RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 DPEP1P16444 411 aa11.89□□□□□ -0.51
SMAD1-215ENST00000515385 PAX6P26367 422 aa11.89□□□□□ -0.51
SMAD1-215ENST00000515385 PTGFRP43088 359 aa11.89□□□□□ -0.51
SMAD1-215ENST00000515385 PPIAP62937 165 aaKnown RBP11.89□□□□□ -0.51
SMAD1-215ENST00000515385 ILF3Q12906 894 aaKnown RBP eCLIP11.89□□□□□ -0.51
SMAD1-215ENST00000515385 ERV3-1Q14264 604 aa11.89□□□□□ -0.51
SMAD1-215ENST00000515385 SLBPQ14493 270 aaKnown RBP eCLIP11.89□□□□□ -0.51
SMAD1-215ENST00000515385 EIF2S3LQ2VIR3 472 aaKnown RBP11.89□□□□□ -0.51
SMAD1-215ENST00000515385 ZNF805Q5CZA5 627 aa11.89□□□□□ -0.51
SMAD1-215ENST00000515385 FAM74A1Q5RGS3 127 aa11.89□□□□□ -0.51
SMAD1-215ENST00000515385 PRAMEF8Q5VWM4 474 aa11.89□□□□□ -0.51
SMAD1-215ENST00000515385 PRAMEF7Q5VXH5 474 aa11.89□□□□□ -0.51
SMAD1-215ENST00000515385 MTFR2Q6P444 385 aa11.89□□□□□ -0.51
SMAD1-215ENST00000515385 USP53Q70EK8 1073 aa11.89□□□□□ -0.51
SMAD1-215ENST00000515385 IZUMO1Q8IYV9 350 aa11.89□□□□□ -0.51
SMAD1-215ENST00000515385 RNF113BQ8IZP6 322 aaKnown RBP11.89□□□□□ -0.51
SMAD1-215ENST00000515385 SUN3Q8TAQ9 357 aa11.89□□□□□ -0.51
SMAD1-215ENST00000515385 ACOT11Q8WXI4 607 aaPredicted RBP11.89□□□□□ -0.51
SMAD1-215ENST00000515385 NEIL2Q969S2 332 aa11.89□□□□□ -0.51
SMAD1-215ENST00000515385 S100A16Q96FQ6 103 aaKnown RBP11.89□□□□□ -0.51
SMAD1-215ENST00000515385 ZNF764Q96H86 408 aaPredicted RBP11.89□□□□□ -0.51
SMAD1-215ENST00000515385 NOD1Q9Y239 953 aa11.89□□□□□ -0.51
SMAD1-215ENST00000515385 EFCAB7A8K855 629 aa11.88□□□□□ -0.51
SMAD1-215ENST00000515385 KLF4O43474 513 aa11.88□□□□□ -0.51
SMAD1-215ENST00000515385 BCL2L11O43521 198 aa11.88□□□□□ -0.51
SMAD1-215ENST00000515385 PCDH8O95206 1070 aa11.88□□□□□ -0.51
SMAD1-215ENST00000515385 LATS1O95835 1130 aa11.88□□□□□ -0.51
SMAD1-215ENST00000515385 VSIG10L2P0DP72 767 aa11.88□□□□□ -0.51
SMAD1-215ENST00000515385 GJA1P17302 382 aa11.88□□□□□ -0.51
SMAD1-215ENST00000515385 SDHBP21912 280 aa11.88□□□□□ -0.51
SMAD1-215ENST00000515385 XPAP23025 273 aaPredicted RBP11.88□□□□□ -0.51
SMAD1-215ENST00000515385 VAMP1P23763 118 aa11.88□□□□□ -0.51
SMAD1-215ENST00000515385 DDX6P26196 483 aaKnown RBP eCLIP11.88□□□□□ -0.51
SMAD1-215ENST00000515385 IMPA1P29218 277 aa11.88□□□□□ -0.51
SMAD1-215ENST00000515385 HOXC8P31273 242 aa11.88□□□□□ -0.51
SMAD1-215ENST00000515385 EIF2S3P41091 472 aaKnown RBP11.88□□□□□ -0.51
SMAD1-215ENST00000515385 FRKP42685 505 aaPredicted RBP11.88□□□□□ -0.51
SMAD1-215ENST00000515385 FNTBP49356 437 aa11.88□□□□□ -0.51
SMAD1-215ENST00000515385 HCCSP53701 268 aa11.88□□□□□ -0.51
SMAD1-215ENST00000515385 ACTC1P68032 377 aa11.88□□□□□ -0.51
SMAD1-215ENST00000515385 ACTA1P68133 377 aa11.88□□□□□ -0.51
SMAD1-215ENST00000515385 MELKQ14680 651 aa11.88□□□□□ -0.51
SMAD1-215ENST00000515385 SMCO1Q147U7 214 aa11.88□□□□□ -0.51
SMAD1-215ENST00000515385 SYPL1Q16563 259 aa11.88□□□□□ -0.51
SMAD1-215ENST00000515385 CDNFQ49AH0 187 aa11.88□□□□□ -0.51
SMAD1-215ENST00000515385 CRTC1Q6UUV9 634 aa11.88□□□□□ -0.51
SMAD1-215ENST00000515385 OR2W3Q7Z3T1 314 aa11.88□□□□□ -0.51
SMAD1-215ENST00000515385 ZNF546Q86UE3 836 aa11.88□□□□□ -0.51
SMAD1-215ENST00000515385 COMTD1Q86VU5 262 aa11.88□□□□□ -0.51
SMAD1-215ENST00000515385 OR10H4Q8NGA5 316 aa11.88□□□□□ -0.51
SMAD1-215ENST00000515385 RXFP4Q8TDU9 374 aa11.88□□□□□ -0.51
SMAD1-215ENST00000515385 GHSRQ92847 366 aa11.88□□□□□ -0.51
SMAD1-215ENST00000515385 FAM117AQ9C073 453 aa11.88□□□□□ -0.51
SMAD1-215ENST00000515385 TCF7L1Q9HCS4 588 aa11.88□□□□□ -0.51
SMAD1-215ENST00000515385 NRIP3Q9NQ35 241 aa11.88□□□□□ -0.51
SMAD1-215ENST00000515385 DENND4AQ7Z401 1863 aa11.88□□□□□ -0.51
SMAD1-215ENST00000515385 ABHD14A-ACY1A0A1B0GW23 586 aa11.88□□□□□ -0.51
SMAD1-215ENST00000515385 OR6C74A6NCV1 312 aa11.88□□□□□ -0.51
SMAD1-215ENST00000515385 C5orf52A6NGY3 159 aa11.88□□□□□ -0.51
SMAD1-215ENST00000515385 E9PI62 339 aa11.88□□□□□ -0.51
SMAD1-215ENST00000515385 PYCARD-AS1I3L0S3 204 aa11.88□□□□□ -0.51
SMAD1-215ENST00000515385 MAN2B1O00754 1011 aa11.88□□□□□ -0.51
SMAD1-215ENST00000515385 TBXA2RP21731 343 aa11.88□□□□□ -0.51
SMAD1-215ENST00000515385 PTAFRP25105 342 aa11.88□□□□□ -0.51
SMAD1-215ENST00000515385 BLOC1S1P78537 153 aa11.88□□□□□ -0.51
SMAD1-215ENST00000515385 SORDQ00796 357 aa11.88□□□□□ -0.51
SMAD1-215ENST00000515385 PDZK1IP1Q13113 114 aa11.88□□□□□ -0.51
SMAD1-215ENST00000515385 MLC1Q15049 377 aa11.88□□□□□ -0.51
SMAD1-215ENST00000515385 NDUFAF6Q330K2 333 aa11.88□□□□□ -0.51
SMAD1-215ENST00000515385 ADGRF1Q5T601 910 aa11.88□□□□□ -0.51
SMAD1-215ENST00000515385 C18orf63Q68DL7 685 aa11.88□□□□□ -0.51
SMAD1-215ENST00000515385 FAM199XQ6PEV8 388 aaPredicted RBP11.88□□□□□ -0.51
SMAD1-215ENST00000515385 C16orf59Q7L2K0 433 aa11.88□□□□□ -0.51
SMAD1-215ENST00000515385 SLC16A13Q7RTY0 426 aa11.88□□□□□ -0.51
SMAD1-215ENST00000515385 SLC2A12Q8TD20 617 aa11.88□□□□□ -0.51
SMAD1-215ENST00000515385 CXorf40AQ8TE69 158 aa11.88□□□□□ -0.51
SMAD1-215ENST00000515385 SLC39A7Q92504 469 aa11.88□□□□□ -0.51
SMAD1-215ENST00000515385 EDAQ92838 391 aa11.88□□□□□ -0.51
SMAD1-215ENST00000515385 SLC35G5Q96KT7 338 aa11.88□□□□□ -0.51
SMAD1-215ENST00000515385 SEC11CQ9BY50 192 aa11.88□□□□□ -0.51
SMAD1-215ENST00000515385 ELP3Q9H9T3 547 aa11.88□□□□□ -0.51
SMAD1-215ENST00000515385 SIRT3Q9NTG7 399 aaPredicted RBP11.88□□□□□ -0.51
SMAD1-215ENST00000515385 TDP1Q9NUW8 608 aa11.88□□□□□ -0.51
SMAD1-215ENST00000515385 TAS2R8Q9NYW2 309 aa11.88□□□□□ -0.51
SMAD1-215ENST00000515385 MIOXQ9UGB7 285 aa11.88□□□□□ -0.51
SMAD1-215ENST00000515385 SLC13A4Q9UKG4 626 aa11.88□□□□□ -0.51
SMAD1-215ENST00000515385 MEX3AA1L020 520 aaKnown RBP11.87□□□□□ -0.51
SMAD1-215ENST00000515385 ZNF879B4DU55 563 aa11.87□□□□□ -0.51
SMAD1-215ENST00000515385 OGG1O15527 345 aa11.87□□□□□ -0.51
SMAD1-215ENST00000515385 SEPT4O43236 478 aa11.87□□□□□ -0.51
SMAD1-215ENST00000515385 EPPINO95925 133 aa11.87□□□□□ -0.51
SMAD1-215ENST00000515385 AHRP35869 848 aa11.87□□□□□ -0.51
SMAD1-215ENST00000515385 BUD31P41223 144 aaPredicted RBP11.87□□□□□ -0.51
SMAD1-215ENST00000515385 PTH2RP49190 550 aa11.87□□□□□ -0.51
SMAD1-215ENST00000515385 KHKP50053 298 aa11.87□□□□□ -0.51
SMAD1-215ENST00000515385 P2RX1P51575 399 aa11.87□□□□□ -0.51
SMAD1-215ENST00000515385 SGSHP51688 502 aa11.87□□□□□ -0.51
SMAD1-215ENST00000515385 PGDP52209 483 aa11.87□□□□□ -0.51
SMAD1-215ENST00000515385 PCBP4P57723 403 aaKnown RBP11.87□□□□□ -0.51
SMAD1-215ENST00000515385 CXADRP78310 365 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms