RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 OR52P1PQ8NH57 321 aa11.44□□□□□ -0.58
CLCN3-210ENST00000515420 ZNF563Q8TA94 476 aa11.44□□□□□ -0.58
CLCN3-210ENST00000515420 BBS10Q8TAM1 723 aa11.44□□□□□ -0.58
CLCN3-210ENST00000515420 SLC35B4Q969S0 331 aa11.44□□□□□ -0.58
CLCN3-210ENST00000515420 TMEM19Q96HH6 336 aa11.44□□□□□ -0.58
CLCN3-210ENST00000515420 TACO1Q9BSH4 297 aaKnown RBP11.44□□□□□ -0.58
CLCN3-210ENST00000515420 CACYBPQ9HB71 228 aaKnown RBP11.44□□□□□ -0.58
CLCN3-210ENST00000515420 ELOVL5Q9NYP7 299 aa11.44□□□□□ -0.58
CLCN3-210ENST00000515420 CRIM1Q9NZV1 1036 aa11.44□□□□□ -0.58
CLCN3-210ENST00000515420 VAPAQ9P0L0 249 aa11.44□□□□□ -0.58
CLCN3-210ENST00000515420 CHRNA9Q9UGM1 479 aa11.44□□□□□ -0.58
CLCN3-210ENST00000515420 LEF1Q9UJU2 399 aaPredicted RBP11.44□□□□□ -0.58
CLCN3-210ENST00000515420 IFT52Q9Y366 437 aa11.44□□□□□ -0.58
CLCN3-210ENST00000515420 TACC2O95359 2948 aa11.43□□□□□ -0.58
CLCN3-210ENST00000515420 CREBBPQ92793 2442 aa11.43□□□□□ -0.58
CLCN3-210ENST00000515420 FAM221AA4D161 298 aa11.43□□□□□ -0.58
CLCN3-210ENST00000515420 CFAP73A6NFT4 308 aa11.43□□□□□ -0.58
CLCN3-210ENST00000515420 CLDN24A6NM45 220 aa11.43□□□□□ -0.58
CLCN3-210ENST00000515420 EVPLLA8MZ36 301 aa11.43□□□□□ -0.58
CLCN3-210ENST00000515420 SMNDC1O75940 238 aaKnown RBP eCLIP11.43□□□□□ -0.58
CLCN3-210ENST00000515420 ARAFP10398 606 aa11.43□□□□□ -0.58
CLCN3-210ENST00000515420 EPXP11678 715 aa11.43□□□□□ -0.58
CLCN3-210ENST00000515420 CTBP2P56545 445 aa11.43□□□□□ -0.58
CLCN3-210ENST00000515420 CSNK2A1P68400 391 aaPredicted RBP11.43□□□□□ -0.58
CLCN3-210ENST00000515420 EPS8Q12929 822 aa11.43□□□□□ -0.58
CLCN3-210ENST00000515420 DAZAP2Q15038 168 aaPredicted RBP11.43□□□□□ -0.58
CLCN3-210ENST00000515420 SYT14P1Q58G82 188 aa11.43□□□□□ -0.58
CLCN3-210ENST00000515420 DLEU7Q6UYE1 221 aa11.43□□□□□ -0.58
CLCN3-210ENST00000515420 CNOT9Q92600 299 aaKnown RBP11.43□□□□□ -0.58
CLCN3-210ENST00000515420 THOC1Q96FV9 657 aaKnown RBP11.43□□□□□ -0.58
CLCN3-210ENST00000515420 SLC39A3Q9BRY0 314 aa11.43□□□□□ -0.58
CLCN3-210ENST00000515420 SPATA9Q9BWV2 254 aa11.43□□□□□ -0.58
CLCN3-210ENST00000515420 TMEM120AQ9BXJ8 343 aa11.43□□□□□ -0.58
CLCN3-210ENST00000515420 SRXN1Q9BYN0 137 aa11.43□□□□□ -0.58
CLCN3-210ENST00000515420 TMEM38AQ9H6F2 299 aa11.43□□□□□ -0.58
CLCN3-210ENST00000515420 PLSCR4Q9NRQ2 329 aa11.43□□□□□ -0.58
CLCN3-210ENST00000515420 FGFR1OP2Q9NVK5 253 aa11.43□□□□□ -0.58
CLCN3-210ENST00000515420 SLAMF8Q9P0V8 285 aa11.43□□□□□ -0.58
CLCN3-210ENST00000515420 PROCRQ9UNN8 238 aa11.43□□□□□ -0.58
CLCN3-210ENST00000515420 ZNF232Q9UNY5 417 aa11.43□□□□□ -0.58
CLCN3-210ENST00000515420 ZNF443Q9Y2A4 671 aaPredicted RBP11.43□□□□□ -0.58
CLCN3-210ENST00000515420 NDUFAF1Q9Y375 327 aa11.43□□□□□ -0.58
CLCN3-210ENST00000515420 C5orf58C9J3I9 102 aa11.42□□□□□ -0.58
CLCN3-210ENST00000515420 ANGPT2O15123 496 aa11.42□□□□□ -0.58
CLCN3-210ENST00000515420 DNPH1O43598 174 aa11.42□□□□□ -0.58
CLCN3-210ENST00000515420 ADAM11O75078 769 aa11.42□□□□□ -0.58
CLCN3-210ENST00000515420 OPN1LWP04000 364 aa11.42□□□□□ -0.58
CLCN3-210ENST00000515420 RYKP34925 604 aa11.42□□□□□ -0.58
CLCN3-210ENST00000515420 CD79BP40259 229 aa11.42□□□□□ -0.58
CLCN3-210ENST00000515420 SLC1A3P43003 542 aa11.42□□□□□ -0.58
CLCN3-210ENST00000515420 SIRPAP78324 504 aa11.42□□□□□ -0.58
CLCN3-210ENST00000515420 GCNT6Q5T4J0 391 aa11.42□□□□□ -0.58
CLCN3-210ENST00000515420 PPP4R4Q6NUP7 873 aa11.42□□□□□ -0.58
CLCN3-210ENST00000515420 ZNF836Q6ZNA1 936 aa11.42□□□□□ -0.58
CLCN3-210ENST00000515420 TMPPEQ6ZT21 453 aa11.42□□□□□ -0.58
CLCN3-210ENST00000515420 FCRLAQ7L513 359 aa11.42□□□□□ -0.58
CLCN3-210ENST00000515420 ZNF550Q7Z398 422 aa11.42□□□□□ -0.58
CLCN3-210ENST00000515420 DACH2Q96NX9 599 aa11.42□□□□□ -0.58
CLCN3-210ENST00000515420 FANCFQ9NPI8 374 aa11.42□□□□□ -0.58
CLCN3-210ENST00000515420 CTPS2Q9NRF8 586 aa11.42□□□□□ -0.58
CLCN3-210ENST00000515420 HDGFL3Q9Y3E1 203 aa11.42□□□□□ -0.58
CLCN3-210ENST00000515420 PDZD2O15018 2839 aa11.41□□□□□ -0.58
CLCN3-210ENST00000515420 A6NNC1 897 aa11.41□□□□□ -0.58
CLCN3-210ENST00000515420 ZNF208O43345 1280 aa11.41□□□□□ -0.58
CLCN3-210ENST00000515420 CTAG2O75638 210 aa11.41□□□□□ -0.58
CLCN3-210ENST00000515420 PRKD3O94806 890 aa11.41□□□□□ -0.58
CLCN3-210ENST00000515420 PGM3O95394 542 aa11.41□□□□□ -0.58
CLCN3-210ENST00000515420 PMS2P2O95744 297 aa11.41□□□□□ -0.58
CLCN3-210ENST00000515420 VIMP08670 466 aaKnown RBP11.41□□□□□ -0.58
CLCN3-210ENST00000515420 NUDT7P0C024 238 aa11.41□□□□□ -0.58
CLCN3-210ENST00000515420 AGTR1P30556 359 aa11.41□□□□□ -0.58
CLCN3-210ENST00000515420 ADSLP30566 484 aaPredicted RBP11.41□□□□□ -0.58
CLCN3-210ENST00000515420 CPOXP36551 454 aa11.41□□□□□ -0.58
CLCN3-210ENST00000515420 IDH2P48735 452 aaKnown RBP11.41□□□□□ -0.58
CLCN3-210ENST00000515420 DIO1P49895 249 aa11.41□□□□□ -0.58
CLCN3-210ENST00000515420 POLR2HP52434 150 aaKnown RBP11.41□□□□□ -0.58
CLCN3-210ENST00000515420 ARFIP2P53365 341 aa11.41□□□□□ -0.58
CLCN3-210ENST00000515420 GUCY1A3Q02108 690 aa11.41□□□□□ -0.58
CLCN3-210ENST00000515420 RUNDC3AQ59EK9 446 aa11.41□□□□□ -0.58
CLCN3-210ENST00000515420 COQ5Q5HYK3 327 aa11.41□□□□□ -0.58
CLCN3-210ENST00000515420 RPS26P11Q5JNZ5 115 aaPredicted RBP11.41□□□□□ -0.58
CLCN3-210ENST00000515420 REEP3Q6NUK4 255 aa11.41□□□□□ -0.58
CLCN3-210ENST00000515420 ZNF474Q6S9Z5 364 aaPredicted RBP11.41□□□□□ -0.58
CLCN3-210ENST00000515420 HMGN2P46Q86SG4 172 aa11.41□□□□□ -0.58
CLCN3-210ENST00000515420 DHDDSQ86SQ9 333 aa11.41□□□□□ -0.58
CLCN3-210ENST00000515420 VRK2Q86Y07 508 aa11.41□□□□□ -0.58
CLCN3-210ENST00000515420 ADGRG3Q86Y34 549 aa11.41□□□□□ -0.58
CLCN3-210ENST00000515420 KRT73Q86Y46 540 aa11.41□□□□□ -0.58
CLCN3-210ENST00000515420 ZZZ3Q8IYH5 903 aa11.41□□□□□ -0.58
CLCN3-210ENST00000515420 MAL2Q969L2 176 aa11.41□□□□□ -0.58
CLCN3-210ENST00000515420 OR5B2Q96R09 309 aa11.41□□□□□ -0.58
CLCN3-210ENST00000515420 CGREF1Q99674 301 aa11.41□□□□□ -0.58
CLCN3-210ENST00000515420 CPPED1Q9BRF8 314 aaPredicted RBP11.41□□□□□ -0.58
CLCN3-210ENST00000515420 SPATA5L1Q9BVQ7 753 aa11.41□□□□□ -0.58
CLCN3-210ENST00000515420 OPN3Q9H1Y3 402 aaPredicted RBP11.41□□□□□ -0.58
CLCN3-210ENST00000515420 BCO1Q9HAY6 547 aa11.41□□□□□ -0.58
CLCN3-210ENST00000515420 KLHL9Q9P2J3 617 aa11.41□□□□□ -0.58
CLCN3-210ENST00000515420 KLHL13Q9P2N7 655 aa11.41□□□□□ -0.58
CLCN3-210ENST00000515420 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.41□□□□□ -0.58
CLCN3-210ENST00000515420 NDRG3Q9UGV2 375 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms