RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 hCG_1807616A0A1W2PRN6 198 aa6.84□□□□□ -1.31
CLIP1-205ENST00000514271 PQLC2LA1A4F0 135 aa6.84□□□□□ -1.31
CLIP1-205ENST00000514271 HMSDA8MTL9 139 aa6.84□□□□□ -1.31
CLIP1-205ENST00000514271 FAM157AC9JC47 383 aa6.84□□□□□ -1.31
CLIP1-205ENST00000514271 ZGLP1P0C6A0 271 aa6.84□□□□□ -1.31
CLIP1-205ENST00000514271 PAX1P15863 534 aa6.84□□□□□ -1.31
CLIP1-205ENST00000514271 TIA1P31483 386 aaKnown RBP eCLIP6.84□□□□□ -1.31
CLIP1-205ENST00000514271 RAB25P57735 213 aa6.84□□□□□ -1.31
CLIP1-205ENST00000514271 CLDN2P57739 230 aa6.84□□□□□ -1.31
CLIP1-205ENST00000514271 DDI2Q5TDH0 399 aa6.84□□□□□ -1.31
CLIP1-205ENST00000514271 METRNLQ641Q3 311 aa6.84□□□□□ -1.31
CLIP1-205ENST00000514271 LRFN4Q6PJG9 635 aa6.84□□□□□ -1.31
CLIP1-205ENST00000514271 BCDIN3DQ7Z5W3 292 aaKnown RBP6.84□□□□□ -1.31
CLIP1-205ENST00000514271 TAF8Q7Z7C8 310 aa6.84□□□□□ -1.31
CLIP1-205ENST00000514271 LRRC28Q86X40 367 aaPredicted RBP6.84□□□□□ -1.31
CLIP1-205ENST00000514271 KMT5CQ86Y97 462 aa6.84□□□□□ -1.31
CLIP1-205ENST00000514271 Q8N402 240 aa6.84□□□□□ -1.31
CLIP1-205ENST00000514271 STPG2Q8N412 459 aa6.84□□□□□ -1.31
CLIP1-205ENST00000514271 BVESQ8NE79 360 aa6.84□□□□□ -1.31
CLIP1-205ENST00000514271 LMX1AQ8TE12 382 aa6.84□□□□□ -1.31
CLIP1-205ENST00000514271 DIO2Q92813 273 aa6.84□□□□□ -1.31
CLIP1-205ENST00000514271 ZNF354BQ96LW1 612 aa6.84□□□□□ -1.31
CLIP1-205ENST00000514271 ZBTB18Q99592 522 aa6.84□□□□□ -1.31
CLIP1-205ENST00000514271 DUSP26Q9BV47 211 aa6.84□□□□□ -1.31
CLIP1-205ENST00000514271 CHRNA10Q9GZZ6 450 aa6.84□□□□□ -1.31
CLIP1-205ENST00000514271 ACKR4Q9NPB9 350 aa6.84□□□□□ -1.31
CLIP1-205ENST00000514271 NUBP2Q9Y5Y2 271 aa6.84□□□□□ -1.31
CLIP1-205ENST00000514271 A0A1B0GVI7 797 aa6.84□□□□□ -1.32
CLIP1-205ENST00000514271 CDRT1O95170 752 aa6.84□□□□□ -1.32
CLIP1-205ENST00000514271 MAOBP27338 520 aa6.84□□□□□ -1.32
CLIP1-205ENST00000514271 UAP1L1Q3KQV9 507 aa6.84□□□□□ -1.32
CLIP1-205ENST00000514271 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.84□□□□□ -1.32
CLIP1-205ENST00000514271 NLRC3Q7RTR2 1065 aa6.84□□□□□ -1.32
CLIP1-205ENST00000514271 C11orf65Q8NCR3 313 aa6.84□□□□□ -1.32
CLIP1-205ENST00000514271 KLK6Q92876 244 aa6.84□□□□□ -1.32
CLIP1-205ENST00000514271 NINJ1Q92982 152 aa6.84□□□□□ -1.32
CLIP1-205ENST00000514271 SCAMP4Q969E2 229 aa6.84□□□□□ -1.32
CLIP1-205ENST00000514271 C7orf50Q9BRJ6 194 aaKnown RBP6.84□□□□□ -1.32
CLIP1-205ENST00000514271 BEX2Q9BXY8 128 aa6.84□□□□□ -1.32
CLIP1-205ENST00000514271 SMOC1Q9H4F8 434 aa6.84□□□□□ -1.32
CLIP1-205ENST00000514271 KIR3DX1Q9H7L2 352 aa6.84□□□□□ -1.32
CLIP1-205ENST00000514271 RNF122Q9H9V4 155 aa6.84□□□□□ -1.32
CLIP1-205ENST00000514271 SEMA3GQ9NS98 782 aa6.84□□□□□ -1.32
CLIP1-205ENST00000514271 IMP3Q9NV31 184 aaKnown RBP6.84□□□□□ -1.32
CLIP1-205ENST00000514271 SLC39A1Q9NY26 324 aa6.84□□□□□ -1.32
CLIP1-205ENST00000514271 COQ3Q9NZJ6 369 aa6.84□□□□□ -1.32
CLIP1-205ENST00000514271 AKAP7Q9P0M2 348 aaPredicted RBP6.84□□□□□ -1.32
CLIP1-205ENST00000514271 ENTPD2Q9Y5L3 495 aa6.84□□□□□ -1.32
CLIP1-205ENST00000514271 TRAV1-2A0A0B4J238 106 aa6.83□□□□□ -1.32
CLIP1-205ENST00000514271 LOC100506127A0A0U1RQW1 187 aa6.83□□□□□ -1.32
CLIP1-205ENST00000514271 FABP12A6NFH5 140 aa6.83□□□□□ -1.32
CLIP1-205ENST00000514271 C4orf47A7E2U8 309 aa6.83□□□□□ -1.32
CLIP1-205ENST00000514271 LINC01387J3KSC0 135 aa6.83□□□□□ -1.32
CLIP1-205ENST00000514271 K7ESM1 405 aa6.83□□□□□ -1.32
CLIP1-205ENST00000514271 GABRPO00591 440 aa6.83□□□□□ -1.32
CLIP1-205ENST00000514271 ST8SIA5O15466 376 aa6.83□□□□□ -1.32
CLIP1-205ENST00000514271 PRODHO43272 600 aa6.83□□□□□ -1.32
CLIP1-205ENST00000514271 FOXS1O43638 330 aa6.83□□□□□ -1.32
CLIP1-205ENST00000514271 SERPIND1P05546 499 aa6.83□□□□□ -1.32
CLIP1-205ENST00000514271 ADRB1P08588 477 aa6.83□□□□□ -1.32
CLIP1-205ENST00000514271 SLC35G4P0C7Q5 338 aa6.83□□□□□ -1.32
CLIP1-205ENST00000514271 PF4V1P10720 104 aa6.83□□□□□ -1.32
CLIP1-205ENST00000514271 RNF144AP50876 292 aaPredicted RBP6.83□□□□□ -1.32
CLIP1-205ENST00000514271 GGTLC2Q14390 218 aa6.83□□□□□ -1.32
CLIP1-205ENST00000514271 ARHGAP19Q14CB8 494 aa6.83□□□□□ -1.32
CLIP1-205ENST00000514271 ZNF674Q2M3X9 581 aa6.83□□□□□ -1.32
CLIP1-205ENST00000514271 Q3ZCU0 254 aa6.83□□□□□ -1.32
CLIP1-205ENST00000514271 SP5Q6BEB4 398 aaPredicted RBP6.83□□□□□ -1.32
CLIP1-205ENST00000514271 PTRHD1Q6GMV3 140 aaKnown RBP6.83□□□□□ -1.32
CLIP1-205ENST00000514271 FAM199XQ6PEV8 388 aaPredicted RBP6.83□□□□□ -1.32
CLIP1-205ENST00000514271 TMEM220Q6QAJ8 160 aa6.83□□□□□ -1.32
CLIP1-205ENST00000514271 RTL4Q6ZR62 310 aa6.83□□□□□ -1.32
CLIP1-205ENST00000514271 AMIGO1Q86WK6 493 aa6.83□□□□□ -1.32
CLIP1-205ENST00000514271 TMPRSS12Q86WS5 348 aa6.83□□□□□ -1.32
CLIP1-205ENST00000514271 PAQR4Q8N4S7 273 aaPredicted RBP6.83□□□□□ -1.32
CLIP1-205ENST00000514271 DEFB119Q8N690 84 aa6.83□□□□□ -1.32
CLIP1-205ENST00000514271 OR4Q3Q8NH05 313 aa6.83□□□□□ -1.32
CLIP1-205ENST00000514271 ZDHHC1Q8WTX9 485 aa6.83□□□□□ -1.32
CLIP1-205ENST00000514271 SLC38A5Q8WUX1 472 aa6.83□□□□□ -1.32
CLIP1-205ENST00000514271 CEP19Q96LK0 163 aa6.83□□□□□ -1.32
CLIP1-205ENST00000514271 OR2AG1Q9H205 316 aa6.83□□□□□ -1.32
CLIP1-205ENST00000514271 AMBNQ9NP70 447 aa6.83□□□□□ -1.32
CLIP1-205ENST00000514271 VPS29Q9UBQ0 182 aa6.83□□□□□ -1.32
CLIP1-205ENST00000514271 EXPH5Q8NEV8 1989 aa6.83□□□□□ -1.32
CLIP1-205ENST00000514271 ADAMTS20P59510 1910 aa6.83□□□□□ -1.32
CLIP1-205ENST00000514271 LOC102723532A0A0G2JNH3 316 aa6.83□□□□□ -1.32
CLIP1-205ENST00000514271 TMEM8BA6NDV4 472 aa6.83□□□□□ -1.32
CLIP1-205ENST00000514271 ZNF593O00488 134 aaPredicted RBP6.83□□□□□ -1.32
CLIP1-205ENST00000514271 FFAR3O14843 346 aa6.83□□□□□ -1.32
CLIP1-205ENST00000514271 GPR42O15529 346 aa6.83□□□□□ -1.32
CLIP1-205ENST00000514271 ECDO95905 644 aaPredicted RBP6.83□□□□□ -1.32
CLIP1-205ENST00000514271 POU2F1P14859 743 aa6.83□□□□□ -1.32
CLIP1-205ENST00000514271 PSMA1P25786 263 aaKnown RBP6.83□□□□□ -1.32
CLIP1-205ENST00000514271 SLC1A3P43003 542 aa6.83□□□□□ -1.32
CLIP1-205ENST00000514271 TAP2Q03519 686 aa6.83□□□□□ -1.32
CLIP1-205ENST00000514271 ZNF124Q15973 351 aa6.83□□□□□ -1.32
CLIP1-205ENST00000514271 ETFDHQ16134 617 aa6.83□□□□□ -1.32
CLIP1-205ENST00000514271 SYTL3Q4VX76 610 aa6.83□□□□□ -1.32
CLIP1-205ENST00000514271 LRRC73Q5JTD7 316 aa6.83□□□□□ -1.32
CLIP1-205ENST00000514271 ANXA8L1Q5VT79 327 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms