RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 VDAC3Q9Y277 283 aa9.21□□□□□ -0.94
NEDD9-214ENST00000513989 C7orf72A4D263 438 aa9.2□□□□□ -0.94
NEDD9-214ENST00000513989 PINLYPA6NC86 204 aa9.2□□□□□ -0.94
NEDD9-214ENST00000513989 LRRC3CA6NJW4 275 aa9.2□□□□□ -0.94
NEDD9-214ENST00000513989 TMEM229AB2RXF0 380 aa9.2□□□□□ -0.94
NEDD9-214ENST00000513989 hCG_2039718K7EN88 272 aa9.2□□□□□ -0.94
NEDD9-214ENST00000513989 ADAMDEC1O15204 470 aa9.2□□□□□ -0.94
NEDD9-214ENST00000513989 OIP5O43482 229 aa9.2□□□□□ -0.94
NEDD9-214ENST00000513989 SUSD5O60279 629 aa9.2□□□□□ -0.94
NEDD9-214ENST00000513989 ZIC3O60481 467 aa9.2□□□□□ -0.94
NEDD9-214ENST00000513989 FKBP6O75344 327 aa9.2□□□□□ -0.94
NEDD9-214ENST00000513989 BCAS1O75363 584 aaPredicted RBP9.2□□□□□ -0.94
NEDD9-214ENST00000513989 EPPINO95925 133 aa9.2□□□□□ -0.94
NEDD9-214ENST00000513989 RFPL3SP0C7P2 107 aa9.2□□□□□ -0.94
NEDD9-214ENST00000513989 PRG2P13727 222 aa9.2□□□□□ -0.94
NEDD9-214ENST00000513989 CHMP24386 653 aa9.2□□□□□ -0.94
NEDD9-214ENST00000513989 MAGEA5P43359 124 aa9.2□□□□□ -0.94
NEDD9-214ENST00000513989 ARHGDIAP52565 204 aa9.2□□□□□ -0.94
NEDD9-214ENST00000513989 ZNF136P52737 540 aa9.2□□□□□ -0.94
NEDD9-214ENST00000513989 MERTKQ12866 999 aa9.2□□□□□ -0.94
NEDD9-214ENST00000513989 CCNIQ14094 377 aa9.2□□□□□ -0.94
NEDD9-214ENST00000513989 PRR30Q53SZ7 412 aaPredicted RBP9.2□□□□□ -0.94
NEDD9-214ENST00000513989 ALG10BQ5I7T1 473 aa9.2□□□□□ -0.94
NEDD9-214ENST00000513989 PDSS1Q5T2R2 415 aa9.2□□□□□ -0.94
NEDD9-214ENST00000513989 SWT1Q5T5J6 900 aaKnown RBP9.2□□□□□ -0.94
NEDD9-214ENST00000513989 YRDCQ86U90 279 aaKnown RBP9.2□□□□□ -0.94
NEDD9-214ENST00000513989 RBM45Q8IUH3 476 aaKnown RBP9.2□□□□□ -0.94
NEDD9-214ENST00000513989 ADGRG5Q8IZF4 528 aa9.2□□□□□ -0.94
NEDD9-214ENST00000513989 GTPBP8Q8N3Z3 284 aaPredicted RBP9.2□□□□□ -0.94
NEDD9-214ENST00000513989 CISD2Q8N5K1 135 aaKnown RBP9.2□□□□□ -0.94
NEDD9-214ENST00000513989 Q8NA96 180 aa9.2□□□□□ -0.94
NEDD9-214ENST00000513989 PIK3C3Q8NEB9 887 aa9.2□□□□□ -0.94
NEDD9-214ENST00000513989 FAM83FQ8NEG4 500 aaPredicted RBP9.2□□□□□ -0.94
NEDD9-214ENST00000513989 ADAMTS16Q8TE57 1224 aa9.2□□□□□ -0.94
NEDD9-214ENST00000513989 DUS3LQ96G46 650 aaKnown RBP9.2□□□□□ -0.94
NEDD9-214ENST00000513989 SLC41A3Q96GZ6 507 aa9.2□□□□□ -0.94
NEDD9-214ENST00000513989 MPP4Q96JB8 637 aa9.2□□□□□ -0.94
NEDD9-214ENST00000513989 C7orf34Q96L11 122 aa9.2□□□□□ -0.94
NEDD9-214ENST00000513989 HS6ST2Q96MM7 605 aa9.2□□□□□ -0.94
NEDD9-214ENST00000513989 SFXN2Q96NB2 322 aa9.2□□□□□ -0.94
NEDD9-214ENST00000513989 ZNF300Q96RE9 604 aaPredicted RBP9.2□□□□□ -0.94
NEDD9-214ENST00000513989 PIP5K1AQ99755 562 aa9.2□□□□□ -0.94
NEDD9-214ENST00000513989 OR2B2Q9GZK3 357 aa9.2□□□□□ -0.94
NEDD9-214ENST00000513989 ADAM19Q9H013 955 aa9.2□□□□□ -0.94
NEDD9-214ENST00000513989 DEFB127Q9H1M4 99 aa9.2□□□□□ -0.94
NEDD9-214ENST00000513989 UBQLN3Q9H347 655 aa9.2□□□□□ -0.94
NEDD9-214ENST00000513989 ZNF703Q9H7S9 590 aaPredicted RBP9.2□□□□□ -0.94
NEDD9-214ENST00000513989 ARMC1Q9NVT9 282 aa9.2□□□□□ -0.94
NEDD9-214ENST00000513989 NDUFAF4Q9P032 175 aa9.2□□□□□ -0.94
NEDD9-214ENST00000513989 TMCC3Q9ULS5 477 aa9.2□□□□□ -0.94
NEDD9-214ENST00000513989 RPH3AQ9Y2J0 694 aaPredicted RBP9.2□□□□□ -0.94
NEDD9-214ENST00000513989 AP4B1Q9Y6B7 739 aa9.2□□□□□ -0.94
NEDD9-214ENST00000513989 TMED7-TICAM2A0A0A6YYA0 188 aa9.19□□□□□ -0.94
NEDD9-214ENST00000513989 TRGV5A0A0B4J1U4 118 aa9.19□□□□□ -0.94
NEDD9-214ENST00000513989 A0A1B0GWA3 101 aa9.19□□□□□ -0.94
NEDD9-214ENST00000513989 HTR3EA5X5Y0 456 aa9.19□□□□□ -0.94
NEDD9-214ENST00000513989 ELOA3DA6NLF2 546 aaPredicted RBP9.19□□□□□ -0.94
NEDD9-214ENST00000513989 CPSF4LA6NMK7 179 aaKnown RBP9.19□□□□□ -0.94
NEDD9-214ENST00000513989 NPIPA5E9PKD4 350 aa9.19□□□□□ -0.94
NEDD9-214ENST00000513989 ADAM10O14672 748 aa9.19□□□□□ -0.94
NEDD9-214ENST00000513989 DEAF1O75398 565 aaPredicted RBP9.19□□□□□ -0.94
NEDD9-214ENST00000513989 ACTL6AO96019 429 aa9.19□□□□□ -0.94
NEDD9-214ENST00000513989 CST1P01037 141 aa9.19□□□□□ -0.94
NEDD9-214ENST00000513989 H1F0P07305 194 aaKnown RBP9.19□□□□□ -0.94
NEDD9-214ENST00000513989 PRKCAP17252 672 aa9.19□□□□□ -0.94
NEDD9-214ENST00000513989 TNFRSF1BP20333 461 aa9.19□□□□□ -0.94
NEDD9-214ENST00000513989 GNLYP22749 145 aa9.19□□□□□ -0.94
NEDD9-214ENST00000513989 FASP25445 335 aa9.19□□□□□ -0.94
NEDD9-214ENST00000513989 TACR3P29371 465 aa9.19□□□□□ -0.94
NEDD9-214ENST00000513989 IFNGR2P38484 337 aa9.19□□□□□ -0.94
NEDD9-214ENST00000513989 YAP1P46937 504 aaKnown RBP9.19□□□□□ -0.94
NEDD9-214ENST00000513989 CLK1P49759 484 aaKnown RBP9.19□□□□□ -0.94
NEDD9-214ENST00000513989 ERFP50548 548 aa9.19□□□□□ -0.94
NEDD9-214ENST00000513989 DLX5P56178 289 aa9.19□□□□□ -0.94
NEDD9-214ENST00000513989 PIN1Q13526 163 aaPredicted RBP9.19□□□□□ -0.94
NEDD9-214ENST00000513989 GK3PQ14409 553 aa9.19□□□□□ -0.94
NEDD9-214ENST00000513989 TRAM2Q15035 370 aa9.19□□□□□ -0.94
NEDD9-214ENST00000513989 SF3B4Q15427 424 aaKnown RBP eCLIP9.19□□□□□ -0.94
NEDD9-214ENST00000513989 TOMM34Q15785 309 aaPredicted RBP9.19□□□□□ -0.94
NEDD9-214ENST00000513989 PLPPR5Q32ZL2 321 aa9.19□□□□□ -0.94
NEDD9-214ENST00000513989 ELOA3BQ3SY89 546 aa9.19□□□□□ -0.94
NEDD9-214ENST00000513989 SLC25A53Q5H9E4 307 aa9.19□□□□□ -0.94
NEDD9-214ENST00000513989 TTC33Q6PID6 262 aaPredicted RBP9.19□□□□□ -0.94
NEDD9-214ENST00000513989 LACC1Q8IV20 430 aa9.19□□□□□ -0.94
NEDD9-214ENST00000513989 CDK20Q8IZL9 346 aa9.19□□□□□ -0.94
NEDD9-214ENST00000513989 FAM86B1Q8N7N1 296 aa9.19□□□□□ -0.94
NEDD9-214ENST00000513989 PAPD5Q8NDF8 572 aaKnown RBP9.19□□□□□ -0.94
NEDD9-214ENST00000513989 ELOA3Q8NG57 546 aa9.19□□□□□ -0.94
NEDD9-214ENST00000513989 SLC25A43Q8WUT9 341 aaPredicted RBP9.19□□□□□ -0.94
NEDD9-214ENST00000513989 FAR1Q8WVX9 515 aa9.19□□□□□ -0.94
NEDD9-214ENST00000513989 SLC38A4Q969I6 547 aa9.19□□□□□ -0.94
NEDD9-214ENST00000513989 ABTB1Q969K4 478 aaPredicted RBP9.19□□□□□ -0.94
NEDD9-214ENST00000513989 DDIT4LQ96D03 193 aa9.19□□□□□ -0.94
NEDD9-214ENST00000513989 PRRC1Q96M27 445 aa9.19□□□□□ -0.94
NEDD9-214ENST00000513989 BDH2Q9BUT1 245 aa9.19□□□□□ -0.94
NEDD9-214ENST00000513989 ANKRD19PQ9H560 264 aa9.19□□□□□ -0.94
NEDD9-214ENST00000513989 ZDHHC11Q9H8X9 412 aa9.19□□□□□ -0.94
NEDD9-214ENST00000513989 NMNAT1Q9HAN9 279 aaPredicted RBP9.19□□□□□ -0.94
NEDD9-214ENST00000513989 KRCC1Q9NPI7 259 aaPredicted RBP9.19□□□□□ -0.94
NEDD9-214ENST00000513989 NPIPA1Q9UND3 350 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms