RNA–Protein interactions for RNA: ENST00000514537.5

CLDND1-230, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 1,013 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-230ENST00000514537 TPT1P8Q9HAU6 139 aa20.53■□□□□ 0.88
CLDND1-230ENST00000514537 FANCFQ9NPI8 374 aa20.53■□□□□ 0.88
CLDND1-230ENST00000514537 ANP32DO95626 131 aa20.52■□□□□ 0.88
CLDND1-230ENST00000514537 YES1P07947 543 aa20.52■□□□□ 0.88
CLDND1-230ENST00000514537 IDH3AP50213 366 aa20.52■□□□□ 0.88
CLDND1-230ENST00000514537 TMPPEQ6ZT21 453 aa20.52■□□□□ 0.88
CLDND1-230ENST00000514537 HDXQ7Z353 690 aa20.52■□□□□ 0.88
CLDND1-230ENST00000514537 NUFIP2Q7Z417 695 aaKnown RBP20.52■□□□□ 0.88
CLDND1-230ENST00000514537 GRINAQ7Z429 371 aa20.52■□□□□ 0.88
CLDND1-230ENST00000514537 SLC25A43Q8WUT9 341 aaPredicted RBP20.52■□□□□ 0.88
CLDND1-230ENST00000514537 VPS33AQ96AX1 596 aa20.52■□□□□ 0.88
CLDND1-230ENST00000514537 TCF7L2Q9NQB0 619 aa20.52■□□□□ 0.88
CLDND1-230ENST00000514537 ING1Q9UK53 422 aaPredicted RBP20.52■□□□□ 0.88
CLDND1-230ENST00000514537 IGHV3-15A0A0B4J1V0 119 aa20.51■□□□□ 0.87
CLDND1-230ENST00000514537 PPP3CBP16298 524 aa20.51■□□□□ 0.87
CLDND1-230ENST00000514537 KEAP1Q14145 624 aa20.51■□□□□ 0.87
CLDND1-230ENST00000514537 GTDC1Q4AE62 458 aa20.51■□□□□ 0.87
CLDND1-230ENST00000514537 SYT14P1Q58G82 188 aa20.51■□□□□ 0.87
CLDND1-230ENST00000514537 GTF2H4Q92759 462 aa20.51■□□□□ 0.87
CLDND1-230ENST00000514537 ZC3HAV1LQ96H79 300 aaKnown RBP20.51■□□□□ 0.87
CLDND1-230ENST00000514537 ALPK1Q96QP1 1244 aa20.51■□□□□ 0.87
CLDND1-230ENST00000514537 TACO1Q9BSH4 297 aaKnown RBP20.51■□□□□ 0.87
CLDND1-230ENST00000514537 BCO1Q9HAY6 547 aa20.51■□□□□ 0.87
CLDND1-230ENST00000514537 CTPS2Q9NRF8 586 aa20.51■□□□□ 0.87
CLDND1-230ENST00000514537 SMAD9O15198 467 aaKnown RBP20.5■□□□□ 0.87
CLDND1-230ENST00000514537 POLR3GO15318 223 aaPredicted RBP20.5■□□□□ 0.87
CLDND1-230ENST00000514537 DBIP07108 87 aaKnown RBP20.5■□□□□ 0.87
CLDND1-230ENST00000514537 THBDP07204 575 aa20.5■□□□□ 0.87
CLDND1-230ENST00000514537 TFPTP0C1Z6 253 aa20.5■□□□□ 0.87
CLDND1-230ENST00000514537 ETFAP13804 333 aa20.5■□□□□ 0.87
CLDND1-230ENST00000514537 IL7RP16871 459 aa20.5■□□□□ 0.87
CLDND1-230ENST00000514537 PSMB1P20618 241 aaKnown RBP20.5■□□□□ 0.87
CLDND1-230ENST00000514537 CRATP43155 626 aa20.5■□□□□ 0.87
CLDND1-230ENST00000514537 IDH2P48735 452 aaKnown RBP20.5■□□□□ 0.87
CLDND1-230ENST00000514537 DIO1P49895 249 aa20.5■□□□□ 0.87
CLDND1-230ENST00000514537 GNA13Q14344 377 aa20.5■□□□□ 0.87
CLDND1-230ENST00000514537 TFAP2EQ6VUC0 442 aa20.5■□□□□ 0.87
CLDND1-230ENST00000514537 ADGRG3Q86Y34 549 aa20.5■□□□□ 0.87
CLDND1-230ENST00000514537 WDR60Q8WVS4 1066 aa20.5■□□□□ 0.87
CLDND1-230ENST00000514537 PIK3IP1Q96FE7 263 aa20.5■□□□□ 0.87
CLDND1-230ENST00000514537 AURKBQ96GD4 344 aaPredicted RBP20.5■□□□□ 0.87
CLDND1-230ENST00000514537 PSD2Q9BQI7 771 aa20.5■□□□□ 0.87
CLDND1-230ENST00000514537 EBF4Q9BQW3 602 aa20.5■□□□□ 0.87
CLDND1-230ENST00000514537 CCDC28BQ9BUN5 200 aa20.5■□□□□ 0.87
CLDND1-230ENST00000514537 OR10A4Q9H209 315 aa20.5■□□□□ 0.87
CLDND1-230ENST00000514537 VIPAS39Q9H9C1 493 aa20.5■□□□□ 0.87
CLDND1-230ENST00000514537 KLHL9Q9P2J3 617 aa20.5■□□□□ 0.87
CLDND1-230ENST00000514537 P2RX2Q9UBL9 471 aa20.5■□□□□ 0.87
CLDND1-230ENST00000514537 CHRNA9Q9UGM1 479 aa20.5■□□□□ 0.87
CLDND1-230ENST00000514537 GPR52Q9Y2T5 361 aa20.5■□□□□ 0.87
CLDND1-230ENST00000514537 SPIN1Q9Y657 262 aaPredicted RBP20.5■□□□□ 0.87
CLDND1-230ENST00000514537 HMGB1P1B2RPK0 211 aaPredicted RBP20.49■□□□□ 0.87
CLDND1-230ENST00000514537 CYTIPO60759 359 aa20.49■□□□□ 0.87
CLDND1-230ENST00000514537 H2AFXP16104 143 aaPredicted RBP20.49■□□□□ 0.87
CLDND1-230ENST00000514537 KLK2P20151 261 aa20.49■□□□□ 0.87
CLDND1-230ENST00000514537 FKBP2P26885 142 aaKnown RBP20.49■□□□□ 0.87
CLDND1-230ENST00000514537 LOXP28300 417 aaPredicted RBP20.49■□□□□ 0.87
CLDND1-230ENST00000514537 STX1BP61266 288 aa20.49■□□□□ 0.87
CLDND1-230ENST00000514537 C6orf10Q5SRN2 563 aa20.49■□□□□ 0.87
CLDND1-230ENST00000514537 PEX5LQ8IYB4 626 aa20.49■□□□□ 0.87
CLDND1-230ENST00000514537 GABRG1Q8N1C3 465 aa20.49■□□□□ 0.87
CLDND1-230ENST00000514537 SLC38A5Q8WUX1 472 aa20.49■□□□□ 0.87
CLDND1-230ENST00000514537 DYDC1Q8WWB3 177 aa20.49■□□□□ 0.87
CLDND1-230ENST00000514537 CALML5Q9NZT1 146 aa20.49■□□□□ 0.87
CLDND1-230ENST00000514537 PCDHB14Q9Y5E9 798 aa20.49■□□□□ 0.87
CLDND1-230ENST00000514537 DSPPQ9NZW4 1301 aa20.49■□□□□ 0.87
CLDND1-230ENST00000514537 MED13LQ71F56 2210 aa20.48■□□□□ 0.87
CLDND1-230ENST00000514537 SULT2B1O00204 365 aa20.48■□□□□ 0.87
CLDND1-230ENST00000514537 FAAHO00519 579 aa20.48■□□□□ 0.87
CLDND1-230ENST00000514537 AP3D1O14617 1153 aa20.48■□□□□ 0.87
CLDND1-230ENST00000514537 GCM2O75603 506 aaPredicted RBP20.48■□□□□ 0.87
CLDND1-230ENST00000514537 CD53P19397 219 aa20.48■□□□□ 0.87
CLDND1-230ENST00000514537 HTR3AP46098 478 aa20.48■□□□□ 0.87
CLDND1-230ENST00000514537 CLK1P49759 484 aaKnown RBP20.48■□□□□ 0.87
CLDND1-230ENST00000514537 CRISP3P54108 245 aa20.48■□□□□ 0.87
CLDND1-230ENST00000514537 AQP5P55064 265 aa20.48■□□□□ 0.87
CLDND1-230ENST00000514537 DSTNP60981 165 aa20.48■□□□□ 0.87
CLDND1-230ENST00000514537 CSNK2A1P68400 391 aaPredicted RBP20.48■□□□□ 0.87
CLDND1-230ENST00000514537 RASGEF1BQ0VAM2 473 aa20.48■□□□□ 0.87
CLDND1-230ENST00000514537 DEFB113Q30KQ7 82 aa20.48■□□□□ 0.87
CLDND1-230ENST00000514537 MRPL2Q5T653 305 aaKnown RBP20.48■□□□□ 0.87
CLDND1-230ENST00000514537 SLC2A7Q6PXP3 512 aa20.48■□□□□ 0.87
CLDND1-230ENST00000514537 FUNDC1Q8IVP5 155 aa20.48■□□□□ 0.87
CLDND1-230ENST00000514537 GOLGA6L1Q8N7Z2 621 aa20.48■□□□□ 0.87
CLDND1-230ENST00000514537 HDHD5Q9BXW7 423 aa20.48■□□□□ 0.87
CLDND1-230ENST00000514537 PAIP1Q9H074 479 aaKnown RBP20.48■□□□□ 0.87
CLDND1-230ENST00000514537 INTS9Q9NV88 658 aaKnown RBP20.48■□□□□ 0.87
CLDND1-230ENST00000514537 ARGLU1Q9NWB6 273 aaPredicted RBP20.48■□□□□ 0.87
CLDND1-230ENST00000514537 THUMPD1Q9NXG2 353 aaKnown RBP20.48■□□□□ 0.87
CLDND1-230ENST00000514537 HDGFL3Q9Y3E1 203 aa20.48■□□□□ 0.87
CLDND1-230ENST00000514537 MTORP42345 2549 aa20.48■□□□□ 0.87
CLDND1-230ENST00000514537 TFPIP10646 304 aa20.47■□□□□ 0.87
CLDND1-230ENST00000514537 HOXB9P17482 250 aaPredicted RBP20.47■□□□□ 0.87
CLDND1-230ENST00000514537 PPP2R2AP63151 447 aa20.47■□□□□ 0.87
CLDND1-230ENST00000514537 EPS8Q12929 822 aa20.47■□□□□ 0.87
CLDND1-230ENST00000514537 BLOC1S3Q6QNY0 202 aa20.47■□□□□ 0.87
CLDND1-230ENST00000514537 MTDHQ86UE4 582 aaKnown RBP20.47■□□□□ 0.87
CLDND1-230ENST00000514537 CXorf67Q86X51 503 aaPredicted RBP20.47■□□□□ 0.87
CLDND1-230ENST00000514537 OR52P1PQ8NH57 321 aa20.47■□□□□ 0.87
CLDND1-230ENST00000514537 ARL5BQ96KC2 179 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms