RNA–Protein interactions for RNA: ENST00000514313.1

NUP54-215, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-215ENST00000514313 CIB2O75838 187 aa5.63□□□□□ -1.51
NUP54-215ENST00000514313 CABYRO75952 493 aa5.63□□□□□ -1.51
NUP54-215ENST00000514313 ATP5LO75964 103 aa5.63□□□□□ -1.51
NUP54-215ENST00000514313 GCFC2P16383 781 aaKnown RBP5.63□□□□□ -1.51
NUP54-215ENST00000514313 YWHABP31946 246 aaKnown RBP5.63□□□□□ -1.51
NUP54-215ENST00000514313 EPHX2P34913 555 aa5.63□□□□□ -1.51
NUP54-215ENST00000514313 QARSP47897 775 aaKnown RBP5.63□□□□□ -1.51
NUP54-215ENST00000514313 DAP3P51398 398 aaKnown RBP5.63□□□□□ -1.51
NUP54-215ENST00000514313 RPS14P62263 151 aaKnown RBP5.63□□□□□ -1.51
NUP54-215ENST00000514313 SLC15A2Q16348 729 aa5.63□□□□□ -1.51
NUP54-215ENST00000514313 TIMM50Q3ZCQ8 353 aa5.63□□□□□ -1.51
NUP54-215ENST00000514313 DMRTC1Q5HYR2 192 aa5.63□□□□□ -1.51
NUP54-215ENST00000514313 C1orf220Q5T0J3 134 aa5.63□□□□□ -1.51
NUP54-215ENST00000514313 C2orf66Q6UXQ4 117 aa5.63□□□□□ -1.51
NUP54-215ENST00000514313 OR9K2Q8NGE7 335 aa5.63□□□□□ -1.51
NUP54-215ENST00000514313 PAQR8Q8TEZ7 354 aa5.63□□□□□ -1.51
NUP54-215ENST00000514313 GTSF1Q8WW33 167 aa5.63□□□□□ -1.51
NUP54-215ENST00000514313 EFHD2Q96C19 240 aaPredicted RBP5.63□□□□□ -1.51
NUP54-215ENST00000514313 GPR61Q9BZJ8 451 aa5.63□□□□□ -1.51
NUP54-215ENST00000514313 CHIAQ9BZP6 476 aa5.63□□□□□ -1.51
NUP54-215ENST00000514313 PKIBQ9C010 78 aa5.63□□□□□ -1.51
NUP54-215ENST00000514313 NUDT15Q9NV35 164 aa5.63□□□□□ -1.51
NUP54-215ENST00000514313 PHF11Q9UIL8 331 aa5.63□□□□□ -1.51
NUP54-215ENST00000514313 CACNA1FO60840 1977 aa5.63□□□□□ -1.51
NUP54-215ENST00000514313 ANKRD30BQ9BXX2 1392 aa5.63□□□□□ -1.51
NUP54-215ENST00000514313 CLDN9O95484 217 aa5.62□□□□□ -1.51
NUP54-215ENST00000514313 TOP1P11387 765 aaKnown RBP5.62□□□□□ -1.51
NUP54-215ENST00000514313 CCR1P32246 355 aa5.62□□□□□ -1.51
NUP54-215ENST00000514313 TPMTP51580 245 aa5.62□□□□□ -1.51
NUP54-215ENST00000514313 CD47Q08722 323 aa5.62□□□□□ -1.51
NUP54-215ENST00000514313 ASAH1Q13510 395 aa5.62□□□□□ -1.51
NUP54-215ENST00000514313 PAN3Q58A45 887 aaKnown RBP5.62□□□□□ -1.51
NUP54-215ENST00000514313 SLC22A10Q63ZE4 541 aa5.62□□□□□ -1.51
NUP54-215ENST00000514313 CDR2LQ86X02 465 aaPredicted RBP5.62□□□□□ -1.51
NUP54-215ENST00000514313 FAM83FQ8NEG4 500 aaPredicted RBP5.62□□□□□ -1.51
NUP54-215ENST00000514313 MRPS31Q92665 395 aaKnown RBP5.62□□□□□ -1.51
NUP54-215ENST00000514313 TBX15Q96SF7 602 aa5.62□□□□□ -1.51
NUP54-215ENST00000514313 SMYD3Q9H7B4 428 aa5.62□□□□□ -1.51
NUP54-215ENST00000514313 NSD2O96028 1365 aa5.62□□□□□ -1.51
NUP54-215ENST00000514313 HCFC1P51610 2035 aa5.62□□□□□ -1.51
NUP54-215ENST00000514313 RALGAPA1Q6GYQ0 2036 aa5.62□□□□□ -1.51
NUP54-215ENST00000514313 A0A1B0GUS0 222 aa5.61□□□□□ -1.51
NUP54-215ENST00000514313 A0A1B0GWB2 263 aa5.61□□□□□ -1.51
NUP54-215ENST00000514313 PFKFB2O60825 505 aa5.61□□□□□ -1.51
NUP54-215ENST00000514313 GNA11P29992 359 aa5.61□□□□□ -1.51
NUP54-215ENST00000514313 GCKP35557 465 aa5.61□□□□□ -1.51
NUP54-215ENST00000514313 SLC25A1P53007 311 aa5.61□□□□□ -1.51
NUP54-215ENST00000514313 LMO4P61968 165 aa5.61□□□□□ -1.51
NUP54-215ENST00000514313 VGLL4Q14135 290 aa5.61□□□□□ -1.51
NUP54-215ENST00000514313 IMMTQ16891 758 aaKnown RBP5.61□□□□□ -1.51
NUP54-215ENST00000514313 KLHL38Q2WGJ6 581 aa5.61□□□□□ -1.51
NUP54-215ENST00000514313 C6orf226Q5I0X4 101 aa5.61□□□□□ -1.51
NUP54-215ENST00000514313 KDM7AQ6ZMT4 941 aa5.61□□□□□ -1.51
NUP54-215ENST00000514313 TRIM69Q86WT6 500 aa5.61□□□□□ -1.51
NUP54-215ENST00000514313 TGIF2LXQ8IUE1 241 aa5.61□□□□□ -1.51
NUP54-215ENST00000514313 OR2A12Q8NGT7 310 aa5.61□□□□□ -1.51
NUP54-215ENST00000514313 OR2L2Q8NH16 312 aa5.61□□□□□ -1.51
NUP54-215ENST00000514313 FAM110BQ8TC76 370 aa5.61□□□□□ -1.51
NUP54-215ENST00000514313 SNED1Q8TER0 1413 aa5.61□□□□□ -1.51
NUP54-215ENST00000514313 RASD2Q96D21 266 aa5.61□□□□□ -1.51
NUP54-215ENST00000514313 PLIN2Q99541 437 aa5.61□□□□□ -1.51
NUP54-215ENST00000514313 OR1A1Q9P1Q5 309 aa5.61□□□□□ -1.51
NUP54-215ENST00000514313 A0A1B0GU03 582 aa5.6□□□□□ -1.51
NUP54-215ENST00000514313 SMIM28A0A1B0GU29 152 aa5.6□□□□□ -1.51
NUP54-215ENST00000514313 DHRS7CA6NNS2 312 aa5.6□□□□□ -1.51
NUP54-215ENST00000514313 E7ESA3 106 aa5.6□□□□□ -1.51
NUP54-215ENST00000514313 HCN1O60741 890 aa5.6□□□□□ -1.51
NUP54-215ENST00000514313 LYPD3O95274 346 aa5.6□□□□□ -1.51
NUP54-215ENST00000514313 STSP08842 583 aa5.6□□□□□ -1.51
NUP54-215ENST00000514313 ETS2P15036 469 aa5.6□□□□□ -1.51
NUP54-215ENST00000514313 VDAC1P21796 283 aa5.6□□□□□ -1.51
NUP54-215ENST00000514313 SLC8A3P57103 927 aa5.6□□□□□ -1.51
NUP54-215ENST00000514313 CDK16Q00536 496 aa5.6□□□□□ -1.51
NUP54-215ENST00000514313 IDI1Q13907 227 aa5.6□□□□□ -1.51
NUP54-215ENST00000514313 SSX2Q16385 188 aa5.6□□□□□ -1.51
NUP54-215ENST00000514313 LPAL2Q16609 132 aa5.6□□□□□ -1.51
NUP54-215ENST00000514313 HIGD2BQ4VC39 106 aa5.6□□□□□ -1.51
NUP54-215ENST00000514313 OR5M10Q6IEU7 315 aa5.6□□□□□ -1.51
NUP54-215ENST00000514313 CCDC137Q6PK04 289 aaKnown RBP5.6□□□□□ -1.51
NUP54-215ENST00000514313 EGFL6Q8IUX8 553 aa5.6□□□□□ -1.51
NUP54-215ENST00000514313 TRPV1Q8NER1 839 aa5.6□□□□□ -1.51
NUP54-215ENST00000514313 OR56B4Q8NH76 319 aa5.6□□□□□ -1.51
NUP54-215ENST00000514313 MAGEE2Q8TD90 523 aaPredicted RBP5.6□□□□□ -1.51
NUP54-215ENST00000514313 SLC2A14Q8TDB8 520 aa5.6□□□□□ -1.51
NUP54-215ENST00000514313 TCTEX1D2Q8WW35 142 aa5.6□□□□□ -1.51
NUP54-215ENST00000514313 UBE2E3Q969T4 207 aa5.6□□□□□ -1.51
NUP54-215ENST00000514313 HAVCR1Q96D42 359 aa5.6□□□□□ -1.51
NUP54-215ENST00000514313 NAF1Q96HR8 494 aaKnown RBP5.6□□□□□ -1.51
NUP54-215ENST00000514313 ZFP14Q9HCL3 533 aa5.6□□□□□ -1.51
NUP54-215ENST00000514313 NPTNQ9Y639 398 aa5.6□□□□□ -1.51
NUP54-215ENST00000514313 HAS3O00219 553 aa5.59□□□□□ -1.51
NUP54-215ENST00000514313 CRLF1O75462 422 aa5.59□□□□□ -1.51
NUP54-215ENST00000514313 LGALS2P05162 132 aa5.59□□□□□ -1.51
NUP54-215ENST00000514313 ATP1B2P14415 290 aaPredicted RBP5.59□□□□□ -1.51
NUP54-215ENST00000514313 COX5AP20674 150 aa5.59□□□□□ -1.51
NUP54-215ENST00000514313 HOXD10P28358 340 aa5.59□□□□□ -1.51
NUP54-215ENST00000514313 EPS15P42566 896 aa5.59□□□□□ -1.51
NUP54-215ENST00000514313 VEGFCP49767 419 aa5.59□□□□□ -1.51
NUP54-215ENST00000514313 CRYBB1P53674 252 aaPredicted RBP5.59□□□□□ -1.51
NUP54-215ENST00000514313 PRMT2P55345 433 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms