENST00000516405 TMEM131Q92545 1883 aa-1.8□□□□□ -2.7
RNU6-542P-201ENST00000516405 NUMA1Q14980 2115 aa-1.81□□□□□ -2.7
RNU6-542P-201ENST00000516405 NUP205Q92621 2012 aa-1.81□□□□□ -2.7
RNU6-542P-201ENST00000516405 PTPN13Q12923 2485 aa-1.81□□□□□ -2.7
RNU6-542P-201ENST00000516405 TRBV7-9A0A0J9YWB2 115 aa-1.81□□□□□ -2.7
RNU6-542P-201ENST00000516405 CCDC162PA2VCL2 907 aa-1.81□□□□□ -2.7
RNU6-542P-201ENST00000516405 CEACAM18A8MTB9 384 aa-1.81□□□□□ -2.7
RNU6-542P-201ENST00000516405 CDRT15L2A8MXV6 281 aa-1.81□□□□□ -2.7
RNU6-542P-201ENST00000516405 D6RAR5 112 aa-1.81□□□□□ -2.7
RNU6-542P-201ENST00000516405 TPST2O60704 377 aa-1.81□□□□□ -2.7
RNU6-542P-201ENST00000516405 CXCL14O95715 111 aa-1.81□□□□□ -2.7
RNU6-542P-201ENST00000516405 P04436 131 aa-1.81□□□□□ -2.7
RNU6-542P-201ENST00000516405 RB1P06400 928 aa-1.81□□□□□ -2.7
RNU6-542P-201ENST00000516405 ZNF30P17039 623 aa-1.81□□□□□ -2.7
RNU6-542P-201ENST00000516405 MTCP1P56278 107 aa-1.81□□□□□ -2.7
RNU6-542P-201ENST00000516405 MC1RQ01726 317 aa-1.81□□□□□ -2.7
RNU6-542P-201ENST00000516405 LIPEQ05469 1076 aa-1.81□□□□□ -2.7
RNU6-542P-201ENST00000516405 SLC34A1Q06495 639 aa-1.81□□□□□ -2.7
RNU6-542P-201ENST00000516405 RAB40BQ12829 278 aa-1.81□□□□□ -2.7
RNU6-542P-201ENST00000516405 SMC1AQ14683 1233 aaKnown RBP-1.81□□□□□ -2.7
RNU6-542P-201ENST00000516405 SLMAPQ14BN4 828 aa-1.81□□□□□ -2.7
RNU6-542P-201ENST00000516405 CEBPEQ15744 281 aa-1.81□□□□□ -2.7
RNU6-542P-201ENST00000516405 C1orf100Q5SVJ3 147 aa-1.81□□□□□ -2.7
RNU6-542P-201ENST00000516405 ANKRD22Q5VYY1 191 aa-1.81□□□□□ -2.7
RNU6-542P-201ENST00000516405 AP1ARQ63HQ0 302 aa-1.81□□□□□ -2.7
RNU6-542P-201ENST00000516405 PRMT9Q6P2P2 845 aa-1.81□□□□□ -2.7
RNU6-542P-201ENST00000516405 KLHL35Q6PF15 583 aa-1.81□□□□□ -2.7
RNU6-542P-201ENST00000516405 ATRAIDQ6UW56 229 aa-1.81□□□□□ -2.7
RNU6-542P-201ENST00000516405 BTNL8Q6UX41 500 aa-1.81□□□□□ -2.7
RNU6-542P-201ENST00000516405 LRRC70Q7Z2Q7 622 aa-1.81□□□□□ -2.7
RNU6-542P-201ENST00000516405 SERPINA9Q86WD7 417 aa-1.81□□□□□ -2.7
RNU6-542P-201ENST00000516405 C17orf64Q86WR6 236 aa-1.81□□□□□ -2.7
RNU6-542P-201ENST00000516405 ZNF101Q8IZC7 436 aa-1.81□□□□□ -2.7
RNU6-542P-201ENST00000516405 SELENOHQ8IZQ5 122 aaKnown RBP-1.81□□□□□ -2.7
RNU6-542P-201ENST00000516405 KDM8Q8N371 416 aa-1.81□□□□□ -2.7
RNU6-542P-201ENST00000516405 OR4F15Q8NGB8 312 aa-1.81□□□□□ -2.7
RNU6-542P-201ENST00000516405 OR4K5Q8NGD3 323 aa-1.81□□□□□ -2.7
RNU6-542P-201ENST00000516405 SHC3Q92529 594 aa-1.81□□□□□ -2.7
RNU6-542P-201ENST00000516405 SEPT8Q92599 483 aa-1.81□□□□□ -2.7
RNU6-542P-201ENST00000516405 DNAJC19Q96DA6 116 aa-1.81□□□□□ -2.7
RNU6-542P-201ENST00000516405 PGAM5Q96HS1 289 aa-1.81□□□□□ -2.7
RNU6-542P-201ENST00000516405 FCRL1Q96LA6 429 aa-1.81□□□□□ -2.7
RNU6-542P-201ENST00000516405 CMTM3Q96MX0 182 aa-1.81□□□□□ -2.7
RNU6-542P-201ENST00000516405 SNX25Q9H3E2 840 aa-1.81□□□□□ -2.7
RNU6-542P-201ENST00000516405 RAB9BQ9NP90 201 aa-1.81□□□□□ -2.7
RNU6-542P-201ENST00000516405 NLRC4Q9NPP4 1024 aa-1.81□□□□□ -2.7
RNU6-542P-201ENST00000516405 TBC1D7Q9P0N9 293 aa-1.81□□□□□ -2.7
RNU6-542P-201ENST00000516405 TUBGCP4Q9UGJ1 667 aa-1.81□□□□□ -2.7
RNU6-542P-201ENST00000516405 SEC63Q9UGP8 760 aaKnown RBP-1.81□□□□□ -2.7
RNU6-542P-201ENST00000516405 RUVBL2Q9Y230 463 aaKnown RBP-1.81□□□□□ -2.7
RNU6-542P-201ENST00000516405 RNF6Q9Y252 685 aa-1.81□□□□□ -2.7
RNU6-542P-201ENST00000516405 U3KQA8 63 aa-1.81□□□□□ -2.7
RNU6-542P-201ENST00000516405 SYNJ2O15056 1496 aa-1.82□□□□□ -2.7
RNU6-542P-201ENST00000516405 ATAD5Q96QE3 1844 aa-1.82□□□□□ -2.7
RNU6-542P-201ENST00000516405 ALMS1Q8TCU4 4167 aa-1.82□□□□□ -2.7
RNU6-542P-201ENST00000516405 NFASCO94856 1347 aa-1.82□□□□□ -2.7
RNU6-542P-201ENST00000516405 GPR75-ASB3A0A0A6YYF3 556 aa-1.82□□□□□ -2.7
RNU6-542P-201ENST00000516405 NPIPA5A0A0B4J1W7 369 aa-1.82□□□□□ -2.7
RNU6-542P-201ENST00000516405 CENPVL3A0A0U1RRI6 287 aa-1.82□□□□□ -2.7
RNU6-542P-201ENST00000516405 ATP6AP2A0A1C7CYW4 349 aa-1.82□□□□□ -2.7
RNU6-542P-201ENST00000516405 ILVBLA1L0T0 632 aa-1.82□□□□□ -2.7
RNU6-542P-201ENST00000516405 GTPBP10A4D1E9 387 aaKnown RBP-1.82□□□□□ -2.7
RNU6-542P-201ENST00000516405 SAGE2PA6NJ88 616 aa-1.82□□□□□ -2.7
RNU6-542P-201ENST00000516405 MYO1GB0I1T2 1018 aa-1.82□□□□□ -2.7
RNU6-542P-201ENST00000516405 C10orf142B7Z368 130 aa-1.82□□□□□ -2.7
RNU6-542P-201ENST00000516405 PEX7O00628 323 aa-1.82□□□□□ -2.7
RNU6-542P-201ENST00000516405 SYNGR2O43760 224 aa-1.82□□□□□ -2.7
RNU6-542P-201ENST00000516405 IGLV7-43P04211 117 aa-1.82□□□□□ -2.7
RNU6-542P-201ENST00000516405 CLTBP09497 229 aa-1.82□□□□□ -2.7
RNU6-542P-201ENST00000516405 LINGO3P0C6S8 592 aa-1.82□□□□□ -2.7
RNU6-542P-201ENST00000516405 ZDHHC11BP0C7U3 371 aa-1.82□□□□□ -2.7
RNU6-542P-201ENST00000516405 HSPA1AP0DMV8 641 aaKnown RBP-1.82□□□□□ -2.7
RNU6-542P-201ENST00000516405 HSPA1BP0DMV9 641 aaKnown RBP-1.82□□□□□ -2.7
RNU6-542P-201ENST00000516405 GALR1P47211 349 aa-1.82□□□□□ -2.7
RNU6-542P-201ENST00000516405 DHPSP49366 369 aaPredicted RBP-1.82□□□□□ -2.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms