RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 PAQR6Q6TCH4 344 aa10.52□□□□□ -0.72
TCOF1-211ENST00000513346 ZER1Q7Z7L7 766 aa10.52□□□□□ -0.72
TCOF1-211ENST00000513346 ADGRG3Q86Y34 549 aa10.52□□□□□ -0.72
TCOF1-211ENST00000513346 SPNS2Q8IVW8 549 aa10.52□□□□□ -0.72
TCOF1-211ENST00000513346 L3MBTL4Q8NA19 623 aa10.52□□□□□ -0.72
TCOF1-211ENST00000513346 OR14K1Q8NGZ2 314 aa10.52□□□□□ -0.72
TCOF1-211ENST00000513346 OR4K13Q8NH42 304 aa10.52□□□□□ -0.72
TCOF1-211ENST00000513346 HCAR2Q8TDS4 363 aa10.52□□□□□ -0.72
TCOF1-211ENST00000513346 DUSP19Q8WTR2 217 aa10.52□□□□□ -0.72
TCOF1-211ENST00000513346 ZBTB8AQ96BR9 441 aa10.52□□□□□ -0.72
TCOF1-211ENST00000513346 ZNF689Q96CS4 500 aaPredicted RBP10.52□□□□□ -0.72
TCOF1-211ENST00000513346 ZDHHC12Q96GR4 267 aa10.52□□□□□ -0.72
TCOF1-211ENST00000513346 CRB3Q9BUF7 120 aa10.52□□□□□ -0.72
TCOF1-211ENST00000513346 SLC46A2Q9BY10 475 aa10.52□□□□□ -0.72
TCOF1-211ENST00000513346 OR8D2Q9GZM6 311 aa10.52□□□□□ -0.72
TCOF1-211ENST00000513346 GFOD1Q9NXC2 390 aa10.52□□□□□ -0.72
TCOF1-211ENST00000513346 GRHPRQ9UBQ7 328 aa10.52□□□□□ -0.72
TCOF1-211ENST00000513346 NPFFR2Q9Y5X5 522 aa10.52□□□□□ -0.72
TCOF1-211ENST00000513346 RAB19A4D1S5 217 aa10.52□□□□□ -0.73
TCOF1-211ENST00000513346 GJB3O75712 270 aa10.52□□□□□ -0.73
TCOF1-211ENST00000513346 ACSM4P0C7M7 580 aa10.52□□□□□ -0.73
TCOF1-211ENST00000513346 PRR35P0CG20 571 aa10.52□□□□□ -0.73
TCOF1-211ENST00000513346 CD79BP40259 229 aa10.52□□□□□ -0.73
TCOF1-211ENST00000513346 PBX2P40425 430 aa10.52□□□□□ -0.73
TCOF1-211ENST00000513346 RGRP47804 291 aa10.52□□□□□ -0.73
TCOF1-211ENST00000513346 DUSP3P51452 185 aaPredicted RBP10.52□□□□□ -0.73
TCOF1-211ENST00000513346 TNFRSF17Q02223 184 aa10.52□□□□□ -0.73
TCOF1-211ENST00000513346 NUMA1Q14980 2115 aa10.52□□□□□ -0.73
TCOF1-211ENST00000513346 FXNQ16595 210 aa10.52□□□□□ -0.73
TCOF1-211ENST00000513346 TMEM107Q6UX40 140 aa10.52□□□□□ -0.73
TCOF1-211ENST00000513346 GAREM2Q75VX8 874 aa10.52□□□□□ -0.73
TCOF1-211ENST00000513346 TMEM150AQ86TG1 271 aa10.52□□□□□ -0.73
TCOF1-211ENST00000513346 GLB1L2Q8IW92 636 aa10.52□□□□□ -0.73
TCOF1-211ENST00000513346 FAM26EQ8N5C1 309 aa10.52□□□□□ -0.73
TCOF1-211ENST00000513346 STEAP2Q8NFT2 490 aa10.52□□□□□ -0.73
TCOF1-211ENST00000513346 OR4K14Q8NGD5 310 aa10.52□□□□□ -0.73
TCOF1-211ENST00000513346 OR5AK2Q8NH90 309 aa10.52□□□□□ -0.73
TCOF1-211ENST00000513346 ABHD4Q8TB40 342 aa10.52□□□□□ -0.73
TCOF1-211ENST00000513346 NXPE3Q969Y0 559 aa10.52□□□□□ -0.73
TCOF1-211ENST00000513346 TBC1D20Q96BZ9 403 aa10.52□□□□□ -0.73
TCOF1-211ENST00000513346 MMABQ96EY8 250 aaPredicted RBP10.52□□□□□ -0.73
TCOF1-211ENST00000513346 DPH7Q9BTV6 452 aa10.52□□□□□ -0.73
TCOF1-211ENST00000513346 C1QTNF2Q9BXJ5 285 aa10.52□□□□□ -0.73
TCOF1-211ENST00000513346 KLF16Q9BXK1 252 aaPredicted RBP10.52□□□□□ -0.73
TCOF1-211ENST00000513346 TPSD1Q9BZJ3 242 aa10.52□□□□□ -0.73
TCOF1-211ENST00000513346 HRH4Q9H3N8 390 aa10.52□□□□□ -0.73
TCOF1-211ENST00000513346 TMEM38AQ9H6F2 299 aa10.52□□□□□ -0.73
TCOF1-211ENST00000513346 SCPEP1Q9HB40 452 aa10.52□□□□□ -0.73
TCOF1-211ENST00000513346 HHATLQ9HCP6 504 aa10.52□□□□□ -0.73
TCOF1-211ENST00000513346 PPT2Q9UMR5 302 aa10.52□□□□□ -0.73
TCOF1-211ENST00000513346 FAM221BA6H8Z2 402 aa10.52□□□□□ -0.73
TCOF1-211ENST00000513346 PEX12O00623 359 aa10.52□□□□□ -0.73
TCOF1-211ENST00000513346 XCR1P46094 333 aa10.52□□□□□ -0.73
TCOF1-211ENST00000513346 IRF4Q15306 451 aa10.52□□□□□ -0.73
TCOF1-211ENST00000513346 C14orf28Q4W4Y0 310 aa10.52□□□□□ -0.73
TCOF1-211ENST00000513346 SSX9Q7RTT3 188 aa10.52□□□□□ -0.73
TCOF1-211ENST00000513346 PGBD5Q8N414 524 aa10.52□□□□□ -0.73
TCOF1-211ENST00000513346 FOXJ1Q92949 421 aa10.52□□□□□ -0.73
TCOF1-211ENST00000513346 ISYNA1Q9NPH2 558 aa10.52□□□□□ -0.73
TCOF1-211ENST00000513346 KCNJ16Q9NPI9 418 aa10.52□□□□□ -0.73
TCOF1-211ENST00000513346 MEPEQ9NQ76 525 aaPredicted RBP10.52□□□□□ -0.73
TCOF1-211ENST00000513346 DMRT3Q9NQL9 472 aa10.52□□□□□ -0.73
TCOF1-211ENST00000513346 C1GALT1Q9NS00 363 aa10.52□□□□□ -0.73
TCOF1-211ENST00000513346 SGK494L7N484 410 aa10.51□□□□□ -0.73
TCOF1-211ENST00000513346 TAPBPO15533 448 aa10.51□□□□□ -0.73
TCOF1-211ENST00000513346 CEBPBP17676 345 aa10.51□□□□□ -0.73
TCOF1-211ENST00000513346 EPHA5P54756 1037 aa10.51□□□□□ -0.73
TCOF1-211ENST00000513346 NKX6-1P78426 367 aaPredicted RBP10.51□□□□□ -0.73
TCOF1-211ENST00000513346 PTPRRQ15256 657 aa10.51□□□□□ -0.73
TCOF1-211ENST00000513346 SYT14P1Q58G82 188 aa10.51□□□□□ -0.73
TCOF1-211ENST00000513346 C8orf82Q6P1X6 216 aaPredicted RBP10.51□□□□□ -0.73
TCOF1-211ENST00000513346 RABEPKQ7Z6M1 372 aa10.51□□□□□ -0.73
TCOF1-211ENST00000513346 HORMAD2Q8N7B1 307 aa10.51□□□□□ -0.73
TCOF1-211ENST00000513346 OR1M1Q8NGA1 313 aa10.51□□□□□ -0.73
TCOF1-211ENST00000513346 ZMYND19Q96E35 227 aaPredicted RBP10.51□□□□□ -0.73
TCOF1-211ENST00000513346 CMKLR1Q99788 373 aa10.51□□□□□ -0.73
TCOF1-211ENST00000513346 MTHFD2LQ9H903 347 aaPredicted RBP10.51□□□□□ -0.73
TCOF1-211ENST00000513346 C5AR2Q9P296 337 aa10.51□□□□□ -0.73
TCOF1-211ENST00000513346 NDRG3Q9UGV2 375 aa10.51□□□□□ -0.73
TCOF1-211ENST00000513346 DHDHQ9UQ10 334 aa10.51□□□□□ -0.73
TCOF1-211ENST00000513346 OR1A2Q9Y585 309 aa10.51□□□□□ -0.73
TCOF1-211ENST00000513346 HCFC2Q9Y5Z7 792 aa10.51□□□□□ -0.73
TCOF1-211ENST00000513346 BRWD3Q6RI45 1802 aa10.51□□□□□ -0.73
TCOF1-211ENST00000513346 A0A1B0GTL3 188 aa10.51□□□□□ -0.73
TCOF1-211ENST00000513346 C1orf226A1L170 272 aa10.51□□□□□ -0.73
TCOF1-211ENST00000513346 LGALS8O00214 317 aa10.51□□□□□ -0.73
TCOF1-211ENST00000513346 UPK1AO00322 258 aa10.51□□□□□ -0.73
TCOF1-211ENST00000513346 FRS3O43559 492 aa10.51□□□□□ -0.73
TCOF1-211ENST00000513346 LILRB3O75022 631 aa10.51□□□□□ -0.73
TCOF1-211ENST00000513346 CDC123O75794 336 aaPredicted RBP10.51□□□□□ -0.73
TCOF1-211ENST00000513346 S100A8P05109 93 aa10.51□□□□□ -0.73
TCOF1-211ENST00000513346 HOXC13P31276 330 aa10.51□□□□□ -0.73
TCOF1-211ENST00000513346 CCR7P32248 378 aa10.51□□□□□ -0.73
TCOF1-211ENST00000513346 DSC1Q08554 894 aa10.51□□□□□ -0.73
TCOF1-211ENST00000513346 SGCBQ16585 318 aa10.51□□□□□ -0.73
TCOF1-211ENST00000513346 COX20Q5RI15 118 aa10.51□□□□□ -0.73
TCOF1-211ENST00000513346 PNLDC1Q8NA58 520 aaKnown RBP10.51□□□□□ -0.73
TCOF1-211ENST00000513346 CHTF18Q8WVB6 975 aa10.51□□□□□ -0.73
TCOF1-211ENST00000513346 ASB11Q8WXH4 323 aa10.51□□□□□ -0.73
TCOF1-211ENST00000513346 FGF13Q92913 245 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms